Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL92U10050 Arabidopsis lyrata HOM05D005803 ORTHO05D008090 1.2e-56 223.0 120 100.0
AL4G36390 Arabidopsis lyrata HOM05D005803 ORTHO05D008090 3.5e-56 221.5 119 99.2
AT2G39090 Arabidopsis thaliana HOM05D005803 ORTHO05D008090 9.4e-49 196.8 130 84.6
Carub.0004s2114 Capsella rubella HOM05D005803 ORTHO05D008090 3.3e-46 188.3 130 81.5
Sp4g21440 Schrenkiella parvula HOM05D005803 ORTHO05D008090 3.3e-46 188.3 130 80.8
Thhalv10017916m.g Eutrema salsugineum HOM05D005803 ORTHO05D008090 4.3e-46 188.0 130 80.8
BcaB02g09144 Brassica carinata HOM05D005803 ORTHO05D008090 8.2e-45 183.7 130 79.2
BcaNung07183 Brassica carinata HOM05D005803 ORTHO05D008090 1.1e-44 183.3 133 78.2
A05p07190 Brassica napus HOM05D005803 ORTHO05D008090 2.4e-44 182.2 130 77.7
BraA05t19684Z Brassica rapa HOM05D005803 ORTHO05D008090 2.4e-44 182.2 130 77.7
CARHR133850 Cardamine hirsuta HOM05D005803 ORTHO05D008090 2.0e-43 179.1 131 79.4
THA.LOC104820247 Tarenaya hassleriana HOM05D005803 ORTHO05D008090 1.2e-40 169.9 130 70.8
BcaC02g12039 Brassica carinata HOM05D005803 ORTHO05D008090 2.6e-38 162.2 130 70.8
C04p08600 Brassica napus HOM05D005803 ORTHO05D008090 2.6e-38 162.2 130 70.8
BolC4t22455H Brassica oleracea HOM05D005803 ORTHO05D008090 2.6e-38 162.2 130 70.8
Cpa.g.sc1214.2 Carica papaya HOM05D005803 ORTHO05D008090 2.1e-32 142.5 130 62.3
Ciclev10004654m.g Citrus clementina HOM05D005803 ORTHO05D008090 8.0e-32 140.6 131 61.8
Cfa015360 Carpinus fangiana HOM05D005803 ORTHO05D008090 1.0e-31 140.2 130 61.5
Lj6g0003207 Lotus japonicus HOM05D005803 ORTHO05D008090 1.1e-30 136.7 130 57.7
Haze_01246 Corylus avellana HOM05D005803 ORTHO05D008090 1.5e-30 136.3 130 60.8
TAR365G0996 Trochodendron aralioides HOM05D005803 ORTHO05D008090 1.5e-30 136.3 131 61.8
Atru.chr4.2785 Acer truncatum HOM05D005803 ORTHO05D008090 2.0e-30 136.0 131 59.5
Sabra08G0155700 Salix brachista HOM05D005803 ORTHO05D008090 2.6e-30 135.6 130 61.5
Nitab4.5_0000644g0090 Nicotiana tabacum HOM05D005803 ORTHO05D008090 3.3e-30 135.2 145 55.9
Dinv44408 Davidia involucrata HOM05D005803 ORTHO05D008090 4.4e-30 134.8 131 58.8
Potri.008G215100 Populus trichocarpa HOM05D005803 ORTHO05D008090 4.4e-30 134.8 130 61.5
Potri.010G022100 Populus trichocarpa HOM05D005803 ORTHO05D008090 5.7e-30 134.4 130 61.5
QL06p007721 Quercus lobata HOM05D005803 ORTHO05D008090 5.7e-30 134.4 130 59.2
CAN.G223.20 Capsicum annuum HOM05D005803 ORTHO05D008090 7.4e-30 134.0 131 59.5
TWI09G0274 Tripterygium wilfordii HOM05D005803 ORTHO05D008090 1.7e-29 132.9 132 61.4
PGR031G1735 Punica granatum HOM05D005803 ORTHO05D008090 2.8e-29 132.1 131 61.1
Thecc.04G279700 Theobroma cacao HOM05D005803 ORTHO05D008090 2.8e-29 132.1 131 59.5
TPR.G29244 Trifolium pratense HOM05D005803 ORTHO05D008090 2.8e-29 132.1 122 60.7
Psat1g187960 Pisum sativum HOM05D005803 ORTHO05D008090 4.8e-29 131.3 130 56.9
GSVIVG01017783001 Vitis vinifera HOM05D005803 ORTHO05D008090 8.2e-29 130.6 131 59.5
TPR.G35525 Trifolium pratense HOM05D005803 ORTHO05D008090 1.1e-28 130.2 130 56.9
Phvul.006G162900 Phaseolus vulgaris HOM05D005803 ORTHO05D008090 1.4e-28 129.8 130 57.7
Gohir.A10G161600 Gossypium hirsutum HOM05D005803 ORTHO05D008090 1.8e-28 129.4 131 58.8
Gohir.D10G168100 Gossypium hirsutum HOM05D005803 ORTHO05D008090 1.8e-28 129.4 131 58.8
Gorai.011G187600 Gossypium raimondii HOM05D005803 ORTHO05D008090 1.8e-28 129.4 131 58.8
Glyma.13G216500 Glycine max HOM05D005803 ORTHO05D008090 2.4e-28 129.0 130 58.5
Manes.15G015300 Manihot esculenta HOM05D005803 ORTHO05D008090 2.4e-28 129.0 130 58.5
ClCG06G005310 Citrullus lanatus HOM05D005803 ORTHO05D008090 5.3e-28 127.9 130 55.4
Hma1.2p1_0698F.1_g205430 Hydrangea macrophylla HOM05D005803 ORTHO05D008090 5.3e-28 127.9 131 58.0
Aa31LG5G20510 Aethionema arabicum HOM05D005803 ORTHO05D008090 1.2e-27 126.7 130 59.2
MBI19_g01944_MAGBIO Magnolia biondii HOM05D005803 ORTHO05D008090 1.2e-27 126.7 131 58.8
CSS0017376 Camellia sinensis var. sinensis HOM05D005803 ORTHO05D008090 2.0e-27 125.9 131 56.5
CSS0035312 Camellia sinensis var. sinensis HOM05D005803 ORTHO05D008090 2.0e-27 125.9 131 56.5
Glyma.15G096000 Glycine max HOM05D005803 ORTHO05D008090 2.0e-27 125.9 130 57.7
Eucgr.B01277 Eucalyptus grandis HOM05D005803 ORTHO05D008090 3.5e-27 125.2 131 55.7
Solyc01g067490.4 Solanum lycopersicum HOM05D005803 ORTHO05D008090 3.5e-27 125.2 131 55.7
CsaV3_6G017350 Cucumis sativus L. HOM05D005803 ORTHO05D008090 4.5e-27 124.8 130 53.8
Peaxi162Scf00386g00615 Petunia axillaris HOM05D005803 ORTHO05D008090 4.5e-27 124.8 131 58.0
VMungo0540G0998 Vigna mungo HOM05D005803 ORTHO05D008090 4.5e-27 124.8 130 57.7
Actinidia40241 Actinidia chinensis HOM05D005803 ORTHO05D008090 5.9e-27 124.4 127 57.5
Sc19g0005000 Simmondsia chinensis HOM05D005803 ORTHO05D008090 7.7e-27 124.0 131 56.5
MD16G1173300 Malus domestica HOM05D005803 ORTHO05D008090 1.3e-26 123.2 130 56.9
Nn3g21354 Nelumbo nucifera HOM05D005803 ORTHO05D008090 1.3e-26 123.2 120 60.0
Sed0014775 Sechium edule HOM05D005803 ORTHO05D008090 2.2e-26 122.5 130 52.3
Sopen01g029400 Solanum pennellii HOM05D005803 ORTHO05D008090 2.9e-26 122.1 131 55.0
Prupe.1G140200 Prunus persica HOM05D005803 ORTHO05D008090 5.0e-26 121.3 130 55.4
Duzib151G0664 Durio zibethinus HOM05D005803 ORTHO05D008090 1.1e-25 120.2 124 58.1
Rhsim04G0218200 Rhododendron simsii HOM05D005803 ORTHO05D008090 1.1e-25 120.2 131 56.5
HanXRQChr13g0410111 Helianthus annuus HOM05D005803 ORTHO05D008090 1.5e-25 119.8 131 55.0
MD13G1171800 Malus domestica HOM05D005803 ORTHO05D008090 5.5e-25 117.9 130 54.6
Lsat_1_v5_gn_5_69681 Lactuca sativa HOM05D005803 ORTHO05D008090 1.2e-24 116.7 131 54.2
arahy.Tifrunner.gnm1.ann1.7QB25Q Arachis hypogaea HOM05D005803 ORTHO05D008090 1.6e-24 116.3 130 50.8
arahy.Tifrunner.gnm1.ann1.FSUI8I Arachis hypogaea HOM05D005803 ORTHO05D008090 1.6e-24 116.3 130 50.8
EL10Ac3g06553 Beta vulgaris HOM05D005803 ORTHO05D008090 2.1e-24 115.9 120 55.8
Cc03_g02160 Coffea canephora HOM05D005803 ORTHO05D008090 3.6e-24 115.2 129 55.8
HPP92_015179 Vanilla planifolia HOM05D005803 ORTHO05D008090 4.7e-24 114.8 133 55.6
DCAR_027096 Daucus carota HOM05D005803 ORTHO05D008090 8.0e-24 114.0 145 51.7
ECA240G2219 Erigeron canadensis HOM05D005803 ORTHO05D008090 1.0e-23 113.6 131 54.2
RcHm_v2.0_Chr4g0421441 Rosa chinensis HOM05D005803 ORTHO05D008090 1.0e-23 113.6 130 54.6
Lalb_Chr18g0055621 Lupinus albus HOM05D005803 ORTHO05D008090 1.8e-23 112.8 130 53.1
PSO832G0201 Papaver somniferum HOM05D005803 ORTHO05D008090 5.2e-23 111.3 131 51.9
FvH4_4g17530 Fragaria vesca HOM05D005803 ORTHO05D008090 8.8e-23 110.5 131 52.7
Ca_00559_v3 Cicer arietinum L. HOM05D005803 ORTHO05D008090 3.3e-22 108.6 130 49.2
ATR0706G085 Amborella trichopoda HOM05D005803 ORTHO05D008090 9.7e-22 107.1 130 46.2
PSO210G1989 Papaver somniferum HOM05D005803 ORTHO05D008090 2.8e-21 105.5 131 50.4
CiPaw.01G151500 Carya illinoinensis HOM05D005803 ORTHO05D008090 2.4e-20 102.4 130 48.5
FAN07G1352 Fragaria x ananassa HOM05D005803 ORTHO05D008090 2.4e-20 102.4 134 50.0
FAN12G0977 Fragaria x ananassa HOM05D005803 ORTHO05D008090 5.3e-20 101.3 126 51.6
MSTRG.3937 Avicennia marina HOM05D005803 ORTHO05D008090 9.1e-20 100.5 134 47.8
Migut.G00189 Erythranthe guttata HOM05D005803 ORTHO05D008090 3.5e-19 98.6 134 45.5
Lj6C671G13 Lonicera japonica HOM05D005803 ORTHO05D008090 4.5e-19 98.2 120 53.3
FAN12G3070 Fragaria x ananassa HOM05D005803 ORTHO05D008090 2.2e-18 95.9 129 50.4
CANSAT78G2259 Cannabis sativa HOM05D005803 ORTHO05D008090 5.0e-18 94.7 129 45.7
Medtr2g019850 Medicago truncatula HOM05D005803 ORTHO05D008090 6.5e-18 94.4 130 46.2
MELO3C021349.2 Cucumis melo HOM05D005803 ORTHO05D008090 1.2e-16 90.1 107 50.5
Mapoly0073s0077 Marchantia polymorpha HOM05D005803 ORTHO05D008090 1.4e-15 86.7 131 40.5
Hma1.2p1_2251F.1_g318130 Hydrangea macrophylla HOM05D005803 ORTHO05D008090 9.8e-14 80.5 118 44.1
Aqoxy5G00678 Aquilegia oxysepala HOM05D005803 ORTHO05D008090 2.8e-13 79.0 124 48.4
COL.COLO4_13910 Corchorus olitorius HOM05D005803 ORTHO05D008090 3.7e-13 78.6 119 45.4
Zm00001eb418180 Zea mays HOM05D005803 ORTHO05D008090 6.3e-13 77.8 131 37.4
SMO119G0467 Selaginella moellendorffii HOM05D005803 ORTHO05D008090 8.3e-13 77.4 132 36.4
Pp3c23_6980 Physcomitrium patens HOM05D005803 ORTHO05D008090 1.1e-12 77.0 130 37.7
Ah.13g074480 Amaranthus hybridus HOM05D005803 ORTHO05D008090 7.0e-12 74.3 113 47.8
FAN22G2255 Fragaria x ananassa HOM05D005803 ORTHO05D008090 7.7e-11 70.9 111 47.7
SEGI_04834 Sequoiadendron giganteum HOM05D005803 ORTHO05D008090 1.5e-09 66.6 48 62.5
vmacro22476 Vaccinium macrocarpon HOM05D005803 ORTHO05D008090 1.9e-09 66.2 68 58.8
AagrBONN_evm.TU.Sc2ySwM_228.1968 Anthoceros agrestis HOM05D005803 ORTHO05D008090 5.5e-09 64.7 134 36.6
CBR_g37168 Chara braunii HOM05D005803 ORTHO05D000048 5.5e-09 64.7 139 35.3
AUR62042651 Chenopodium quinoa HOM05D005803 ORTHO05D008090 1.2e-06 57.0 48 54.2


User provided reference genes

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