Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G43080 Arabidopsis lyrata HOM05D007889 ORTHO05D009987 9.5e-44 179.9 96 100.0
AT5G65495 Arabidopsis thaliana HOM05D007889 ORTHO05D009987 2.8e-40 168.3 96 95.8
Thhalv10005325m.g Eutrema salsugineum HOM05D007889 ORTHO05D009987 1.5e-36 156.0 96 88.5
Carub.0008s2635 Capsella rubella HOM05D007889 ORTHO05D009987 4.3e-36 154.5 94 91.5
BcaC01g02781 Brassica carinata HOM05D007889 ORTHO05D009987 2.8e-35 151.8 97 87.6
C03p60490 Brassica napus HOM05D007889 ORTHO05D009987 2.8e-35 151.8 97 87.6
BolC3t18310H Brassica oleracea HOM05D007889 ORTHO05D009987 1.8e-34 149.1 97 86.6
Sp2g28580 Schrenkiella parvula HOM05D007889 ORTHO05D009987 2.3e-34 148.7 96 87.5
BraA06t26160Z Brassica rapa HOM05D007889 ORTHO05D009987 8.3e-32 140.2 91 85.7
Aa31LG1G16500 Aethionema arabicum HOM05D007889 ORTHO05D009987 5.6e-28 127.5 96 77.1
THA.LOC109116914 Tarenaya hassleriana HOM05D007889 ORTHO05D009987 1.4e-26 122.9 96 71.9
THA.LOC109116122 Tarenaya hassleriana HOM05D007889 ORTHO05D009987 3.2e-23 111.7 96 66.7
Manes.13G100900 Manihot esculenta HOM05D007889 ORTHO05D009987 7.1e-23 110.5 97 66.0
Manes.12G125800 Manihot esculenta HOM05D007889 ORTHO05D009987 2.1e-22 109.0 96 62.5
Cpa.g.sc55.18 Carica papaya HOM05D007889 ORTHO05D009987 1.3e-21 106.3 92 66.3
CANSAT01G1217 Cannabis sativa HOM05D007889 ORTHO05D009987 1.7e-21 105.9 93 64.5
FAN23G2864 Fragaria x ananassa HOM05D007889 ORTHO05D009987 6.6e-21 104.0 90 66.7
FAN26G2710 Fragaria x ananassa HOM05D007889 ORTHO05D009987 6.6e-21 104.0 90 66.7
FAN28G0932 Fragaria x ananassa HOM05D007889 ORTHO05D009987 1.9e-20 102.4 90 65.6
RcHm_v2.0_Chr2g0111151 Rosa chinensis HOM05D007889 ORTHO05D009987 1.9e-20 102.4 92 65.2
Thecc.01G089900 Theobroma cacao HOM05D007889 ORTHO05D009987 1.9e-20 102.4 96 60.4
CiPaw.07G047100 Carya illinoinensis HOM05D007889 ORTHO05D009987 2.5e-20 102.1 99 63.6
Cc07_g14040 Coffea canephora HOM05D007889 ORTHO05D009987 2.5e-20 102.1 73 72.6
FvH4_1g19600 Fragaria vesca HOM05D007889 ORTHO05D009987 2.5e-20 102.1 90 64.4
FAN19G1328 Fragaria x ananassa HOM05D007889 ORTHO05D009987 2.5e-20 102.1 90 64.4
TWI74G1088 Tripterygium wilfordii HOM05D007889 ORTHO05D009987 2.5e-20 102.1 91 63.7
Haze_03881 Corylus avellana HOM05D007889 ORTHO05D009987 1.2e-19 99.8 97 60.8
Dinv36939 Davidia involucrata HOM05D007889 ORTHO05D009987 1.2e-19 99.8 91 60.4
PGR102G1376 Punica granatum HOM05D007889 ORTHO05D009987 2.1e-19 99.0 98 61.2
COL.COLO4_27358 Corchorus olitorius HOM05D007889 ORTHO05D009987 2.8e-19 98.6 96 59.4
TWI77G0910 Tripterygium wilfordii HOM05D007889 ORTHO05D009987 3.6e-19 98.2 91 61.5
Atru.chr3.1237 Acer truncatum HOM05D007889 ORTHO05D009987 6.2e-19 97.4 95 61.1
CSS0006316 Camellia sinensis var. sinensis HOM05D007889 ORTHO05D009987 8.1e-19 97.1 92 60.9
CSS0045661 Camellia sinensis var. sinensis HOM05D007889 ORTHO05D009987 8.1e-19 97.1 92 60.9
Gohir.A02G144900 Gossypium hirsutum HOM05D007889 ORTHO05D009987 8.1e-19 97.1 96 57.3
Gohir.D03G035700 Gossypium hirsutum HOM05D007889 ORTHO05D009987 8.1e-19 97.1 96 57.3
Gorai.003G037300 Gossypium raimondii HOM05D007889 ORTHO05D009987 1.4e-18 96.3 96 57.3
Duzib147G1657 Durio zibethinus HOM05D007889 ORTHO05D009987 1.8e-18 95.9 97 59.8
QL06p035849 Quercus lobata HOM05D007889 ORTHO05D009987 2.3e-18 95.5 95 61.1
Ciclev10026840m.g Citrus clementina HOM05D007889 ORTHO05D009987 5.2e-18 94.4 97 56.7
Migut.K00803 Erythranthe guttata HOM05D007889 ORTHO05D009987 2.6e-17 92.0 87 58.6
MSTRG.15685 Avicennia marina HOM05D007889 ORTHO05D009987 3.4e-17 91.7 90 55.6
SalBow3G4637 Salvia bowleyana HOM05D007889 ORTHO05D009987 7.6e-17 90.5 90 55.6
Ca_22615_v3 Cicer arietinum L. HOM05D007889 ORTHO05D009987 1.7e-16 89.4 90 56.7
Actinidia25305 Actinidia chinensis HOM05D007889 ORTHO05D009987 1.1e-15 86.7 94 58.5
Lj4g0025467 Lotus japonicus HOM05D007889 ORTHO05D009987 1.1e-15 86.7 91 54.9
SGA_v2.0_scaffold195G40857 Striga asiatica HOM05D007889 ORTHO05D009987 1.4e-15 86.3 90 53.3
Oeu012264.1 Olea europaea HOM05D007889 ORTHO05D009987 1.9e-15 85.9 100 54.0
Nitab4.5_0006217g0010 Nicotiana tabacum HOM05D007889 ORTHO05D009987 2.4e-15 85.5 87 58.6
Nitab4.5_0006221g0010 Nicotiana tabacum HOM05D007889 ORTHO05D009987 2.4e-15 85.5 100 51.0
ECA232G4810 Erigeron canadensis HOM05D007889 ORTHO05D009987 4.1e-15 84.7 92 54.3
Prupe.6G202300 Prunus persica HOM05D007889 ORTHO05D009987 5.4e-15 84.3 93 57.0
Solyc11g010680.4 Solanum lycopersicum HOM05D007889 ORTHO05D009987 5.4e-15 84.3 90 58.9
Sopen11g005480 Solanum pennellii HOM05D007889 ORTHO05D009987 5.4e-15 84.3 90 58.9
unitig_32.g11801 Utricularia gibba HOM05D007889 ORTHO05D009987 7.1e-15 84.0 71 62.0
PGSC0003DMG402016199 Solanum tuberosum HOM05D007889 ORTHO05D009987 1.2e-14 83.2 90 58.9
EL10Ac6g15200 Beta vulgaris HOM05D007889 ORTHO05D009987 1.6e-14 82.8 67 67.2
Eucgr.L00470 Eucalyptus grandis HOM05D007889 ORTHO05D009987 1.6e-14 82.8 66 66.7
Ah.02g123520 Amaranthus hybridus HOM05D007889 ORTHO05D009987 2.1e-14 82.4 99 51.5
Cfa006876 Carpinus fangiana HOM05D007889 ORTHO05D009987 4.6e-14 81.3 97 51.5
Rhsim10G0173200 Rhododendron simsii HOM05D007889 ORTHO05D009987 4.6e-14 81.3 63 73.0
Lsat_1_v5_gn_4_143420 Lactuca sativa HOM05D007889 ORTHO05D009987 1.0e-13 80.1 99 50.5
Medtr8g068560 Medicago truncatula HOM05D007889 ORTHO05D009987 1.7e-13 79.3 90 53.3
MELO3C032898.2 Cucumis melo HOM05D007889 ORTHO05D009987 3.9e-13 78.2 97 49.5
Psat4g119800 Pisum sativum HOM05D007889 ORTHO05D009987 8.6e-13 77.0 68 61.8
AUR62003668 Chenopodium quinoa HOM05D007889 ORTHO05D009987 1.5e-12 76.3 104 47.1
PSO541G6452 Papaver somniferum HOM05D007889 ORTHO05D009987 1.5e-12 76.3 92 50.0
Peaxi162Scf00474g00715 Petunia axillaris HOM05D007889 ORTHO05D009987 4.3e-12 74.7 83 56.6
Aqoxy5G01377 Aquilegia oxysepala HOM05D007889 ORTHO05D009987 5.6e-12 74.3 87 55.2
Nitab4.5_0000902g0320 Nicotiana tabacum HOM05D007889 ORTHO05D009987 7.3e-12 73.9 95 45.3
Nitab4.5_0007872g0020 Nicotiana tabacum HOM05D007889 ORTHO05D009987 1.6e-11 72.8 95 43.2
Lalb_Chr05g0228531 Lupinus albus HOM05D007889 ORTHO05D009987 3.6e-11 71.6 84 57.1
Eucgr.H04722 Eucalyptus grandis HOM05D007889 ORTHO05D009987 8.9e-10 67.0 97 47.4
CsaV3_6G044960 Cucumis sativus L. HOM05D007889 ORTHO05D009987 4.4e-09 64.7 86 46.5
vmacro08762 Vaccinium macrocarpon HOM05D007889 ORTHO05D009987 3.2e-07 58.5 50 64.0


User provided reference genes

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