Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL92U10060 Arabidopsis lyrata HOM05D007775 ORTHO05D009858 6.5e-111 404.1 202 100.0
AL4G36400 Arabidopsis lyrata HOM05D007775 ORTHO05D009858 1.8e-100 369.4 193 95.9
AT2G39100 Arabidopsis thaliana HOM05D007775 ORTHO05D009858 3.8e-87 325.1 176 93.2
Sp4g21450 Schrenkiella parvula HOM05D007775 ORTHO05D009858 8.3e-74 280.8 177 82.5
CARHR133870 Cardamine hirsuta HOM05D007775 ORTHO05D009858 1.0e-71 273.9 176 80.7
Carub.0004s2115 Capsella rubella HOM05D007775 ORTHO05D009858 2.9e-71 272.3 175 81.1
Thhalv10017000m.g Eutrema salsugineum HOM05D007775 ORTHO05D009858 9.5e-70 267.3 177 80.8
Aa31LG5G20500 Aethionema arabicum HOM05D007775 ORTHO05D009858 3.7e-66 255.4 177 74.6
C04p67030 Brassica napus HOM05D007775 ORTHO05D009858 2.0e-64 249.6 180 74.4
BolC4t28205H Brassica oleracea HOM05D007775 ORTHO05D009858 3.0e-63 245.7 182 73.6
BraA04t18439Z Brassica rapa HOM05D007775 ORTHO05D009858 1.3e-58 230.3 179 70.9
A04p29770 Brassica napus HOM05D007775 ORTHO05D009858 2.4e-57 226.1 169 71.0
THA.LOC104820248 Tarenaya hassleriana HOM05D007775 ORTHO05D009858 8.1e-53 211.1 180 60.6
BcaC02g12905 Brassica carinata HOM05D007775 ORTHO05D009858 6.4e-42 174.9 180 58.9
Ciclev10005542m.g Citrus clementina HOM05D007775 ORTHO05D009858 1.5e-38 163.7 184 47.8
Duzib151G1205 Durio zibethinus HOM05D007775 ORTHO05D009858 1.6e-37 160.2 180 45.6
Cpa.g.sc197.12 Carica papaya HOM05D007775 ORTHO05D009858 2.1e-37 159.8 182 49.5
Thecc.04G279800 Theobroma cacao HOM05D007775 ORTHO05D009858 1.8e-36 156.8 178 47.2
CiPaw.02G085200 Carya illinoinensis HOM05D007775 ORTHO05D009858 4.0e-36 155.6 185 48.1
MD13G1171700 Malus domestica HOM05D007775 ORTHO05D009858 1.2e-35 154.1 183 47.5
Prupe.1G140100 Prunus persica HOM05D007775 ORTHO05D009858 2.0e-35 153.3 180 47.8
Gohir.A10G161700 Gossypium hirsutum HOM05D007775 ORTHO05D009858 3.4e-35 152.5 185 44.9
QL06p007731 Quercus lobata HOM05D007775 ORTHO05D009858 4.4e-35 152.1 188 47.9
TWI09G0118 Tripterygium wilfordii HOM05D007775 ORTHO05D009858 4.4e-35 152.1 182 48.9
Dinv38311 Davidia involucrata HOM05D007775 ORTHO05D009858 5.8e-35 151.8 180 45.6
Atru.chr4.2786 Acer truncatum HOM05D007775 ORTHO05D009858 9.9e-35 151.0 183 45.4
Cfa015361 Carpinus fangiana HOM05D007775 ORTHO05D009858 9.9e-35 151.0 186 48.4
CANSAT78G0244 Cannabis sativa HOM05D007775 ORTHO05D009858 4.9e-34 148.7 176 45.5
Gohir.D10G168200 Gossypium hirsutum HOM05D007775 ORTHO05D009858 4.9e-34 148.7 179 42.5
Gorai.011G187800 Gossypium raimondii HOM05D007775 ORTHO05D009858 1.9e-33 146.7 185 42.7
RcHm_v2.0_Chr4g0421471 Rosa chinensis HOM05D007775 ORTHO05D009858 3.2e-33 146.0 179 45.3
COL.COLO4_13909 Corchorus olitorius HOM05D007775 ORTHO05D009858 5.4e-33 145.2 180 43.3
GSVIVG01017782001 Vitis vinifera HOM05D007775 ORTHO05D009858 5.4e-33 145.2 179 43.0
PGR031G0649 Punica granatum HOM05D007775 ORTHO05D009858 1.6e-32 143.7 168 47.6
FAN07G2931 Fragaria x ananassa HOM05D007775 ORTHO05D009858 2.1e-32 143.3 177 42.4
FvH4_4g17570 Fragaria vesca HOM05D007775 ORTHO05D009858 3.5e-32 142.5 177 42.4
FAN12G2546 Fragaria x ananassa HOM05D007775 ORTHO05D009858 3.5e-32 142.5 177 42.4
TAR362G1316 Trochodendron aralioides HOM05D007775 ORTHO05D009858 4.6e-32 142.1 188 45.7
Eucgr.B01278 Eucalyptus grandis HOM05D007775 ORTHO05D009858 7.8e-32 141.4 148 53.4
Potri.008G215200 Populus trichocarpa HOM05D007775 ORTHO05D009858 1.9e-30 136.7 176 47.2
Manes.15G015200 Manihot esculenta HOM05D007775 ORTHO05D009858 1.3e-29 134.0 152 48.0
Lj6A671T60 Lonicera japonica HOM05D007775 ORTHO05D009858 2.1e-29 133.3 190 42.6
Actinidia40242 Actinidia chinensis HOM05D007775 ORTHO05D009858 6.2e-29 131.7 184 43.5
Sabra08G0155600 Salix brachista HOM05D007775 ORTHO05D009858 6.2e-29 131.7 119 57.1
MBI19_g01943_MAGBIO Magnolia biondii HOM05D007775 ORTHO05D009858 1.1e-28 131.0 195 41.0
Oeu021116.1 Olea europaea HOM05D007775 ORTHO05D009858 6.9e-28 128.3 188 41.5
Rhsim04G0218300 Rhododendron simsii HOM05D007775 ORTHO05D009858 4.5e-27 125.6 184 41.8
MELO3C021348.2 Cucumis melo HOM05D007775 ORTHO05D009858 1.1e-25 120.9 182 40.1
Lsat_1_v5_gn_5_52881 Lactuca sativa HOM05D007775 ORTHO05D009858 1.9e-25 120.2 161 41.6
PGSC0003DMG400030783 Solanum tuberosum HOM05D007775 ORTHO05D009858 3.2e-25 119.4 150 47.3
ClCG06G005300 Citrullus lanatus HOM05D007775 ORTHO05D009858 7.1e-25 118.2 182 39.6
Nn3g16301 Nelumbo nucifera HOM05D007775 ORTHO05D009858 7.1e-25 118.2 145 46.9
Solyc06g054580.4 Solanum lycopersicum HOM05D007775 ORTHO05D009858 1.2e-24 117.5 151 47.0
DCAR_024553 Daucus carota HOM05D007775 ORTHO05D009858 2.1e-24 116.7 168 39.3
Nitab4.5_0002148g0040 Nicotiana tabacum HOM05D007775 ORTHO05D009858 2.7e-24 116.3 180 41.1
Sopen06g019650 Solanum pennellii HOM05D007775 ORTHO05D009858 7.9e-24 114.8 183 42.1
Sc06g0007440 Simmondsia chinensis HOM05D007775 ORTHO05D009858 1.0e-23 114.4 141 42.6
ATR0706G202 Amborella trichopoda HOM05D007775 ORTHO05D009858 1.3e-23 114.0 137 46.7
Cc03_g02150 Coffea canephora HOM05D007775 ORTHO05D009858 1.8e-23 113.6 185 37.8
CsaV3_6G017340 Cucumis sativus L. HOM05D007775 ORTHO05D009858 2.3e-23 113.2 182 37.9
Nitab4.5_0001459g0060 Nicotiana tabacum HOM05D007775 ORTHO05D009858 2.3e-23 113.2 177 40.7
Ah.13g074550 Amaranthus hybridus HOM05D007775 ORTHO05D009858 1.5e-22 110.5 175 40.0
CAN.G256.16 Capsicum annuum HOM05D007775 ORTHO05D009858 1.5e-22 110.5 181 40.9
Sed0017003 Sechium edule HOM05D007775 ORTHO05D009858 1.5e-22 110.5 183 37.7
arahy.Tifrunner.gnm1.ann1.J8QG6N Arachis hypogaea HOM05D007775 ORTHO05D009858 4.3e-22 109.0 191 38.2
QL06p007898 Quercus lobata HOM05D007775 ORTHO05D009858 1.3e-21 107.5 117 52.1
HanXRQChr03g0080871 Helianthus annuus HOM05D007775 ORTHO05D009858 2.8e-21 106.3 108 50.0
arahy.Tifrunner.gnm1.ann1.KJPE0P Arachis hypogaea HOM05D007775 ORTHO05D009858 6.9e-20 101.7 204 36.8
Lalb_Chr13g0303771 Lupinus albus HOM05D007775 ORTHO05D009858 9.0e-20 101.3 197 35.5
Aqoxy2G03074 Aquilegia oxysepala HOM05D007775 ORTHO05D009858 7.6e-19 98.2 122 45.1
Haze_01245 Corylus avellana HOM05D007775 ORTHO05D009858 3.8e-18 95.9 144 41.7
ECA240G4119 Erigeron canadensis HOM05D007775 ORTHO05D009858 8.4e-18 94.7 181 36.5
Prupe.8G004900 Prunus persica HOM05D007775 ORTHO05D009858 8.4e-18 94.7 81 55.6
PSO210G6602 Papaver somniferum HOM05D007775 ORTHO05D009858 1.2e-16 90.9 191 35.6
FAN12G2785 Fragaria x ananassa HOM05D007775 ORTHO05D009858 1.5e-14 84.0 114 42.1
Peaxi162Scf00033g01324 Petunia axillaris HOM05D007775 ORTHO05D009858 3.3e-14 82.8 97 47.4
CSS0035717 Camellia sinensis var. sinensis HOM05D007775 ORTHO05D009858 2.0e-11 73.6 73 50.7
CSS0036115 Camellia sinensis var. sinensis HOM05D007775 ORTHO05D009858 2.0e-11 73.6 73 50.7
CSS0050081 Camellia sinensis var. sinensis HOM05D007775 ORTHO05D009858 2.0e-11 73.6 73 49.3
SMO147G0036 Selaginella moellendorffii HOM05D007775 ORTHO05D009858 3.4e-11 72.8 165 32.1
vmacro08108 Vaccinium macrocarpon HOM05D007775 ORTHO05D009858 1.9e-09 67.0 64 50.0
Pp3c21_11960 Physcomitrium patens HOM05D007775 ORTHO05D009858 1.0e-07 61.2 179 31.3
SEGI_15450 Sequoiadendron giganteum HOM05D007775 ORTHO05D009858 2.5e-06 56.6 98 32.7


User provided reference genes

Program Settings