Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G38980 Arabidopsis lyrata HOM05D003765 ORTHO05D004561 0.0e+00 1297.3 709 100.0
Carub.0008s2285 Capsella rubella HOM05D003765 ORTHO05D004561 0.0e+00 1078.5 725 84.0
CARHR275960 Cardamine hirsuta HOM05D003765 ORTHO05D004561 3.6e-297 1024.6 729 82.4
Thhalv10003732m.g Eutrema salsugineum HOM05D003765 ORTHO05D004561 1.4e-293 1012.7 731 82.5
AT5G62170 Arabidopsis thaliana HOM05D003765 ORTHO05D004561 1.8e-288 995.7 595 89.4
Sp2g25350 Schrenkiella parvula HOM05D003765 ORTHO05D004561 1.3e-283 979.5 734 77.5
A06p28880 Brassica napus HOM05D003765 ORTHO05D004561 1.1e-274 949.9 730 76.8
BraA06t25836Z Brassica rapa HOM05D003765 ORTHO05D004561 2.5e-274 948.7 733 76.5
BolC3t18736H Brassica oleracea HOM05D003765 ORTHO05D004561 4.2e-274 948.0 727 77.3
C03p64740 Brassica napus HOM05D003765 ORTHO05D004561 4.7e-233 811.6 600 76.3
Aa31LG11G1410 Aethionema arabicum HOM05D003765 ORTHO05D004561 2.5e-194 682.9 737 65.0
BcaB02g09632 Brassica carinata HOM05D003765 ORTHO05D004561 2.8e-177 626.3 678 61.9
THA.LOC104824843 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 5.5e-157 558.9 668 53.6
THA.LOC104818268 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 3.3e-149 533.1 671 52.2
BolC9t53753H Brassica oleracea HOM05D003765 ORTHO05D004561 4.6e-103 379.8 671 45.5
BcaNung01408 Brassica carinata HOM05D003765 ORTHO05D004561 5.6e-101 372.9 716 44.4
C09p08430 Brassica napus HOM05D003765 ORTHO05D004561 5.6e-101 372.9 686 44.5
BraA09t36408Z Brassica rapa HOM05D003765 ORTHO05D004561 9.9e-98 362.1 674 45.1
BcaC04g23427 Brassica carinata HOM05D003765 ORTHO05D004561 4.6e-95 353.2 625 45.6
A09p07540 Brassica napus HOM05D003765 ORTHO05D004561 4.6e-95 353.2 689 44.3
BcaNung01409 Brassica carinata HOM05D003765 ORTHO05D004561 2.4e-91 340.9 670 43.4
Thecc.03G167000 Theobroma cacao HOM05D003765 ORTHO05D004561 1.9e-88 331.3 774 38.8
Cpa.g.sc4.199 Carica papaya HOM05D003765 ORTHO05D004561 2.8e-84 317.4 745 39.3
Manes.06G141500 Manihot esculenta HOM05D003765 ORTHO05D004561 2.8e-84 317.4 764 38.9
FAN06G1616 Fragaria x ananassa HOM05D003765 ORTHO05D004561 2.4e-83 314.3 685 39.0
FAN06G4109 Fragaria x ananassa HOM05D003765 ORTHO05D004561 3.1e-83 313.9 685 39.0
FvH4_7g28730 Fragaria vesca HOM05D003765 ORTHO05D004561 1.2e-82 312.0 683 39.1
Gorai.008G281700 Gossypium raimondii HOM05D003765 ORTHO05D004561 1.5e-82 311.6 727 37.4
FAN10G2022 Fragaria x ananassa HOM05D003765 ORTHO05D004561 3.4e-82 310.5 674 39.0
Duzib084G1451 Durio zibethinus HOM05D003765 ORTHO05D004561 1.1e-80 305.4 742 36.9
FAN03G1770 Fragaria x ananassa HOM05D003765 ORTHO05D004561 1.1e-80 305.4 682 38.3
FAN03G1055 Fragaria x ananassa HOM05D003765 ORTHO05D004561 1.9e-80 304.7 682 38.1
Sabra15G0147100 Salix brachista HOM05D003765 ORTHO05D004561 1.0e-78 298.9 735 37.8
Ciclev10004387m.g Citrus clementina HOM05D003765 ORTHO05D004561 2.3e-78 297.7 788 38.3
RcHm_v2.0_Chr1g0376241 Rosa chinensis HOM05D003765 ORTHO05D004561 2.3e-78 297.7 683 38.1
Gohir.A12G262100 Gossypium hirsutum HOM05D003765 ORTHO05D004561 1.9e-77 294.7 725 36.8
Potri.015G135200 Populus trichocarpa HOM05D003765 ORTHO05D004561 4.3e-77 293.5 735 37.1
Lj1A988T34 Lonicera japonica HOM05D003765 ORTHO05D004561 1.4e-75 288.5 719 37.0
Actinidia13542 Actinidia chinensis HOM05D003765 ORTHO05D004561 5.3e-75 286.6 683 37.5
FAN01G1737 Fragaria x ananassa HOM05D003765 ORTHO05D004561 1.5e-74 285.0 707 36.8
Atru.chr1.559 Acer truncatum HOM05D003765 ORTHO05D004561 2.6e-74 284.3 800 34.4
Gohir.D12G262800 Gossypium hirsutum HOM05D003765 ORTHO05D004561 1.3e-73 282.0 594 40.2
Potri.012G132900 Populus trichocarpa HOM05D003765 ORTHO05D004561 3.8e-73 280.4 734 37.6
Peaxi162Scf00192g00516 Petunia axillaris HOM05D003765 ORTHO05D004561 2.5e-69 267.7 733 34.9
Prupe.2G287400 Prunus persica HOM05D003765 ORTHO05D004561 2.5e-69 267.7 709 36.1
Manes.14G030900 Manihot esculenta HOM05D003765 ORTHO05D004561 5.7e-69 266.5 769 34.3
Nitab4.5_0000599g0030 Nicotiana tabacum HOM05D003765 ORTHO05D004561 7.4e-69 266.2 707 35.2
Duzib205G1056 Durio zibethinus HOM05D003765 ORTHO05D004561 3.1e-67 260.8 621 38.2
MD00G1004300 Malus domestica HOM05D003765 ORTHO05D004561 6.9e-67 259.6 704 33.9
Nitab4.5_0004911g0030 Nicotiana tabacum HOM05D003765 ORTHO05D004561 7.7e-66 256.1 722 34.5
MD01G1193200 Malus domestica HOM05D003765 ORTHO05D004561 1.3e-65 255.4 711 34.7
Haze_13790 Corylus avellana HOM05D003765 ORTHO05D004561 2.2e-65 254.6 662 36.9
Aa31LG6G8690 Aethionema arabicum HOM05D003765 ORTHO05D004561 3.8e-65 253.8 334 65.0
Eucgr.A02847 Eucalyptus grandis HOM05D003765 ORTHO05D004561 5.0e-65 253.4 715 35.7
Cc02_g03580 Coffea canephora HOM05D003765 ORTHO05D004561 2.1e-63 248.1 735 35.4
Gorai.006G196800 Gossypium raimondii HOM05D003765 ORTHO05D004561 1.8e-62 245.0 721 33.8
CANSAT21G2021 Cannabis sativa HOM05D003765 ORTHO05D004561 1.1e-61 242.3 791 32.4
CiPaw.03G100300 Carya illinoinensis HOM05D003765 ORTHO05D004561 1.5e-61 241.9 728 33.5
Sabra12G0100000 Salix brachista HOM05D003765 ORTHO05D004561 2.0e-61 241.5 732 34.6
Gohir.A09G179400 Gossypium hirsutum HOM05D003765 ORTHO05D004561 2.6e-61 241.1 720 33.8
TAR629G2057 Trochodendron aralioides HOM05D003765 ORTHO05D004561 9.7e-61 239.2 661 34.2
Gohir.D09G174700 Gossypium hirsutum HOM05D003765 ORTHO05D004561 1.7e-60 238.4 707 33.0
Sopen03g002830 Solanum pennellii HOM05D003765 ORTHO05D004561 2.6e-58 231.1 725 34.1
Peaxi162Scf00557g00216 Petunia axillaris HOM05D003765 ORTHO05D004561 1.3e-57 228.8 709 35.7
PGSC0003DMG400024251 Solanum tuberosum HOM05D003765 ORTHO05D004561 1.7e-57 228.4 735 34.1
Nn1g01288 Nelumbo nucifera HOM05D003765 ORTHO05D004561 2.2e-57 228.0 768 33.3
PSO478G3102 Papaver somniferum HOM05D003765 ORTHO05D004561 5.0e-57 226.9 709 33.0
Solyc03g006840.4 Solanum lycopersicum HOM05D003765 ORTHO05D004561 4.2e-56 223.8 725 34.6
Oeu030141.1 Olea europaea HOM05D003765 ORTHO05D004561 5.5e-56 223.4 721 37.4
SalBow2G1841 Salvia bowleyana HOM05D003765 ORTHO05D004561 9.4e-56 222.6 646 33.6
Lsat_1_v5_gn_9_53700 Lactuca sativa HOM05D003765 ORTHO05D004561 1.2e-55 222.2 683 33.7
PGR042G0955 Punica granatum HOM05D003765 ORTHO05D004561 2.1e-55 221.5 743 31.8
EL10Ac3g05741 Beta vulgaris HOM05D003765 ORTHO05D004561 4.7e-55 220.3 672 32.1
Phvul.004G123200 Phaseolus vulgaris HOM05D003765 ORTHO05D004561 1.8e-54 218.4 714 34.2
Nitab4.5_0000205g0170 Nicotiana tabacum HOM05D003765 ORTHO05D004561 3.0e-54 217.6 719 35.2
PSO782G0143 Papaver somniferum HOM05D003765 ORTHO05D004561 1.5e-53 215.3 683 33.2
MSTRG.8430 Avicennia marina HOM05D003765 ORTHO05D004561 2.0e-53 214.9 682 33.3
GSVIVG01018447001 Vitis vinifera HOM05D003765 ORTHO05D004561 7.5e-53 213.0 713 36.2
vmacro06738 Vaccinium macrocarpon HOM05D003765 ORTHO05D004561 1.7e-52 211.8 707 33.5
Aqoxy7G00497 Aquilegia oxysepala HOM05D003765 ORTHO05D004561 2.2e-52 211.5 715 31.6
Glyma.09G148700 Glycine max HOM05D003765 ORTHO05D004561 2.8e-52 211.1 740 34.2
Lsat_1_v5_gn_2_130181 Lactuca sativa HOM05D003765 ORTHO05D004561 6.3e-52 209.9 702 32.5
Migut.F01159 Erythranthe guttata HOM05D003765 ORTHO05D004561 3.1e-51 207.6 656 31.6
THA.LOC104798744 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 5.3e-51 206.8 765 32.8
Oeu030257.1 Olea europaea HOM05D003765 ORTHO05D004561 7.0e-51 206.5 699 33.9
Lalb_Chr03g0034171 Lupinus albus HOM05D003765 ORTHO05D004561 9.1e-51 206.1 687 34.6
THA.LOC104811493 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 5.9e-50 203.4 676 33.6
Rhsim03G0174800 Rhododendron simsii HOM05D003765 ORTHO05D004561 6.5e-49 199.9 596 35.4
Medtr1g101910 Medicago truncatula HOM05D003765 ORTHO05D004561 1.5e-48 198.7 716 31.6
Lj2g0000316 Lotus japonicus HOM05D003765 ORTHO05D004561 7.2e-48 196.4 704 33.4
Glyma.16G200400 Glycine max HOM05D003765 ORTHO05D004561 9.4e-48 196.1 722 32.8
Nn6g34319 Nelumbo nucifera HOM05D003765 ORTHO05D004561 9.4e-48 196.1 806 31.1
MSTRG.114 Avicennia marina HOM05D003765 ORTHO05D004561 3.6e-47 194.1 714 32.4
Glyma.20G154100 Glycine max HOM05D003765 ORTHO05D004561 3.6e-47 194.1 731 31.7
DCAR_014604 Daucus carota HOM05D003765 ORTHO05D004561 1.8e-46 191.8 692 32.1
Lj5g0012460 Lotus japonicus HOM05D003765 ORTHO05D004561 3.0e-46 191.0 707 32.4
Ah.07g208800 Amaranthus hybridus HOM05D003765 ORTHO05D004561 6.8e-46 189.9 671 31.4
CDE04G3755 Ceratophyllum demersum HOM05D003765 ORTHO05D004561 6.8e-46 189.9 757 29.6
TPR.G21305 Trifolium pratense HOM05D003765 ORTHO05D004561 6.8e-46 189.9 674 31.8
Glyma.10G240600 Glycine max HOM05D003765 ORTHO05D004561 8.3e-44 183.0 772 30.6
COL.COLO4_14229 Corchorus olitorius HOM05D003765 ORTHO05D004561 1.1e-43 182.6 749 31.9
MBI04_g06623_MAGBIO Magnolia biondii HOM05D003765 ORTHO05D004561 1.8e-43 181.8 576 33.2
TPR.G17415 Trifolium pratense HOM05D003765 ORTHO05D004561 2.4e-43 181.4 721 31.8
Phvul.007G065400 Phaseolus vulgaris HOM05D003765 ORTHO05D004561 5.4e-43 180.3 700 32.7
ECA238G0747 Erigeron canadensis HOM05D003765 ORTHO05D004561 7.0e-43 179.9 731 30.4
HanXRQChr14g0461811 Helianthus annuus HOM05D003765 ORTHO05D004561 1.2e-42 179.1 674 31.2
Sp6g14100 Schrenkiella parvula HOM05D003765 ORTHO05D004561 4.5e-42 177.2 672 31.7
AUR62016059 Chenopodium quinoa HOM05D003765 ORTHO05D004561 1.3e-41 175.6 630 31.4
Lalb_Chr21g0304901 Lupinus albus HOM05D003765 ORTHO05D004561 1.7e-41 175.3 701 31.1
CDE07G1851 Ceratophyllum demersum HOM05D003765 ORTHO05D004561 8.5e-41 172.9 698 30.1
Thhalv10012958m.g Eutrema salsugineum HOM05D003765 ORTHO05D004561 8.5e-41 172.9 655 31.3
AL8G26150 Arabidopsis lyrata HOM05D003765 ORTHO05D004561 3.6e-39 167.5 647 33.2
CARHR264740 Cardamine hirsuta HOM05D003765 ORTHO05D004561 1.8e-38 165.2 617 31.9
Psat1g111440 Pisum sativum HOM05D003765 ORTHO05D004561 3.0e-38 164.5 691 30.0
DCAR_009410 Daucus carota HOM05D003765 ORTHO05D004561 4.0e-38 164.1 645 32.9
Hma1.2p1_0488F.1_g163950 Hydrangea macrophylla HOM05D003765 ORTHO05D004561 1.2e-37 162.5 620 33.7
Aa31LG3G8290 Aethionema arabicum HOM05D003765 ORTHO05D004561 2.8e-36 157.9 700 30.6
Lalb_Chr02g0140881 Lupinus albus HOM05D003765 ORTHO05D004561 6.3e-36 156.8 739 30.7
Sc19g0001750 Simmondsia chinensis HOM05D003765 ORTHO05D004561 8.3e-36 156.4 660 29.4
VMungo0720G0810 Vigna mungo HOM05D003765 ORTHO05D004561 1.8e-35 155.2 704 29.0
Dinv35140 Davidia involucrata HOM05D003765 ORTHO05D004561 4.1e-35 154.1 469 38.0
Medtr6g089530 Medicago truncatula HOM05D003765 ORTHO05D004561 1.6e-34 152.1 621 31.4
ECA232G3914 Erigeron canadensis HOM05D003765 ORTHO05D004561 2.0e-34 151.8 657 29.2
AT5G51850 Arabidopsis thaliana HOM05D003765 ORTHO05D004561 2.3e-33 148.3 653 30.6
arahy.Tifrunner.gnm1.ann1.G7HECD Arachis hypogaea HOM05D003765 ORTHO05D004561 2.3e-33 148.3 672 30.7
ClCG05G007700 Citrullus lanatus HOM05D003765 ORTHO05D004561 5.0e-33 147.1 642 30.4
arahy.Tifrunner.gnm1.ann1.S2H83J Arachis hypogaea HOM05D003765 ORTHO05D004561 1.9e-32 145.2 716 30.0
Ca_10812_v3 Cicer arietinum L. HOM05D003765 ORTHO05D004561 3.3e-32 144.4 681 29.5
Dinv28506 Davidia involucrata HOM05D003765 ORTHO05D004561 1.8e-30 138.7 443 37.0
Psat6g201640 Pisum sativum HOM05D003765 ORTHO05D004561 2.6e-29 134.8 645 29.5
CsaV3_3G016640 Cucumis sativus L. HOM05D003765 ORTHO05D004561 3.4e-29 134.4 657 29.2
MELO3C006859.2 Cucumis melo HOM05D003765 ORTHO05D004561 8.3e-28 129.8 664 28.9
Sed0025435 Sechium edule HOM05D003765 ORTHO05D004561 5.4e-27 127.1 642 27.6
SGA_v2.0_scaffold113G31787 Striga asiatica HOM05D003765 ORTHO05D004561 2.7e-26 124.8 659 27.5
Dinv28507 Davidia involucrata HOM05D003765 ORTHO05D004561 1.3e-25 122.5 118 50.8
Migut.F00398 Erythranthe guttata HOM05D003765 ORTHO05D004561 5.0e-25 120.6 215 38.1
SalBow4G0450 Salvia bowleyana HOM05D003765 ORTHO05D004561 7.3e-24 116.7 633 26.9
ATR0661G439 Amborella trichopoda HOM05D003765 ORTHO05D004561 3.4e-21 107.8 549 28.2
unitig_22.g5225 Utricularia gibba HOM05D003765 ORTHO05D004561 3.2e-19 101.3 217 34.1
A10p09680 Brassica napus HOM05D003765 ORTHO05D004561 1.2e-18 99.4 393 31.3
VMungo0464G1637 Vigna mungo HOM05D003765 ORTHO05D004561 2.7e-18 98.2 261 37.2
Carub.0008s1189 Capsella rubella HOM05D003765 ORTHO05D004561 4.6e-18 97.4 541 30.3
BraA10t43049Z Brassica rapa HOM05D003765 ORTHO05D004561 6.0e-18 97.1 393 31.0
VMungo0464G2043 Vigna mungo HOM05D003765 ORTHO05D004561 7.8e-18 96.7 207 34.3
SEGI_17592 Sequoiadendron giganteum HOM05D003765 ORTHO05D004561 3.9e-17 94.4 180 31.7
Sp7g23450 Schrenkiella parvula HOM05D003765 ORTHO05D004561 1.2e-15 89.4 335 30.4
BcaB08g35538 Brassica carinata HOM05D003765 ORTHO05D004561 2.1e-15 88.6 462 30.5
Thhalv10025080m.g Eutrema salsugineum HOM05D003765 ORTHO05D004561 6.2e-15 87.0 356 30.9
C09p41340 Brassica napus HOM05D003765 ORTHO05D004561 3.1e-14 84.7 397 30.2
BolC9t57009H Brassica oleracea HOM05D003765 ORTHO05D004561 3.1e-14 84.7 397 30.2
AUR62021267 Chenopodium quinoa HOM05D003765 ORTHO05D004561 1.5e-13 82.4 293 32.8
A08p21190 Brassica napus HOM05D003765 ORTHO05D004561 7.5e-13 80.1 363 30.3
BolC8t48608H Brassica oleracea HOM05D003765 ORTHO05D004561 9.8e-13 79.7 369 30.6
arahy.Tifrunner.gnm1.ann1.3X1084 Arachis hypogaea HOM05D003765 ORTHO05D004561 2.9e-12 78.2 726 26.4
BcaB03g12466 Brassica carinata HOM05D003765 ORTHO05D004561 2.9e-12 78.2 363 31.1
BraA08t34069Z Brassica rapa HOM05D003765 ORTHO05D004561 2.9e-12 78.2 363 30.0
BcaC07g38188 Brassica carinata HOM05D003765 ORTHO05D004561 4.9e-12 77.4 367 29.4
Lalb_Chr19g0131141 Lupinus albus HOM05D003765 ORTHO05D004561 8.3e-12 76.6 110 40.9
Dinv40025 Davidia involucrata HOM05D003765 ORTHO05D000169 1.1e-11 76.3 174 43.7
AT4G25430 Arabidopsis thaliana HOM05D003765 ORTHO05D023707 4.1e-11 74.3 406 28.3
arahy.Tifrunner.gnm1.ann1.XAW92V Arachis hypogaea HOM05D003765 ORTHO05D004561 1.6e-10 72.4 185 31.4
Sed0026899 Sechium edule HOM05D003765 ORTHO05D004561 2.7e-10 71.6 535 26.9
SEGI_23141 Sequoiadendron giganteum HOM05D002769 ORTHO05D001913 2.7e-10 71.6 242 24.4
unitig_37.g11944 Utricularia gibba HOM05D003765 ORTHO05D004561 2.7e-10 71.6 230 32.2
ClCG01G005340 Citrullus lanatus HOM05D003765 ORTHO05D004561 6.6e-09 67.0 280 30.0
Mapoly0151s0019 Marchantia polymorpha HOM05D002515 ORTHO05D002722 8.6e-09 66.6 198 28.3
SEGI_41162 Sequoiadendron giganteum HOM05D001693 ORTHO05D001588 1.1e-08 66.2 191 27.2
AagrBONN_evm.TU.Sc2ySwM_228.4044 Anthoceros agrestis HOM05D002515 ORTHO05D005796 1.9e-08 65.5 205 25.9
HanXRQChr15g0486221 Helianthus annuus HOM05D003765 ORTHO05D004561 1.9e-08 65.5 470 26.6
AL7G27690 Arabidopsis lyrata HOM05D003765 ORTHO05D004561 2.5e-08 65.1 333 29.4
A03p32820 Brassica napus HOM05D001693 ORTHO05D001588 5.6e-08 63.9 174 30.5
BraA03t12452Z Brassica rapa HOM05D001693 ORTHO05D001588 5.6e-08 63.9 197 29.4
SEGI_29651 Sequoiadendron giganteum HOM05D002769 ORTHO05D003160 1.6e-07 62.4 250 23.2
SEGI_39803 Sequoiadendron giganteum HOM05D002769 ORTHO05D003160 1.6e-07 62.4 177 27.1
BcaC03g18556 Brassica carinata HOM05D001693 ORTHO05D001588 4.7e-07 60.8 183 29.0
BolC3t16259H Brassica oleracea HOM05D001693 ORTHO05D001588 6.2e-07 60.5 197 28.9
C09p75560 Brassica napus HOM05D001693 ORTHO05D001588 1.1e-06 59.7 217 26.7
BolC5t35102H Brassica oleracea HOM05D001693 ORTHO05D001588 1.1e-06 59.7 214 26.6
HPP92_022144 Vanilla planifolia HOM05D003765 ORTHO05D004561 1.1e-06 59.7 183 29.0
Sabra09G0021700 Salix brachista HOM05D002515 ORTHO05D002722 1.4e-06 59.3 175 24.6
C03p39940 Brassica napus HOM05D001693 ORTHO05D001588 5.2e-06 57.4 197 28.4
Potri.009G030700 Populus trichocarpa HOM05D002515 ORTHO05D002722 5.2e-06 57.4 216 25.0
Os04g0106500 Oryza sativa ssp. japonica HOM05D003765 ORTHO05D004561 6.8e-06 57.0 572 24.8


User provided reference genes

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