Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G44220 Arabidopsis lyrata HOM05D006615 ORTHO05D007999 7.1e-114 414.1 229 100.0
AT5G67140 Arabidopsis thaliana HOM05D006615 ORTHO05D007999 5.6e-111 404.4 229 97.8
Carub.0008s2737 Capsella rubella HOM05D006615 ORTHO05D007999 1.3e-110 403.3 229 96.9
BcaB02g09933 Brassica carinata HOM05D006615 ORTHO05D007999 2.6e-108 395.6 229 95.2
CARHR280510 Cardamine hirsuta HOM05D006615 ORTHO05D007999 7.6e-108 394.0 230 95.7
BraA07t29407Z Brassica rapa HOM05D006615 ORTHO05D007999 3.8e-107 391.7 230 94.8
Thhalv10004869m.g Eutrema salsugineum HOM05D006615 ORTHO05D007999 6.4e-107 391.0 229 93.4
A07p16820 Brassica napus HOM05D006615 ORTHO05D007999 1.4e-106 389.8 230 94.3
C07p24600 Brassica napus HOM05D006615 ORTHO05D007999 2.5e-106 389.0 230 94.3
BolC7t42980H Brassica oleracea HOM05D006615 ORTHO05D007999 2.5e-106 389.0 230 94.3
Sp2g29550 Schrenkiella parvula HOM05D006615 ORTHO05D007999 3.2e-106 388.7 229 93.0
THA.LOC104821250 Tarenaya hassleriana HOM05D006615 ORTHO05D007999 6.9e-101 370.9 229 89.5
Aa31LG1G15650 Aethionema arabicum HOM05D006615 ORTHO05D007999 2.2e-99 365.9 229 88.6
Actinidia12040 Actinidia chinensis HOM05D006615 ORTHO05D007999 3.8e-83 312.0 222 71.2
CSS0020579 Camellia sinensis var. sinensis HOM05D006615 ORTHO05D007999 4.7e-81 305.1 217 75.6
vmacro05309 Vaccinium macrocarpon HOM05D006615 ORTHO05D007999 4.7e-81 305.1 218 75.7
Rhsim10G0115300 Rhododendron simsii HOM05D006615 ORTHO05D007999 5.1e-80 301.6 218 77.1
Sabra05G0110900 Salix brachista HOM05D006615 ORTHO05D007999 6.7e-80 301.2 216 76.9
Cpa.g.sc55.125 Carica papaya HOM05D006615 ORTHO05D007999 8.8e-80 300.8 228 67.1
Haze_15377 Corylus avellana HOM05D006615 ORTHO05D007999 1.5e-79 300.1 217 78.8
MD15G1285700 Malus domestica HOM05D006615 ORTHO05D007999 5.7e-79 298.1 217 76.5
Sabra07G0040600 Salix brachista HOM05D006615 ORTHO05D007999 1.3e-78 297.0 215 68.8
Ciclev10026421m.g Citrus clementina HOM05D006615 ORTHO05D007999 2.2e-78 296.2 218 74.3
QL06p040870 Quercus lobata HOM05D006615 ORTHO05D007999 2.2e-78 296.2 215 78.6
MD02G1174700 Malus domestica HOM05D006615 ORTHO05D007999 3.7e-78 295.4 217 77.0
Gohir.A12G072600 Gossypium hirsutum HOM05D006615 ORTHO05D007999 8.2e-78 294.3 217 76.5
Prupe.7G131100 Prunus persica HOM05D006615 ORTHO05D007999 8.2e-78 294.3 214 77.6
COL.COLO4_11446 Corchorus olitorius HOM05D006615 ORTHO05D007999 1.4e-77 293.5 219 74.9
RcHm_v2.0_Chr2g0105951 Rosa chinensis HOM05D006615 ORTHO05D007999 1.4e-77 293.5 217 76.0
Gohir.A02G156700 Gossypium hirsutum HOM05D006615 ORTHO05D007999 1.8e-77 293.1 221 73.3
FAN23G1998 Fragaria x ananassa HOM05D006615 ORTHO05D007999 5.3e-77 291.6 217 76.0
FAN28G0965 Fragaria x ananassa HOM05D006615 ORTHO05D007999 5.3e-77 291.6 217 76.0
Potri.005G140000 Populus trichocarpa HOM05D006615 ORTHO05D007999 5.3e-77 291.6 215 75.3
GSVIVG01022099001 Vitis vinifera HOM05D006615 ORTHO05D007999 9.1e-77 290.8 217 67.3
Nn5g30349 Nelumbo nucifera HOM05D006615 ORTHO05D007999 1.2e-76 290.4 216 75.5
AUR62001910 Chenopodium quinoa HOM05D006615 ORTHO05D007999 1.5e-76 290.0 220 65.9
FAN26G2627 Fragaria x ananassa HOM05D006615 ORTHO05D007999 1.5e-76 290.0 217 75.6
Gohir.D12G070500 Gossypium hirsutum HOM05D006615 ORTHO05D007999 1.5e-76 290.0 229 68.1
Gorai.008G077500 Gossypium raimondii HOM05D006615 ORTHO05D007999 1.5e-76 290.0 229 68.1
Gorai.003G025500 Gossypium raimondii HOM05D006615 ORTHO05D007999 2.0e-76 289.7 221 72.4
FvH4_1g16240 Fragaria vesca HOM05D006615 ORTHO05D007999 3.5e-76 288.9 217 75.1
TAR625G0931 Trochodendron aralioides HOM05D006615 ORTHO05D007999 3.5e-76 288.9 209 76.6
Atru.chr3.300 Acer truncatum HOM05D006615 ORTHO05D007999 5.9e-76 288.1 215 75.8
AUR62003898 Chenopodium quinoa HOM05D006615 ORTHO05D007999 1.3e-75 287.0 220 65.0
Manes.12G104500 Manihot esculenta HOM05D006615 ORTHO05D007999 1.3e-75 287.0 217 74.2
Gohir.D03G024000 Gossypium hirsutum HOM05D006615 ORTHO05D007999 1.7e-75 286.6 221 71.9
Ah.03g145470 Amaranthus hybridus HOM05D006615 ORTHO05D007999 2.9e-75 285.8 216 65.3
TAR381G0796 Trochodendron aralioides HOM05D006615 ORTHO05D007999 2.9e-75 285.8 218 74.8
Sc03g0001700 Simmondsia chinensis HOM05D006615 ORTHO05D007999 5.0e-75 285.0 223 64.1
Thecc.01G059100 Theobroma cacao HOM05D006615 ORTHO05D007999 5.0e-75 285.0 211 75.4
Aqoxy5G01194 Aquilegia oxysepala HOM05D006615 ORTHO05D007999 6.5e-75 284.6 221 64.7
FAN19G1431 Fragaria x ananassa HOM05D006615 ORTHO05D007999 1.4e-74 283.5 217 74.2
CSS0005072 Camellia sinensis var. sinensis HOM05D006615 ORTHO05D007999 1.9e-74 283.1 215 67.0
Oeu014828.1 Olea europaea HOM05D006615 ORTHO05D007999 3.2e-74 282.3 221 71.5
Duzib147G0216 Durio zibethinus HOM05D006615 ORTHO05D007999 9.4e-74 280.8 217 72.8
MSTRG.2870 Avicennia marina HOM05D006615 ORTHO05D007999 2.1e-73 279.6 220 68.2
CiPaw.01G016200 Carya illinoinensis HOM05D006615 ORTHO05D007999 3.6e-73 278.9 210 64.3
CsaV3_2G016460 Cucumis sativus L. HOM05D006615 ORTHO05D007999 8.0e-73 277.7 215 70.2
PSO170G0414 Papaver somniferum HOM05D006615 ORTHO05D007999 1.4e-72 276.9 224 62.5
Sed0009491 Sechium edule HOM05D006615 ORTHO05D007999 1.8e-72 276.6 215 67.9
HPP92_026439 Vanilla planifolia HOM05D006615 ORTHO05D007999 1.8e-72 276.6 224 71.0
Cc07_g06140 Coffea canephora HOM05D006615 ORTHO05D007999 2.3e-72 276.2 211 72.0
HanXRQChr09g0263661 Helianthus annuus HOM05D006615 ORTHO05D007999 2.3e-72 276.2 213 72.8
Peaxi162Scf00549g00014 Petunia axillaris HOM05D006615 ORTHO05D007999 2.3e-72 276.2 216 73.1
PSO210G0040 Papaver somniferum HOM05D006615 ORTHO05D007999 3.0e-72 275.8 223 62.8
Nitab4.5_0002765g0020 Nicotiana tabacum HOM05D006615 ORTHO05D007999 5.2e-72 275.0 216 74.1
Nitab4.5_0002694g0020 Nicotiana tabacum HOM05D006615 ORTHO05D007999 6.7e-72 274.6 216 73.6
ClCG02G012310 Citrullus lanatus HOM05D006615 ORTHO05D007999 8.8e-72 274.2 215 70.7
CDE02G1946 Ceratophyllum demersum HOM05D006615 ORTHO05D007999 1.1e-71 273.9 226 69.5
Migut.H00418 Erythranthe guttata HOM05D006615 ORTHO05D007999 1.1e-71 273.9 215 73.0
Sopen02g037800 Solanum pennellii HOM05D006615 ORTHO05D007999 1.1e-71 273.9 216 72.2
Cfa004036 Carpinus fangiana HOM05D006615 ORTHO05D007999 1.5e-71 273.5 197 78.7
Solyc02g093220.3 Solanum lycopersicum HOM05D006615 ORTHO05D007999 2.0e-71 273.1 216 71.8
PGSC0003DMG400004030 Solanum tuberosum HOM05D006615 ORTHO05D007999 2.0e-71 273.1 216 71.8
CAN.G370.40 Capsicum annuum HOM05D006615 ORTHO05D007999 3.3e-71 272.3 216 72.2
Hma1.2p1_0670F.1_g200450 Hydrangea macrophylla HOM05D006615 ORTHO05D007999 7.4e-71 271.2 219 63.9
Oeu049899.1 Olea europaea HOM05D006615 ORTHO05D007999 9.7e-71 270.8 217 70.0
CDE04G2757 Ceratophyllum demersum HOM05D006615 ORTHO05D007999 6.3e-70 268.1 220 67.7
Dinv26838 Davidia involucrata HOM05D000573 ORTHO05D000425 6.3e-70 268.1 167 76.6
Hund16348 Selenicereus undatus HOM05D006615 ORTHO05D007999 8.2e-70 267.7 270 52.6
TPR.G26907 Trifolium pratense HOM05D006615 ORTHO05D007999 8.2e-70 267.7 210 65.7
MELO3C020856.2 Cucumis melo HOM05D006615 ORTHO05D007999 1.4e-69 266.9 224 67.0
Lsat_1_v5_gn_4_164980 Lactuca sativa HOM05D006615 ORTHO05D007999 1.4e-69 266.9 221 69.7
Glyma.11G054300 Glycine max HOM05D006615 ORTHO05D007999 2.4e-69 266.2 210 73.3
Medtr5g016890 Medicago truncatula HOM05D006615 ORTHO05D007999 3.1e-69 265.8 210 72.4
Phvul.002G017400 Phaseolus vulgaris HOM05D006615 ORTHO05D007999 9.1e-69 264.2 210 73.3
Psat2g167840 Pisum sativum HOM05D006615 ORTHO05D007999 1.2e-68 263.8 210 64.8
Lj4C151G8 Lonicera japonica HOM05D006615 ORTHO05D007999 3.5e-68 262.3 209 68.4
Lj2g0018871 Lotus japonicus HOM05D006615 ORTHO05D007999 5.9e-68 261.5 204 74.0
ATR0800G077 Amborella trichopoda HOM05D006615 ORTHO05D007999 7.7e-68 261.2 220 69.1
DCAR_010880 Daucus carota HOM05D006615 ORTHO05D007999 1.0e-67 260.8 212 67.9
Glyma.01G187800 Glycine max HOM05D006615 ORTHO05D007999 1.0e-67 260.8 214 70.6
TWI09G1033 Tripterygium wilfordii HOM05D006615 ORTHO05D007999 3.8e-67 258.8 217 59.4
Lalb_Chr16g0378591 Lupinus albus HOM05D006615 ORTHO05D007999 6.5e-67 258.1 207 72.0
arahy.Tifrunner.gnm1.ann1.XJ9ES7 Arachis hypogaea HOM05D006615 ORTHO05D007999 5.5e-66 255.0 207 72.0
VMungo1215G1750 Vigna mungo HOM05D006615 ORTHO05D007999 7.2e-66 254.6 210 72.9
ECA232G2507 Erigeron canadensis HOM05D002761 ORTHO05D003351 9.4e-66 254.2 167 71.9
arahy.Tifrunner.gnm1.ann1.8K3JW9 Arachis hypogaea HOM05D006615 ORTHO05D007999 1.6e-65 253.4 207 71.5
Eucgr.H01687 Eucalyptus grandis HOM05D006615 ORTHO05D007999 2.7e-65 252.7 209 57.4
Atru.chr3.288 Acer truncatum HOM05D006615 ORTHO05D007999 8.0e-65 251.1 188 76.6
Oeu017456.1 Olea europaea HOM05D006615 ORTHO05D007999 8.0e-65 251.1 221 65.6
MELO3C020857.2 Cucumis melo HOM05D006615 ORTHO05D007999 1.8e-64 250.0 215 65.6
CsaV3_2G016470 Cucumis sativus L. HOM05D006615 ORTHO05D007999 5.2e-64 248.4 215 65.1
Lalb_Chr05g0213321 Lupinus albus HOM05D006615 ORTHO05D007999 4.4e-63 245.4 207 60.9
Actinidia36482 Actinidia chinensis HOM05D006615 ORTHO05D007999 5.3e-61 238.4 201 63.7
CANSAT01G0297 Cannabis sativa HOM05D006615 ORTHO05D007999 1.1e-58 230.7 222 56.3
Os06g0166000 Oryza sativa ssp. japonica HOM05D006615 ORTHO05D007999 1.1e-58 230.7 217 53.0
SEGI_10636 Sequoiadendron giganteum HOM05D006615 ORTHO05D007999 4.2e-58 228.8 205 64.4
Zm00001eb375600 Zea mays HOM05D006615 ORTHO05D007999 4.4e-55 218.8 214 52.8
SGA_v2.0_scaffold15G07326 Striga asiatica HOM05D006615 ORTHO05D007999 1.2e-52 210.7 216 64.4
Pp3c7_15700 Physcomitrium patens HOM05D006615 ORTHO05D007999 6.8e-48 194.9 204 57.4
unitig_748.g8604 Utricularia gibba HOM05D002191 ORTHO05D007999 7.0e-45 184.9 167 55.7
Mapoly0005s0095 Marchantia polymorpha HOM05D006615 ORTHO05D007999 1.2e-41 174.1 222 39.6
AagrBONN_evm.TU.Sc2ySwM_344.5234 Anthoceros agrestis HOM05D006615 ORTHO05D007999 4.4e-39 165.6 206 51.0
Aqoxy6G01271 Aquilegia oxysepala HOM05D006615 ORTHO05D007999 1.3e-38 164.1 156 66.0
TWI73G1298 Tripterygium wilfordii HOM05D006615 ORTHO05D007999 1.4e-37 160.6 147 54.4
Potri.007G045601 Populus trichocarpa HOM05D006615 ORTHO05D007999 2.5e-34 149.8 97 74.2
SMO164G0246 Selaginella moellendorffii HOM05D006615 ORTHO05D007999 2.3e-32 143.3 209 48.3
MSTRG.3434 Avicennia marina HOM05D006615 ORTHO05D007999 7.3e-18 95.1 93 73.1
ClCG02G012330 Citrullus lanatus HOM05D006615 ORTHO05D007999 2.0e-15 87.0 81 53.1
EL10Ac6g15726 Beta vulgaris HOM05D006615 ORTHO05D007999 3.0e-11 73.2 160 33.1
Phvul.008G146300 Phaseolus vulgaris HOM05D006615 ORTHO05D007999 1.5e-10 70.9 46 69.6
RcHm_v2.0_Chr3g0487451 Rosa chinensis HOM05D032618 ORTHO05D007999 6.4e-06 55.5 54 51.9


User provided reference genes

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