Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G37750 Arabidopsis lyrata HOM05D009441 ORTHO05D010605 2.8e-88 328.6 165 100.0
AT5G61110 Arabidopsis thaliana HOM05D009441 ORTHO05D010605 1.3e-48 196.8 172 70.3
Carub.0008s2178 Capsella rubella HOM05D009441 ORTHO05D010605 7.9e-22 107.8 115 55.7
CARHR274800 Cardamine hirsuta HOM05D009441 ORTHO05D010605 4.8e-19 98.6 178 43.8
AL8G37740 Arabidopsis lyrata HOM05D009441 ORTHO05D010605 1.3e-16 90.5 125 47.2
C02p61360 Brassica napus HOM05D009441 ORTHO05D010605 9.3e-15 84.3 73 53.4
BraA02t09085Z Brassica rapa HOM05D009441 ORTHO05D010605 9.3e-15 84.3 73 53.4
A02p41420 Brassica napus HOM05D009441 ORTHO05D010605 2.7e-14 82.8 73 52.1
AT5G61100 Arabidopsis thaliana HOM05D009441 ORTHO05D010605 4.6e-14 82.0 133 45.9
BolC2t12185H Brassica oleracea HOM05D009441 ORTHO05D010605 1.3e-13 80.5 73 52.1
Carub.0008s2177 Capsella rubella HOM05D009441 ORTHO05D010605 8.7e-13 77.8 112 41.1
CARHR274790 Cardamine hirsuta HOM05D009441 ORTHO05D010605 2.8e-11 72.8 110 42.7
Sp6g34940 Schrenkiella parvula HOM05D009441 ORTHO05D010605 4.0e-10 68.9 73 42.5
BcaB07g34219 Brassica carinata HOM05D007909 ORTHO05D010605 2.0e-09 66.6 164 30.5
AL6G18350 Arabidopsis lyrata HOM05D009441 ORTHO05D010605 7.6e-09 64.7 130 35.4
BolC2t12184H Brassica oleracea HOM05D009441 ORTHO05D010605 2.9e-08 62.8 71 40.8
AT5G08005 Arabidopsis thaliana HOM05D009441 ORTHO05D010605 3.8e-08 62.4 130 30.8
A10p28620 Brassica napus HOM05D009441 ORTHO05D010605 3.8e-08 62.4 132 31.1
Carub.0006s0689 Capsella rubella HOM05D009441 ORTHO05D010605 3.8e-08 62.4 56 46.4
C09p68910 Brassica napus HOM05D009441 ORTHO05D010605 4.9e-08 62.0 132 31.1
CARHR205180 Cardamine hirsuta HOM05D009441 ORTHO05D010605 4.9e-08 62.0 48 54.2
BraA10t44911Z Brassica rapa HOM05D009441 ORTHO05D010605 6.5e-08 61.6 130 31.5
Aa31LG3G18530 Aethionema arabicum HOM05D000016 ORTHO05D000487 1.9e-07 60.1 130 30.8
BcaC03g18076 Brassica carinata HOM05D009441 ORTHO05D010605 1.9e-07 60.1 73 38.4
C07p44810 Brassica napus HOM05D007909 ORTHO05D010605 3.2e-07 59.3 48 50.0
BraA03t13799Z Brassica rapa HOM05D007909 ORTHO05D010605 3.2e-07 59.3 47 51.1
Sp2g24365 Schrenkiella parvula HOM05D007909 ORTHO05D010605 3.2e-07 59.3 174 32.2
A02p41410 Brassica napus HOM05D009441 ORTHO05D010605 4.2e-07 58.9 73 37.0
BraA02t09084Z Brassica rapa HOM05D009441 ORTHO05D010605 5.5e-07 58.5 73 37.0
EL10Ac5g11120 Beta vulgaris HOM05D015602 ORTHO05D006373 7.1e-07 58.2 59 42.4
ECA247G2835 Erigeron canadensis HOM05D001093 ORTHO05D000743 7.1e-07 58.2 48 47.9
QL10p019356 Quercus lobata HOM05D001093 ORTHO05D010605 7.1e-07 58.2 52 42.3
Duzib084G0418 Durio zibethinus HOM05D000539 ORTHO05D000233 9.3e-07 57.8 51 43.1
Manes.06G085200 Manihot esculenta HOM05D007909 ORTHO05D010605 9.3e-07 57.8 52 42.3
Ciclev10020157m.g Citrus clementina HOM05D001093 ORTHO05D010605 1.6e-06 57.0 55 38.2
Duzib205G1796 Durio zibethinus HOM05D001093 ORTHO05D010605 1.6e-06 57.0 51 41.2
A03p46770 Brassica napus HOM05D007909 ORTHO05D010605 2.7e-06 56.2 141 29.1
CANSAT80G0086 Cannabis sativa HOM05D007909 ORTHO05D000743 2.7e-06 56.2 68 38.2
Gohir.A12G182300 Gossypium hirsutum HOM05D004287 ORTHO05D004569 2.7e-06 56.2 75 34.7
Gohir.D12G185200 Gossypium hirsutum HOM05D004287 ORTHO05D004569 4.6e-06 55.5 97 29.9
Gorai.008G198600 Gossypium raimondii HOM05D004287 ORTHO05D004569 4.6e-06 55.5 97 29.9
EL10Ac5g11122 Beta vulgaris HOM05D001093 ORTHO05D000743 7.9e-06 54.7 95 29.5


User provided reference genes

Program Settings