Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G37010 Arabidopsis lyrata HOM05D007887 ORTHO05D009725 6.9e-47 190.3 95 100.0
Carub.0008s2111 Capsella rubella HOM05D007887 ORTHO05D009725 3.4e-38 161.4 95 84.2
AT5G60400 Arabidopsis thaliana HOM05D007887 ORTHO05D009725 5.9e-38 160.6 95 88.4
BcaB08g36339 Brassica carinata HOM05D007887 ORTHO05D009725 4.1e-31 137.9 104 74.0
BolC9t58177H Brassica oleracea HOM05D007887 ORTHO05D009725 7.0e-31 137.1 104 71.2
A10p17620 Brassica napus HOM05D007887 ORTHO05D009725 2.0e-30 135.6 104 71.2
BraA10t43842Z Brassica rapa HOM05D007887 ORTHO05D009725 2.0e-30 135.6 104 71.2
BcaC04g19700 Brassica carinata HOM05D007887 ORTHO05D009725 2.6e-30 135.2 104 71.2
C09p53030 Brassica napus HOM05D007887 ORTHO05D009725 2.6e-30 135.2 104 71.2
BraA02t05730Z Brassica rapa HOM05D007887 ORTHO05D009725 3.5e-30 134.8 102 74.5
BcaC03g13976 Brassica carinata HOM05D007887 ORTHO05D009725 1.0e-29 133.3 102 73.5
BolC2t07269H Brassica oleracea HOM05D007887 ORTHO05D009725 1.0e-29 133.3 102 73.5
C02p11720 Brassica napus HOM05D007887 ORTHO05D009725 2.2e-29 132.1 102 73.5
Thhalv10015113m.g Eutrema salsugineum HOM05D007887 ORTHO05D009725 2.9e-29 131.7 99 70.7
CARHR274070 Cardamine hirsuta HOM05D007887 ORTHO05D009725 5.0e-29 131.0 95 75.8
BcaB05g22638 Brassica carinata HOM05D007887 ORTHO05D009725 1.5e-28 129.4 103 71.8
C03p12840 Brassica napus HOM05D007887 ORTHO05D009725 2.1e-27 125.6 102 70.6
Sp6g21990 Schrenkiella parvula HOM05D007887 ORTHO05D009725 2.1e-27 125.6 105 70.5
BolC3t13748H Brassica oleracea HOM05D007887 ORTHO05D009725 6.1e-27 124.0 102 69.6
BcaB01g04657 Brassica carinata HOM05D007887 ORTHO05D009725 1.4e-26 122.9 100 67.0
BraA02t05732Z Brassica rapa HOM05D007887 ORTHO05D009725 2.6e-25 118.6 104 65.4
BraA03t10429Z Brassica rapa HOM05D007887 ORTHO05D009725 2.6e-25 118.6 100 67.0
A03p11140 Brassica napus HOM05D007887 ORTHO05D009725 7.5e-25 117.1 101 66.3
Aa31LG1G12450 Aethionema arabicum HOM05D007887 ORTHO05D009725 1.4e-23 112.8 97 67.0
BolC2t07271H Brassica oleracea HOM05D007887 ORTHO05D009725 1.8e-23 112.5 95 65.3
THA.LOC104799488 Tarenaya hassleriana HOM05D007887 ORTHO05D009725 1.7e-13 79.3 104 46.2
FAN11G2401 Fragaria x ananassa HOM05D007887 ORTHO05D009725 1.3e-08 63.2 93 45.2
Lalb_Chr03g0027141 Lupinus albus HOM05D007887 ORTHO05D009725 1.3e-08 63.2 90 46.7
Medtr4g060620 Medicago truncatula HOM05D007887 ORTHO05D009725 1.7e-08 62.8 92 41.3
Glyma.11G153796 Glycine max HOM05D007887 ORTHO05D009725 3.7e-08 61.6 98 41.8
Haze_23901 Corylus avellana HOM05D007887 ORTHO05D009725 8.3e-08 60.5 96 42.7
FvH4_3g33040 Fragaria vesca HOM05D007887 ORTHO05D009725 8.3e-08 60.5 93 44.1
Actinidia24082 Actinidia chinensis HOM05D007887 ORTHO05D009725 1.1e-07 60.1 92 42.4
Cfa011356 Carpinus fangiana HOM05D007887 ORTHO05D009725 1.1e-07 60.1 96 44.8
MD03G1112500 Malus domestica HOM05D007887 ORTHO05D009725 1.1e-07 60.1 95 44.2
Prupe.6G095800 Prunus persica HOM05D007887 ORTHO05D009725 1.1e-07 60.1 96 44.8
CSS0010599 Camellia sinensis var. sinensis HOM05D007887 ORTHO05D009725 1.4e-07 59.7 97 44.3
Manes.11G141900 Manihot esculenta HOM05D007887 ORTHO05D009725 1.4e-07 59.7 92 43.5
PGR119G2346 Punica granatum HOM05D007887 ORTHO05D009725 1.4e-07 59.7 95 42.1
CSS0013187 Camellia sinensis var. sinensis HOM05D007887 ORTHO05D009725 2.4e-07 58.9 97 44.3
CiPaw.13G108000 Carya illinoinensis HOM05D007887 ORTHO05D009725 3.1e-07 58.5 92 45.7
Lalb_Chr19g0137421 Lupinus albus HOM05D007887 ORTHO05D009725 3.1e-07 58.5 93 44.1
FAN16G3357 Fragaria x ananassa HOM05D007887 ORTHO05D009725 4.1e-07 58.2 93 43.0
CANSAT54G2812 Cannabis sativa HOM05D007887 ORTHO05D009725 5.4e-07 57.8 51 51.0
FAN25G1511 Fragaria x ananassa HOM05D007887 ORTHO05D009725 5.4e-07 57.8 94 41.5
Cc01_g11470 Coffea canephora HOM05D007887 ORTHO05D009725 7.0e-07 57.4 105 39.0
MD11G1131400 Malus domestica HOM05D007887 ORTHO05D009725 9.2e-07 57.0 96 43.8
PSO339G0915 Papaver somniferum HOM05D007887 ORTHO05D009725 1.2e-06 56.6 98 40.8
C02p11740 Brassica napus HOM05D007887 ORTHO05D009725 1.6e-06 56.2 52 59.6
Psat7g222640 Pisum sativum HOM05D007887 ORTHO05D009725 1.6e-06 56.2 89 40.4
TAR633G0435 Trochodendron aralioides HOM05D007887 ORTHO05D009725 2.7e-06 55.5 41 58.5
RcHm_v2.0_Chr5g0060411 Rosa chinensis HOM05D007887 ORTHO05D009725 3.5e-06 55.1 92 41.3
Glyma.12G071500 Glycine max HOM05D007887 ORTHO05D009725 4.5e-06 54.7 90 41.1
GSVIVG01025148001 Vitis vinifera HOM05D007887 ORTHO05D009725 4.5e-06 54.7 73 39.7
TPR.G36408 Trifolium pratense HOM05D007887 ORTHO05D009725 5.9e-06 54.3 86 38.4


User provided reference genes

Program Settings