Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G40940 Arabidopsis lyrata HOM05D009813 ORTHO05D011936 3.1e-107 392.1 249 100.0
AL8G40880 Arabidopsis lyrata HOM05D009813 ORTHO05D011936 9.2e-107 390.6 249 99.6
AT5G63720 Arabidopsis thaliana HOM05D009813 ORTHO05D011936 3.6e-79 298.9 250 71.6
Carub.0008s2449 Capsella rubella HOM05D009813 ORTHO05D011936 5.5e-51 205.3 248 60.5
Thhalv10029311m.g Eutrema salsugineum HOM05D009813 ORTHO05D011936 1.6e-39 167.2 244 52.5
CARHR098770 Cardamine hirsuta HOM05D009813 ORTHO05D011936 3.0e-33 146.4 239 49.0
Sp2g26820 Schrenkiella parvula HOM05D009813 ORTHO05D011936 2.5e-32 143.3 245 49.8
CARHR277640 Cardamine hirsuta HOM05D009813 ORTHO05D011936 2.2e-31 140.2 249 50.2
BcaC04g23353 Brassica carinata HOM05D009813 ORTHO05D011936 2.4e-30 136.7 245 46.1
BcaNung04641 Brassica carinata HOM05D009813 ORTHO05D011936 2.4e-30 136.7 245 50.6
A09p08400 Brassica napus HOM05D009813 ORTHO05D011936 3.0e-25 119.8 242 43.0
BraA09t36490Z Brassica rapa HOM05D009813 ORTHO05D011936 3.0e-25 119.8 242 43.0
Thhalv10019657m.g Eutrema salsugineum HOM05D009813 ORTHO05D011936 2.0e-24 117.1 243 41.2
C09p09510 Brassica napus HOM05D009813 ORTHO05D011936 3.3e-24 116.3 245 44.1
Aa31LG1G18120 Aethionema arabicum HOM05D009813 ORTHO05D011936 4.4e-24 115.9 222 45.0
BolC9t53863H Brassica oleracea HOM05D009813 ORTHO05D011936 2.8e-23 113.2 245 48.6
A06p30320 Brassica napus HOM05D009813 ORTHO05D011936 1.0e-20 104.8 158 54.4
BraA06t25981Z Brassica rapa HOM05D009813 ORTHO05D011936 6.5e-20 102.1 162 51.2
BolC4t22698H Brassica oleracea HOM05D009813 ORTHO05D011936 1.1e-19 101.3 195 50.8
BcaC01g02626 Brassica carinata HOM05D009813 ORTHO05D011936 2.1e-18 97.1 250 46.4
C03p62710 Brassica napus HOM05D009813 ORTHO05D011936 4.7e-18 95.9 250 46.0
BolC3t18527H Brassica oleracea HOM05D009813 ORTHO05D011936 6.1e-18 95.5 246 46.7
BolC4t22734H Brassica oleracea HOM05D009813 ORTHO05D011936 6.1e-18 95.5 166 53.6
BcaB02g09735 Brassica carinata HOM05D009813 ORTHO05D011936 3.0e-17 93.2 163 47.2
THA.LOC104800245 Tarenaya hassleriana HOM05D009813 ORTHO05D011936 3.1e-14 83.2 236 34.3
Cpa.g.sc37.40 Carica papaya HOM05D001512 ORTHO05D001574 5.3e-14 82.4 219 37.9
FAN19G1264 Fragaria x ananassa HOM05D012473 ORTHO05D010844 3.8e-12 76.3 177 40.7
Thecc.01G142200 Theobroma cacao HOM05D012218 ORTHO05D010844 1.5e-11 74.3 160 34.4
EL10Ac4g09661 Beta vulgaris HOM05D030946 ORTHO05D010844 5.5e-11 72.4 201 36.8
FAN28G1165 Fragaria x ananassa HOM05D012473 ORTHO05D010844 2.1e-10 70.5 192 38.5
FvH4_1g25520 Fragaria vesca HOM05D012473 ORTHO05D010844 6.1e-10 68.9 179 39.7
CiPaw.03G115200 Carya illinoinensis HOM05D012218 ORTHO05D010844 1.4e-09 67.8 205 35.6
Gohir.A05G382500 Gossypium hirsutum HOM05D012218 ORTHO05D010844 3.0e-09 66.6 181 30.9
Medtr6g078430 Medicago truncatula HOM05D012459 ORTHO05D010844 6.7e-09 65.5 137 40.9
Psat0s4832g0040 Pisum sativum HOM05D012459 ORTHO05D010844 8.8e-09 65.1 190 35.3
TPR.G28364 Trifolium pratense HOM05D012459 ORTHO05D010844 1.2e-08 64.7 153 39.2
TWI31G0860 Tripterygium wilfordii HOM05D012218 ORTHO05D010844 1.2e-08 64.7 143 37.8
Duzib187G0544 Durio zibethinus HOM05D012218 ORTHO05D010844 1.5e-08 64.3 163 36.8
Gorai.012G037100 Gossypium raimondii HOM05D012218 ORTHO05D010844 2.6e-08 63.5 233 33.5
Gohir.D04G032700 Gossypium hirsutum HOM05D012218 ORTHO05D010844 4.4e-08 62.8 181 31.5
Sabra07G0081700 Salix brachista HOM05D012218 ORTHO05D017165 7.5e-08 62.0 166 36.7
arahy.Tifrunner.gnm1.ann1.9KKX2T Arachis hypogaea HOM05D012459 ORTHO05D010844 1.7e-07 60.8 159 41.5
Potri.007G098300 Populus trichocarpa HOM05D012218 ORTHO05D017165 1.7e-07 60.8 180 35.0
arahy.Tifrunner.gnm1.ann1.UJV3YP Arachis hypogaea HOM05D012459 ORTHO05D010844 4.8e-07 59.3 159 40.3
Sc09g0002200 Simmondsia chinensis HOM05D030946 ORTHO05D010844 4.8e-07 59.3 148 35.8
Lj2g0023112 Lotus japonicus HOM05D012459 ORTHO05D010844 1.1e-06 58.2 190 37.4
MD15G1138700 Malus domestica HOM05D012473 ORTHO05D010844 1.1e-06 58.2 111 42.3
Haze_16528 Corylus avellana HOM05D012473 ORTHO05D010844 2.4e-06 57.0 178 38.2
QL10p005044 Quercus lobata HOM05D012473 ORTHO05D010844 2.4e-06 57.0 189 30.7


User provided reference genes

Program Settings