Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G44630 Arabidopsis lyrata HOM05D011091 ORTHO05D013198 7.2e-53 210.3 106 100.0
AT5G66815 Arabidopsis thaliana HOM05D011091 ORTHO05D013198 4.7e-44 181.0 106 87.7
CARHR280880 Cardamine hirsuta HOM05D011091 ORTHO05D013198 4.0e-35 151.4 109 76.1
Carub.0008s2769 Capsella rubella HOM05D011091 ORTHO05D013198 1.0e-30 136.7 106 75.5
A02p44390 Brassica napus HOM05D011091 ORTHO05D013198 1.9e-29 132.5 105 66.7
BcaC03g18399 Brassica carinata HOM05D011091 ORTHO05D013198 4.3e-29 131.3 105 64.8
C02p64780 Brassica napus HOM05D011091 ORTHO05D013198 4.3e-29 131.3 105 64.8
BolC2t12539H Brassica oleracea HOM05D011091 ORTHO05D013198 4.3e-29 131.3 105 64.8
BraA07t29437Z Brassica rapa HOM05D011091 ORTHO05D013198 9.5e-29 130.2 106 67.0
Thhalv10005488m.g Eutrema salsugineum HOM05D011091 ORTHO05D013198 1.6e-28 129.4 113 68.1
A07p17100 Brassica napus HOM05D011091 ORTHO05D013198 2.8e-28 128.6 106 66.0
BcaB07g29654 Brassica carinata HOM05D011091 ORTHO05D013198 3.1e-27 125.2 105 69.5
BraA02t09356Z Brassica rapa HOM05D011091 ORTHO05D013198 3.1e-27 125.2 105 65.7
BolC7t43026H Brassica oleracea HOM05D011091 ORTHO05D013198 2.6e-26 122.1 102 65.7
C07p24960 Brassica napus HOM05D011091 ORTHO05D013198 1.7e-25 119.4 102 64.7
Sp2g29860 Schrenkiella parvula HOM05D011091 ORTHO05D013198 1.3e-22 109.8 109 58.7
BcaB02g09987 Brassica carinata HOM05D011091 ORTHO05D013198 6.6e-22 107.5 102 59.8
BcaC06g34751 Brassica carinata HOM05D011091 ORTHO05D013198 1.2e-12 76.6 64 67.2
Gorai.003G022200 Gossypium raimondii HOM05D013202 ORTHO05D009966 1.0e-06 57.0 107 37.4
Gohir.D03G020800 Gossypium hirsutum HOM05D013202 ORTHO05D009966 1.7e-06 56.2 106 35.8
Gorai.003G022000 Gossypium raimondii HOM05D013202 ORTHO05D009966 1.7e-06 56.2 106 35.8
Gohir.A02G159800 Gossypium hirsutum HOM05D013202 ORTHO05D009966 6.6e-06 54.3 106 35.8
COL.COLO4_11388 Corchorus olitorius HOM05D008581 ORTHO05D009966 8.6e-06 53.9 112 31.2
Manes.13G126600 Manihot esculenta HOM05D008581 ORTHO05D009966 8.6e-06 53.9 121 33.1


User provided reference genes

Program Settings