Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G42380 Arabidopsis lyrata HOM05D009783 ORTHO05D011958 1.6e-42 176.0 111 100.0
AT5G64890 Arabidopsis thaliana HOM05D009783 ORTHO05D011958 3.0e-25 118.6 109 60.6
AL8G35260 Arabidopsis lyrata HOM05D009783 ORTHO05D011958 7.6e-21 104.0 99 60.6
AL139U10010 Arabidopsis lyrata HOM05D009783 ORTHO05D011958 1.0e-20 103.6 99 60.6
Carub.0008s2572 Capsella rubella HOM05D009783 ORTHO05D011958 5.5e-19 97.8 113 50.4
CARHR278900 Cardamine hirsuta HOM05D009783 ORTHO05D011958 2.4e-14 82.4 100 50.0
BcaC01g02722 Brassica carinata HOM05D009783 ORTHO05D011958 1.9e-11 72.8 104 45.2
C03p61280 Brassica napus HOM05D009783 ORTHO05D011958 1.9e-11 72.8 104 45.2
BolC3t18389H Brassica oleracea HOM05D009783 ORTHO05D011958 1.9e-11 72.8 104 45.2
BcaB02g09839 Brassica carinata HOM05D009783 ORTHO05D011958 1.2e-10 70.1 103 44.7
BcaB07g29764 Brassica carinata HOM05D009783 ORTHO05D011958 1.5e-08 63.2 97 54.6
AT5G64900 Arabidopsis thaliana HOM05D009783 ORTHO05D011958 5.7e-08 61.2 97 46.4
A02p43560 Brassica napus HOM05D009783 ORTHO05D011958 7.4e-08 60.8 107 45.8
A06p31680 Brassica napus HOM05D009783 ORTHO05D011958 1.3e-07 60.1 106 48.1
BraA02t09283Z Brassica rapa HOM05D009783 ORTHO05D011958 1.7e-07 59.7 107 45.8
Sp2g27970 Schrenkiella parvula HOM05D009783 ORTHO05D011958 2.2e-07 59.3 105 55.2
Thhalv10005173m.g Eutrema salsugineum HOM05D009783 ORTHO05D011958 2.8e-07 58.9 102 41.2
BcaC03g18285 Brassica carinata HOM05D009783 ORTHO05D011958 6.3e-07 57.8 98 59.2
Carub.0008s2573 Capsella rubella HOM05D009783 ORTHO05D011958 1.4e-06 56.6 49 63.3
BcaC03g18287 Brassica carinata HOM05D009783 ORTHO05D011958 5.3e-06 54.7 108 47.2
BcaC03g18290 Brassica carinata HOM05D009783 ORTHO05D011958 5.3e-06 54.7 108 47.2
C02p63650 Brassica napus HOM05D009783 ORTHO05D011958 5.3e-06 54.7 108 47.2
BolC2t12431H Brassica oleracea HOM05D009783 ORTHO05D011958 5.3e-06 54.7 108 47.2
CARHR278930 Cardamine hirsuta HOM05D009783 ORTHO05D011958 5.3e-06 54.7 103 44.7


User provided reference genes

Program Settings