Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G36590 Arabidopsis lyrata HOM05D008865 ORTHO05D011106 4.9e-81 304.3 141 100.0
AT5G60000 Arabidopsis thaliana HOM05D008865 ORTHO05D011106 8.4e-73 276.9 141 90.8
Carub.0008s2070 Capsella rubella HOM05D008865 ORTHO05D011106 2.1e-63 245.7 141 82.3
AL6G34100 Arabidopsis lyrata HOM05D008865 ORTHO05D011106 1.9e-37 159.5 139 56.1
Carub.0006s2074 Capsella rubella HOM05D008865 ORTHO05D011106 1.1e-35 153.7 140 55.7
AT5G22970 Arabidopsis thaliana HOM05D008865 ORTHO05D011106 1.3e-33 146.7 139 51.8
CARHR190570 Cardamine hirsuta HOM05D008865 ORTHO05D011106 8.5e-33 144.1 140 52.9
THA.LOC104811283 Tarenaya hassleriana HOM05D008865 ORTHO05D011106 1.9e-32 142.9 111 58.6
Aa31LG7G12520 Aethionema arabicum HOM05D008865 ORTHO05D011106 2.7e-31 139.0 141 48.9
BraA06t24016Z Brassica rapa HOM05D008865 ORTHO05D011106 3.0e-30 135.6 143 47.6
BcaC04g19616 Brassica carinata HOM05D008865 ORTHO05D011106 1.5e-29 133.3 144 46.5
C09p53610 Brassica napus HOM05D008865 ORTHO05D011106 1.5e-29 133.3 144 46.5
BolC9t58237H Brassica oleracea HOM05D008865 ORTHO05D011106 1.5e-29 133.3 144 46.5
A10p18060 Brassica napus HOM05D008865 ORTHO05D011106 2.2e-28 129.4 144 45.8
Thhalv10015539m.g Eutrema salsugineum HOM05D008865 ORTHO05D011106 2.2e-28 129.4 140 49.3
Sp6g22410 Schrenkiella parvula HOM05D008865 ORTHO05D011106 3.7e-28 128.6 136 47.8
BraA10t43880Z Brassica rapa HOM05D008865 ORTHO05D011106 1.4e-27 126.7 144 45.1
A03p10990 Brassica napus HOM05D008865 ORTHO05D011106 1.2e-26 123.6 149 47.0
BraA03t10412Z Brassica rapa HOM05D008865 ORTHO05D011106 1.2e-26 123.6 149 47.0
BraA03t10413Z Brassica rapa HOM05D008865 ORTHO05D011106 1.2e-26 123.6 149 47.0
BcaB08g36386 Brassica carinata HOM05D008865 ORTHO05D011106 1.0e-25 120.6 144 42.4
BcaB08g36388 Brassica carinata HOM05D008865 ORTHO05D011106 1.0e-25 120.6 144 42.4
BcaB08g36389 Brassica carinata HOM05D008865 ORTHO05D011106 1.0e-25 120.6 144 42.4
A03p11010 Brassica napus HOM05D008865 ORTHO05D011106 1.0e-25 120.6 149 46.3
BcaB01g04678 Brassica carinata HOM05D008865 ORTHO05D011106 2.9e-25 119.0 149 47.0
BcaB01g04681 Brassica carinata HOM05D008865 ORTHO05D011106 6.5e-25 117.9 138 48.6
BraA03t10408Z Brassica rapa HOM05D008865 ORTHO05D011106 2.7e-23 112.5 140 44.3
BcaC01g06558 Brassica carinata HOM05D008865 ORTHO05D011106 2.3e-22 109.4 149 43.6
C03p12650 Brassica napus HOM05D008865 ORTHO05D011106 2.3e-22 109.4 149 43.6
C03p12670 Brassica napus HOM05D008865 ORTHO05D011106 2.3e-22 109.4 149 43.6
BolC3t13733H Brassica oleracea HOM05D008865 ORTHO05D011106 2.3e-22 109.4 149 43.6
Thecc.09G331500 Theobroma cacao HOM05D008865 ORTHO05D011106 6.1e-15 84.7 140 35.0
BcaC01g06556 Brassica carinata HOM05D008865 ORTHO05D011106 3.0e-14 82.4 118 42.4
BraA03t10415Z Brassica rapa HOM05D008865 ORTHO05D011106 4.8e-12 75.1 67 53.7
A03p10980 Brassica napus HOM05D008865 ORTHO05D011106 2.6e-10 69.3 61 55.7
BraA03t10409Z Brassica rapa HOM05D008865 ORTHO05D011106 2.6e-10 69.3 61 55.7
BolC3t13736H Brassica oleracea HOM05D008865 ORTHO05D011106 3.2e-08 62.4 67 44.8
C03p12700 Brassica napus HOM05D008865 ORTHO05D011106 9.4e-08 60.8 67 44.8


User provided reference genes

Program Settings