Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL954U10010 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 3.1e-42 175.3 128 100.0
AL8G23340 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 6.5e-40 167.5 128 93.0
AT5G49550 Arabidopsis thaliana HOM05D006288 ORTHO05D007416 1.1e-39 166.8 128 93.0
CARHR287980 Cardamine hirsuta HOM05D006288 ORTHO05D007416 6.3e-35 151.0 128 84.4
Carub.0008s0943 Capsella rubella HOM05D006288 ORTHO05D007416 8.2e-35 150.6 124 77.4
Thhalv10005135m.g Eutrema salsugineum HOM05D006288 ORTHO05D007416 1.4e-34 149.8 124 87.9
Sp2g19860 Schrenkiella parvula HOM05D006288 ORTHO05D007416 2.4e-34 149.1 125 88.8
BcaB04g19620 Brassica carinata HOM05D006288 ORTHO05D007416 5.9e-33 144.4 125 84.0
A09p04890 Brassica napus HOM05D006288 ORTHO05D007416 2.2e-32 142.5 125 84.0
BraA09t36127Z Brassica rapa HOM05D006288 ORTHO05D007416 8.5e-32 140.6 125 83.2
BcaC04g23731 Brassica carinata HOM05D006288 ORTHO05D007416 1.1e-31 140.2 114 91.2
C09p05280 Brassica napus HOM05D006288 ORTHO05D007416 1.1e-31 140.2 114 91.2
Aa31LG7G12050 Aethionema arabicum HOM05D006288 ORTHO05D007416 9.7e-28 127.1 112 73.2
C07p39960 Brassica napus HOM05D006288 ORTHO05D007416 2.2e-27 125.9 110 64.5
BolC7t44529H Brassica oleracea HOM05D006288 ORTHO05D007416 2.2e-27 125.9 110 64.5
BraA06t26742Z Brassica rapa HOM05D006288 ORTHO05D007416 6.3e-27 124.4 77 84.4
THA.LOC104805112 Tarenaya hassleriana HOM05D006288 ORTHO05D007416 6.3e-27 124.4 112 59.8
Cpa.g.sc14.255 Carica papaya HOM05D006288 ORTHO05D007416 2.9e-24 115.5 111 55.0
Gohir.D12G056100 Gossypium hirsutum HOM05D006288 ORTHO05D007416 4.2e-23 111.7 109 55.0
Gorai.008G059200 Gossypium raimondii HOM05D006288 ORTHO05D007416 4.2e-23 111.7 109 55.0
Cfa007713 Carpinus fangiana HOM05D006288 ORTHO05D007416 1.6e-22 109.8 108 53.7
Gohir.A12G056700 Gossypium hirsutum HOM05D006288 ORTHO05D007416 2.1e-22 109.4 109 54.1
Duzib133G0644 Durio zibethinus HOM05D006288 ORTHO05D007416 2.7e-22 109.0 109 53.2
Duzib133G1254 Durio zibethinus HOM05D006288 ORTHO05D007416 2.7e-22 109.0 109 53.2
CiPaw.03G081300 Carya illinoinensis HOM05D006288 ORTHO05D007416 3.6e-22 108.6 109 50.5
Lj3g0015520 Lotus japonicus HOM05D006288 ORTHO05D007416 1.0e-21 107.1 108 50.9
Medtr3g034300 Medicago truncatula HOM05D006288 ORTHO05D007416 1.0e-21 107.1 108 50.0
RcHm_v2.0_Chr2g0164421 Rosa chinensis HOM05D006288 ORTHO05D007416 3.0e-21 105.5 110 50.0
Thecc.10G108100 Theobroma cacao HOM05D005170 ORTHO05D007416 3.0e-21 105.5 108 52.8
FAN14G1171 Fragaria x ananassa HOM05D006288 ORTHO05D007416 5.2e-21 104.8 111 63.1
Oeu007090.1 Olea europaea HOM05D006288 ORTHO05D007416 5.2e-21 104.8 110 51.8
PGR004G0851 Punica granatum HOM05D006288 ORTHO05D007416 5.2e-21 104.8 109 50.5
GSVIVG01036516001 Vitis vinifera HOM05D006288 ORTHO05D007416 5.2e-21 104.8 111 52.3
Glyma.19G037000 Glycine max HOM05D006288 ORTHO05D007416 6.7e-21 104.4 109 49.5
Prupe.3G247000 Prunus persica HOM05D006288 ORTHO05D007416 6.7e-21 104.4 111 50.5
Lalb_Chr21g0318141 Lupinus albus HOM05D006288 ORTHO05D007416 1.1e-20 103.6 108 50.0
Psat5g210920 Pisum sativum HOM05D006288 ORTHO05D007416 1.1e-20 103.6 107 48.6
Glyma.13G051400 Glycine max HOM05D006288 ORTHO05D007416 1.5e-20 103.2 72 69.4
Actinidia26277 Actinidia chinensis HOM05D006288 ORTHO05D007416 2.0e-20 102.8 72 68.1
MD17G1067500 Malus domestica HOM05D006288 ORTHO05D007416 2.0e-20 102.8 111 48.6
Manes.01G106000 Manihot esculenta HOM05D006288 ORTHO05D007416 2.0e-20 102.8 109 48.6
Psat5g210840 Pisum sativum HOM05D006288 ORTHO05D007416 2.0e-20 102.8 107 48.6
vmacro18118 Vaccinium macrocarpon HOM05D006288 ORTHO05D007416 2.0e-20 102.8 72 69.4
Atru.chr8.595 Acer truncatum HOM05D006288 ORTHO05D007416 2.6e-20 102.4 111 48.6
CANSAT64G2264 Cannabis sativa HOM05D005170 ORTHO05D007416 3.3e-20 102.1 72 69.4
Ca_13697_v3 Cicer arietinum L. HOM05D006288 ORTHO05D007416 4.4e-20 101.7 71 70.4
Dinv34894 Davidia involucrata HOM05D006288 ORTHO05D007416 4.4e-20 101.7 72 69.4
Manes.02G062500 Manihot esculenta HOM05D006288 ORTHO05D007416 4.4e-20 101.7 109 47.7
Phvul.004G044700 Phaseolus vulgaris HOM05D006288 ORTHO05D007416 4.4e-20 101.7 107 49.5
Rhsim10G0068900 Rhododendron simsii HOM05D006288 ORTHO05D007416 5.7e-20 101.3 108 49.1
CsaV3_4G009920 Cucumis sativus L. HOM05D006288 ORTHO05D007416 7.4e-20 100.9 73 65.8
Hma1.2p1_0304F.1_g119265 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 7.4e-20 100.9 108 51.9
Hma1.2p1_0304F.1_g119270 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 7.4e-20 100.9 108 51.9
PSO832G2920 Papaver somniferum HOM05D006288 ORTHO05D007416 7.4e-20 100.9 107 49.5
TWI60G1717 Tripterygium wilfordii HOM05D006288 ORTHO05D007416 7.4e-20 100.9 110 49.1
Cc07_g04640 Coffea canephora HOM05D006288 ORTHO05D007416 9.7e-20 100.5 107 51.4
Eucgr.F02878 Eucalyptus grandis HOM05D006288 ORTHO05D007416 9.7e-20 100.5 71 70.4
PSO210G6985 Papaver somniferum HOM05D006288 ORTHO05D007416 9.7e-20 100.5 107 48.6
Hund16253 Selenicereus undatus HOM05D006288 ORTHO05D007416 9.7e-20 100.5 74 66.2
Nn4g23570 Nelumbo nucifera HOM05D006288 ORTHO05D007416 1.3e-19 100.1 108 66.7
PSO675G0562 Papaver somniferum HOM05D006288 ORTHO05D007416 1.3e-19 100.1 107 48.6
Sc11g0008960 Simmondsia chinensis HOM05D006288 ORTHO05D007416 1.3e-19 100.1 107 47.7
TPR.G14566 Trifolium pratense HOM05D006288 ORTHO05D007416 1.3e-19 100.1 107 49.5
ATR0691G027 Amborella trichopoda HOM05D006288 ORTHO05D007416 1.7e-19 99.8 110 46.4
MELO3C018910.2 Cucumis melo HOM05D006288 ORTHO05D007416 1.7e-19 99.8 73 64.4
Migut.K00879 Erythranthe guttata HOM05D006288 ORTHO05D007416 1.7e-19 99.8 108 50.0
QL09p029462 Quercus lobata HOM05D006288 ORTHO05D007416 1.7e-19 99.8 108 48.1
Rhsim08G0078400 Rhododendron simsii HOM05D006288 ORTHO05D007416 1.7e-19 99.8 72 65.3
Actinidia17612 Actinidia chinensis HOM05D006288 ORTHO05D007416 2.2e-19 99.4 70 68.6
PSO541G1058 Papaver somniferum HOM05D006288 ORTHO05D007416 2.2e-19 99.4 107 49.5
TAR629G2245 Trochodendron aralioides HOM05D006288 ORTHO05D007416 2.2e-19 99.4 108 48.1
FAN02G0987 Fragaria x ananassa HOM05D006288 ORTHO05D007416 2.8e-19 99.0 72 66.7
FAN05G5526 Fragaria x ananassa HOM05D006288 ORTHO05D007416 2.8e-19 99.0 73 65.8
FAN09G1057 Fragaria x ananassa HOM05D010582 ORTHO05D007416 2.8e-19 99.0 72 66.7
MD09G1077100 Malus domestica HOM05D006288 ORTHO05D007416 2.8e-19 99.0 74 66.2
Sabra17G0089200 Salix brachista HOM05D006288 ORTHO05D007416 2.8e-19 99.0 72 68.1
VMungo0464G1523 Vigna mungo HOM05D006288 ORTHO05D007416 2.8e-19 99.0 71 67.6
CSS0015874 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 3.7e-19 98.6 72 68.1
CSS0028097 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 3.7e-19 98.6 72 68.1
FAN10G3625 Fragaria x ananassa HOM05D006288 ORTHO05D007416 3.7e-19 98.6 74 63.5
Psat5g212400 Pisum sativum HOM05D006288 ORTHO05D007416 3.7e-19 98.6 71 64.8
Potri.017G106200 Populus trichocarpa HOM05D006288 ORTHO05D007416 3.7e-19 98.6 72 66.7
arahy.Tifrunner.gnm1.ann1.J0I6JM Arachis hypogaea HOM05D006288 ORTHO05D007416 1.1e-18 97.1 72 65.3
ClCG07G016140 Citrullus lanatus HOM05D006288 ORTHO05D007416 1.1e-18 97.1 73 63.0
CAN.G93.47 Capsicum annuum HOM05D006288 ORTHO05D007416 1.4e-18 96.7 110 61.8
Peaxi162Scf00019g00316 Petunia axillaris HOM05D006288 ORTHO05D007416 1.4e-18 96.7 108 48.1
Sed0021882 Sechium edule HOM05D006288 ORTHO05D007416 1.8e-18 96.3 72 65.3
Ah.16g100880 Amaranthus hybridus HOM05D006288 ORTHO05D007416 3.1e-18 95.5 70 65.7
CSS0016762 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 7.0e-18 94.4 72 63.9
CSS0029131 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 7.0e-18 94.4 107 49.5
CSS0047986 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 7.0e-18 94.4 72 63.9
Nitab4.5_0003203g0060 Nicotiana tabacum HOM05D006288 ORTHO05D007416 9.1e-18 94.0 72 63.9
Solyc02g065690.3 Solanum lycopersicum HOM05D006288 ORTHO05D007416 1.2e-17 93.6 108 46.3
Sopen02g015910 Solanum pennellii HOM05D006288 ORTHO05D007416 1.2e-17 93.6 108 46.3
Zm00001eb234970 Zea mays HOM05D006288 ORTHO05D007416 1.2e-17 93.6 72 62.5
FAN10G2886 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.6e-17 93.2 72 61.1
SGA_v2.0_scaffold30G12393 Striga asiatica HOM05D006288 ORTHO05D007416 1.6e-17 93.2 72 63.9
PGSC0003DMG400026550 Solanum tuberosum HOM05D006288 ORTHO05D007416 2.6e-17 92.4 108 45.4
EL10Ac2g04409 Beta vulgaris HOM05D006288 ORTHO05D007416 3.5e-17 92.0 74 60.8
FvH4_6g46100 Fragaria vesca HOM05D006288 ORTHO05D007416 4.5e-17 91.7 67 65.7
Os02g0190900 Oryza sativa ssp. japonica HOM05D006288 ORTHO05D007416 5.9e-17 91.3 72 62.5
CDE10G0042 Ceratophyllum demersum HOM05D006288 ORTHO05D007416 7.7e-17 90.9 72 59.7
ECA232G4388 Erigeron canadensis HOM05D006288 ORTHO05D007416 2.2e-16 89.4 107 64.5
SalBow7G0779 Salvia bowleyana HOM05D006288 ORTHO05D007416 2.2e-16 89.4 72 65.3
SEGI_23755 Sequoiadendron giganteum HOM05D006288 ORTHO05D007416 2.2e-16 89.4 104 45.2
AUR62023135 Chenopodium quinoa HOM05D006288 ORTHO05D007416 2.9e-16 89.0 71 57.7
Lsat_1_v5_gn_4_173980 Lactuca sativa HOM05D006288 ORTHO05D007416 3.8e-16 88.6 76 55.3
Lsat_1_v5_gn_4_174040 Lactuca sativa HOM05D006288 ORTHO05D007416 1.5e-15 86.7 112 41.1
FvH4_6g24710 Fragaria vesca HOM05D006288 ORTHO05D007416 3.2e-15 85.5 55 72.7
FAN14G4004 Fragaria x ananassa HOM05D006288 ORTHO05D007416 3.2e-15 85.5 55 72.7
unitig_32.g10759 Utricularia gibba HOM05D006288 ORTHO05D007416 4.2e-15 85.1 64 64.1
TAR371G0310 Trochodendron aralioides HOM05D006288 ORTHO05D007416 2.7e-14 82.4 72 55.6
HPP92_018391 Vanilla planifolia HOM05D006288 ORTHO05D007416 1.4e-13 80.1 72 58.3
SHI46878 Sapria himalayana HOM05D006288 ORTHO05D007416 1.8e-13 79.7 74 50.0
Atru.BG.156.p Acer truncatum HOM05D006288 ORTHO05D007416 4.0e-13 78.6 59 62.7
Pp3c21_3840 Physcomitrium patens HOM05D006288 ORTHO05D007416 2.6e-12 75.9 71 50.7
Eucgr.K01979 Eucalyptus grandis HOM05D006288 ORTHO05D007416 1.3e-11 73.6 73 60.3
HanXRQChr15g0464891 Helianthus annuus HOM05D006288 ORTHO05D007416 4.8e-11 71.6 55 61.8
Mapoly0015s0174 Marchantia polymorpha HOM05D006288 ORTHO05D007416 6.3e-11 71.2 71 47.9
AagrBONN_evm.TU.Sc2ySwM_344.2644 Anthoceros agrestis HOM05D006288 ORTHO05D007416 5.0e-08 61.6 63 49.2
DCAR_011002 Daucus carota HOM05D006288 ORTHO05D007416 1.1e-07 60.5 73 42.5
Haze_03283 Corylus avellana HOM05D002280 ORTHO05D002322 1.9e-07 59.7 41 70.7
CARHR263050 Cardamine hirsuta HOM05D006288 ORTHO05D007416 2.5e-07 59.3 43 69.8
Nitab4.5_0002249g0090 Nicotiana tabacum HOM05D006288 ORTHO05D007416 7.2e-07 57.8 73 41.1
SMO358G0122 Selaginella moellendorffii HOM05D006288 ORTHO05D007416 1.2e-06 57.0 58 43.1
COL.COLO4_00228 Corchorus olitorius HOM05D006288 ORTHO05D007416 2.1e-06 56.2 74 39.2


User provided reference genes

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