Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G45500 Arabidopsis lyrata HOM05D006610 ORTHO05D008447 6.5e-101 370.9 214 100.0
AT5G66090 Arabidopsis thaliana HOM05D006610 ORTHO05D008447 1.1e-76 290.4 216 79.2
CARHR281660 Cardamine hirsuta HOM05D006610 ORTHO05D008447 1.7e-72 276.6 215 76.3
Carub.0008s2842 Capsella rubella HOM05D006610 ORTHO05D008447 4.8e-72 275.0 218 75.7
Sp2g30600 Schrenkiella parvula HOM05D006610 ORTHO05D008447 1.3e-69 266.9 214 73.4
A02p44620 Brassica napus HOM05D006610 ORTHO05D008447 4.2e-68 261.9 215 71.6
BraA02t09378Z Brassica rapa HOM05D006610 ORTHO05D008447 4.2e-68 261.9 215 71.6
BolC2t12560H Brassica oleracea HOM05D006610 ORTHO05D008447 2.7e-67 259.2 218 71.6
Thhalv10004913m.g Eutrema salsugineum HOM05D006610 ORTHO05D008447 1.7e-64 250.0 216 68.5
THA.LOC104819168 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 2.2e-61 239.6 213 64.8
Atru.chr3.883 Acer truncatum HOM05D006610 ORTHO05D008447 1.0e-58 230.7 214 59.3
Atru.chr3.894 Acer truncatum HOM05D006610 ORTHO05D008447 1.0e-58 230.7 214 59.3
CSS0043605 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 2.3e-58 229.6 153 75.2
Rhsim08G0031200 Rhododendron simsii HOM05D006610 ORTHO05D008447 4.0e-58 228.8 152 75.7
arahy.Tifrunner.gnm1.ann1.UN150X Arachis hypogaea HOM05D006610 ORTHO05D008447 1.2e-57 227.3 215 58.6
Gohir.A02G173500 Gossypium hirsutum HOM05D006610 ORTHO05D008447 1.2e-57 227.3 153 75.2
Manes.02G109300 Manihot esculenta HOM05D006610 ORTHO05D008447 1.5e-57 226.9 217 60.4
PGR119G0279 Punica granatum HOM05D006610 ORTHO05D008447 2.6e-57 226.1 153 72.5
Potri.005G109100 Populus trichocarpa HOM05D006610 ORTHO05D008447 3.4e-57 225.7 226 61.5
Aa31LG1G14570 Aethionema arabicum HOM05D006610 ORTHO05D008447 4.4e-57 225.3 231 61.9
CAN.G890.6 Capsicum annuum HOM05D006610 ORTHO05D008447 5.7e-57 224.9 162 68.5
PGSC0003DMG400003653 Solanum tuberosum HOM05D006610 ORTHO05D008447 5.7e-57 224.9 161 68.9
TAR186G0001 Trochodendron aralioides HOM05D006610 ORTHO05D008447 5.7e-57 224.9 214 60.3
Duzib187G1817 Durio zibethinus HOM05D006610 ORTHO05D008447 7.5e-57 224.6 153 75.2
Gohir.D03G006400 Gossypium hirsutum HOM05D006610 ORTHO05D008447 7.5e-57 224.6 153 73.9
Nitab4.5_0001789g0060 Nicotiana tabacum HOM05D006610 ORTHO05D008447 7.5e-57 224.6 155 72.3
CSS0036095 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 9.8e-57 224.2 137 80.3
Prupe.7G173500 Prunus persica HOM05D006610 ORTHO05D008447 9.8e-57 224.2 152 73.0
Hma1.2p1_0315F.1_g122440 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 1.3e-56 223.8 215 58.6
Cc07_g11190 Coffea canephora HOM05D006610 ORTHO05D008447 1.7e-56 223.4 216 59.7
Sabra05G0089400 Salix brachista HOM05D006610 ORTHO05D008447 1.7e-56 223.4 225 56.9
COL.COLO4_22482 Corchorus olitorius HOM05D006610 ORTHO05D008447 2.2e-56 223.0 220 58.2
Actinidia28724 Actinidia chinensis HOM05D006610 ORTHO05D008447 2.8e-56 222.6 215 59.1
MD02G1124800 Malus domestica HOM05D006610 ORTHO05D008447 2.8e-56 222.6 176 68.8
Peaxi162Scf00328g00315 Petunia axillaris HOM05D006610 ORTHO05D008447 2.8e-56 222.6 147 73.5
THA.LOC104821342 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 4.8e-56 221.9 221 60.6
CDE09G0967 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 6.3e-56 221.5 151 74.8
AUR62003705 Chenopodium quinoa HOM05D006610 ORTHO05D008447 6.3e-56 221.5 151 73.5
HanXRQChr16g0531751 Helianthus annuus HOM05D006610 ORTHO05D008447 6.3e-56 221.5 137 78.1
Nitab4.5_0008552g0010 Nicotiana tabacum HOM05D006610 ORTHO05D008447 6.3e-56 221.5 214 55.6
vmacro18433 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 6.3e-56 221.5 151 73.5
AUR62018012 Chenopodium quinoa HOM05D006610 ORTHO05D008447 8.3e-56 221.1 151 73.5
ECA246G3062 Erigeron canadensis HOM05D006610 ORTHO05D008447 8.3e-56 221.1 137 77.4
Lj4A224G29 Lonicera japonica HOM05D006610 ORTHO05D008447 8.3e-56 221.1 150 72.7
FAN28G2812 Fragaria x ananassa HOM05D006610 ORTHO05D008447 1.1e-55 220.7 154 72.7
Gorai.003G006700 Gossypium raimondii HOM05D006610 ORTHO05D008447 1.1e-55 220.7 216 58.8
Aqoxy6G02108 Aquilegia oxysepala HOM05D006610 ORTHO05D008447 1.4e-55 220.3 166 67.5
Sopen02g028290 Solanum pennellii HOM05D006610 ORTHO05D008447 1.4e-55 220.3 151 72.2
GSVIVG01007223001 Vitis vinifera HOM05D006610 ORTHO05D008447 1.8e-55 219.9 156 72.4
TWI09G0665 Tripterygium wilfordii HOM05D006610 ORTHO05D008447 2.4e-55 219.5 221 57.9
Ciclev10026475m.g Citrus clementina HOM05D006610 ORTHO05D008447 3.1e-55 219.2 154 72.1
Eucgr.I02316 Eucalyptus grandis HOM05D006610 ORTHO05D008447 3.1e-55 219.2 168 66.7
AUR62034480 Chenopodium quinoa HOM05D006610 ORTHO05D008447 4.1e-55 218.8 134 79.1
CDE02G2830 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 5.4e-55 218.4 151 73.5
Haze_03713 Corylus avellana HOM05D006610 ORTHO05D008447 5.4e-55 218.4 217 59.4
Hund16514 Selenicereus undatus HOM05D006610 ORTHO05D008447 5.4e-55 218.4 153 71.9
Migut.H00253 Erythranthe guttata HOM05D006610 ORTHO05D008447 7.0e-55 218.0 151 71.5
Solyc02g083500.3 Solanum lycopersicum HOM05D006610 ORTHO05D008447 7.0e-55 218.0 153 69.3
MSTRG.15312 Avicennia marina HOM05D006610 ORTHO05D008447 9.1e-55 217.6 171 65.5
Os09g0541700 Oryza sativa ssp. japonica HOM05D006610 ORTHO05D008447 9.1e-55 217.6 153 73.2
arahy.Tifrunner.gnm1.ann1.M7YZEH Arachis hypogaea HOM05D006610 ORTHO05D008447 1.2e-54 217.2 151 70.9
FAN19G1298 Fragaria x ananassa HOM05D006610 ORTHO05D008447 1.6e-54 216.9 217 57.6
Cpa.g.sc6.302 Carica papaya HOM05D006610 ORTHO05D008447 2.0e-54 216.5 215 58.6
RcHm_v2.0_Chr2g0098651 Rosa chinensis HOM05D006610 ORTHO05D008447 2.7e-54 216.1 216 57.9
SalBow3G0370 Salvia bowleyana HOM05D006610 ORTHO05D008447 3.5e-54 215.7 151 71.5
SalBow3G0548 Salvia bowleyana HOM05D006610 ORTHO05D008447 3.5e-54 215.7 151 71.5
SGA_v2.0_scaffold49G18127 Striga asiatica HOM05D006610 ORTHO05D008447 3.5e-54 215.7 136 76.5
EL10Ac6g15167 Beta vulgaris HOM05D006610 ORTHO05D008447 4.5e-54 215.3 214 56.5
Phvul.003G266300 Phaseolus vulgaris HOM05D006610 ORTHO05D008447 7.7e-54 214.5 214 56.1
ATR0180G027 Amborella trichopoda HOM05D006610 ORTHO05D008447 1.0e-53 214.2 137 76.6
Cfa007018 Carpinus fangiana HOM05D006610 ORTHO05D008447 1.0e-53 214.2 150 72.7
DCAR_014043 Daucus carota HOM05D006610 ORTHO05D008447 1.3e-53 213.8 151 68.9
Glyma.16G123000 Glycine max HOM05D006610 ORTHO05D008447 1.7e-53 213.4 151 69.5
Lj4g0021807 Lotus japonicus HOM05D006610 ORTHO05D008447 1.7e-53 213.4 216 56.9
VMungo0251G0375 Vigna mungo HOM05D006610 ORTHO05D008447 3.8e-53 212.2 215 57.2
Medtr8g075110 Medicago truncatula HOM05D006610 ORTHO05D008447 5.0e-53 211.8 149 69.8
CANSAT01G0612 Cannabis sativa HOM05D006610 ORTHO05D008447 8.5e-53 211.1 217 56.7
Lalb_Chr16g0391471 Lupinus albus HOM05D006610 ORTHO05D008447 8.5e-53 211.1 153 68.6
FAN23G0795 Fragaria x ananassa HOM05D006610 ORTHO05D008447 1.1e-52 210.7 160 68.8
Nn6g31943 Nelumbo nucifera HOM05D006610 ORTHO05D008447 1.5e-52 210.3 130 80.8
TPR.G19505 Trifolium pratense HOM05D006610 ORTHO05D008447 1.9e-52 209.9 151 68.9
CsaV3_3G000580 Cucumis sativus L. HOM05D006610 ORTHO05D008447 2.5e-52 209.5 171 63.2
Psat4g102280 Pisum sativum HOM05D006610 ORTHO05D008447 3.2e-52 209.1 149 68.5
Sed0015497 Sechium edule HOM05D006610 ORTHO05D008447 4.2e-52 208.8 151 67.5
MELO3C013747.2 Cucumis melo HOM05D006610 ORTHO05D008447 9.4e-52 207.6 151 68.2
Gohir.D11G179450 Gossypium hirsutum HOM05D006610 ORTHO05D008447 4.7e-51 205.3 137 76.6
AagrBONN_evm.TU.Sc2ySwM_369.589 Anthoceros agrestis HOM05D006610 ORTHO05D008447 1.4e-50 203.8 159 62.9
FAN26G1933 Fragaria x ananassa HOM05D006610 ORTHO05D008447 1.8e-50 203.4 181 63.5
PSO170G5432 Papaver somniferum HOM05D006610 ORTHO05D008447 4.0e-50 202.2 138 73.2
MBI05_g19586_MAGBIO Magnolia biondii HOM05D006610 ORTHO05D008447 8.8e-50 201.1 128 76.6
unitig_736.g22562 Utricularia gibba HOM05D006610 ORTHO05D008447 2.6e-49 199.5 189 60.3
Gorai.007G191500 Gossypium raimondii HOM05D006610 ORTHO05D008447 8.3e-48 194.5 157 68.2
Pp3c9_6630 Physcomitrium patens HOM05D006610 ORTHO05D008447 8.3e-48 194.5 152 61.8
SEGI_37776 Sequoiadendron giganteum HOM05D006610 ORTHO05D008447 3.5e-46 189.1 159 59.7
Lsat_1_v5_gn_3_71540 Lactuca sativa HOM05D006610 ORTHO05D008447 7.7e-46 188.0 118 76.3
AUR62018013 Chenopodium quinoa HOM05D006610 ORTHO05D008447 7.3e-44 181.4 151 62.3
SMO361G0750 Selaginella moellendorffii HOM05D004797 ORTHO05D005752 1.6e-43 180.3 130 66.2
QL06p051388 Quercus lobata HOM05D006610 ORTHO05D008447 8.0e-43 177.9 109 80.7
ClCG10G000510 Citrullus lanatus HOM05D006610 ORTHO05D008447 5.2e-42 175.3 183 53.0
Duzib147G1005 Durio zibethinus HOM05D006610 ORTHO05D008447 1.3e-40 170.6 222 52.3
Oeu000676.1 Olea europaea HOM05D006610 ORTHO05D008447 3.2e-39 166.0 108 75.0
Hma1.2p1_3766F.1_g337520 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 3.0e-37 159.5 110 72.7
Lsat_1_v5_gn_2_20941 Lactuca sativa HOM05D006610 ORTHO05D008447 9.8e-33 144.4 94 75.5
HPP92_025898 Vanilla planifolia HOM05D006610 ORTHO05D008447 1.1e-28 131.0 96 63.5
Nn5g30811 Nelumbo nucifera HOM05D006610 ORTHO05D008447 9.5e-28 127.9 116 60.3
Dinv08559 Davidia involucrata HOM05D006610 ORTHO05D008447 1.4e-26 124.0 72 81.9
FvH4_1g11240 Fragaria vesca HOM05D006610 ORTHO05D008447 5.2e-26 122.1 159 47.8
Thecc.01G013000 Theobroma cacao HOM05D006610 ORTHO05D008447 2.0e-25 120.2 159 46.5
BcaC07g37739 Brassica carinata HOM05D006610 ORTHO05D008447 3.4e-25 119.4 68 89.7
BolC8t48119H Brassica oleracea HOM05D006610 ORTHO05D008447 3.4e-25 119.4 68 89.7
Cre15.g638400 Chlamydomonas reinhardtii HOM05D006610 ORTHO05D008447 5.8e-25 118.6 150 40.0
Sc03g0003740 Simmondsia chinensis HOM05D006610 ORTHO05D008447 6.4e-24 115.2 86 66.3
Gohir.A11G172600 Gossypium hirsutum HOM05D006610 ORTHO05D008447 1.9e-23 113.6 99 60.6
vmacro18432 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 7.8e-14 81.6 58 63.8
Solyc02g083525.1 Solanum lycopersicum HOM05D006610 ORTHO05D008447 1.1e-10 71.2 52 65.4
BcaB05g21912 Brassica carinata HOM05D006610 ORTHO05D008447 2.1e-06 57.0 64 53.1
QL06p051391 Quercus lobata HOM05D006610 ORTHO05D008447 2.7e-06 56.6 104 41.3


User provided reference genes

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