Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G34580 Arabidopsis lyrata HOM05D000031 ORTHO05D011033 1.1e-57 226.5 118 100.0
AL2G20250 Arabidopsis lyrata HOM05D000031 ORTHO05D011033 2.7e-32 142.1 99 81.8
AL2G20170 Arabidopsis lyrata HOM05D000031 ORTHO05D011033 5.1e-31 137.9 97 80.4
AL2G20160 Arabidopsis lyrata HOM05D000031 ORTHO05D011033 2.6e-27 125.6 115 64.3
AT1G65250 Arabidopsis thaliana HOM05D000031 ORTHO05D011033 1.1e-22 110.2 74 81.1
AT1G65190 Arabidopsis thaliana HOM05D000031 ORTHO05D011033 4.8e-21 104.8 70 78.6
CARHR056890 Cardamine hirsuta HOM05D000031 ORTHO05D011033 5.3e-20 101.3 74 71.6
CARHR056880 Cardamine hirsuta HOM05D000031 ORTHO05D011033 9.0e-20 100.5 92 65.2
Carub.0002s1090 Capsella rubella HOM05D000031 ORTHO05D011033 1.5e-19 99.8 75 66.7
Carub.0002s1079 Capsella rubella HOM05D000031 ORTHO05D011033 9.9e-19 97.1 73 71.2
Carub.0002s1080 Capsella rubella HOM05D000031 ORTHO05D011033 2.9e-18 95.5 88 59.1
Carub.0002s1088 Capsella rubella HOM05D000031 ORTHO05D011033 1.9e-17 92.8 73 65.8
Carub.0002s1091 Capsella rubella HOM05D000031 ORTHO05D011033 4.2e-17 91.7 74 62.2
Carub.0002s1078 Capsella rubella HOM05D000031 ORTHO05D011033 9.3e-17 90.5 73 68.5
Carub.0002s1085 Capsella rubella HOM05D000031 ORTHO05D011033 4.6e-16 88.2 72 63.9
Carub.0002s1087 Capsella rubella HOM05D000031 ORTHO05D011033 1.8e-15 86.3 59 71.2
Carub.0002s1092 Capsella rubella HOM05D000031 ORTHO05D011033 2.3e-15 85.9 66 69.7
Carub.0002s1082 Capsella rubella HOM05D000031 ORTHO05D011033 6.7e-15 84.3 64 68.8
AT1G67470 Arabidopsis thaliana HOM05D000031 ORTHO05D011033 3.3e-14 82.0 101 49.5
CARHR056870 Cardamine hirsuta HOM05D000031 ORTHO05D011033 7.4e-14 80.9 70 61.4
Carub.0002s1086 Capsella rubella HOM05D000031 ORTHO05D011033 2.1e-13 79.3 59 67.8
Carub.0002s1081 Capsella rubella HOM05D000031 ORTHO05D011033 4.8e-13 78.2 61 67.2
Carub.0002s1089 Capsella rubella HOM05D000031 ORTHO05D011033 2.4e-12 75.9 59 64.4
BcaNung04394 Brassica carinata HOM05D000031 ORTHO05D001033 5.3e-12 74.7 64 56.2
BcaC08g44855 Brassica carinata HOM05D000031 ORTHO05D011033 2.0e-11 72.8 72 56.9
C06p24650 Brassica napus HOM05D000031 ORTHO05D011033 2.0e-11 72.8 72 56.9
Carub.0002s1083 Capsella rubella HOM05D000031 ORTHO05D011033 2.0e-11 72.8 63 68.3
THA.LOC104802354 Tarenaya hassleriana HOM05D000031 ORTHO05D001033 2.6e-11 72.4 71 54.9
Carub.0006s2712 Capsella rubella HOM05D000031 ORTHO05D001033 4.5e-11 71.6 65 52.3
AL2G20310 Arabidopsis lyrata HOM05D000031 ORTHO05D011033 7.6e-11 70.9 43 79.1
A05p02850 Brassica napus HOM05D000031 ORTHO05D001033 7.6e-11 70.9 65 58.5
BcaC02g12476 Brassica carinata HOM05D000031 ORTHO05D001033 9.9e-11 70.5 65 56.9
BolC4t21982H Brassica oleracea HOM05D000031 ORTHO05D001033 9.9e-11 70.5 65 56.9
AT3G57640 Arabidopsis thaliana HOM05D000031 ORTHO05D011033 1.7e-10 69.7 67 56.7
BcaC02g08482 Brassica carinata HOM05D000031 ORTHO05D011033 1.7e-10 69.7 66 53.0
C04p03480 Brassica napus HOM05D000031 ORTHO05D001033 1.7e-10 69.7 65 56.9
C04p53870 Brassica napus HOM05D000031 ORTHO05D011033 1.7e-10 69.7 66 53.0
BolC4t26938H Brassica oleracea HOM05D000031 ORTHO05D011033 1.7e-10 69.7 66 53.0
THA.LOC104804887 Tarenaya hassleriana HOM05D000031 ORTHO05D001033 2.4e-09 65.9 53 64.2
BcaC07g40338 Brassica carinata HOM05D000031 ORTHO05D001033 3.2e-09 65.5 64 54.7
A09p50680 Brassica napus HOM05D000031 ORTHO05D001033 3.2e-09 65.5 64 54.7
BraA09t40516Z Brassica rapa HOM05D000031 ORTHO05D001033 3.2e-09 65.5 64 54.7
AL4G40700 Arabidopsis lyrata HOM05D000031 ORTHO05D001033 5.5e-09 64.7 92 44.6
CARHR168060 Cardamine hirsuta HOM05D000031 ORTHO05D001033 1.2e-08 63.5 65 49.2
C04p03120 Brassica napus HOM05D000031 ORTHO05D001033 1.6e-08 63.2 63 50.8
C08p33370 Brassica napus HOM05D000031 ORTHO05D001033 2.7e-08 62.4 64 53.1
BolC8t50937H Brassica oleracea HOM05D000031 ORTHO05D001033 2.7e-08 62.4 64 53.1
AL5G39390 Arabidopsis lyrata HOM05D000031 ORTHO05D001033 3.5e-08 62.0 65 52.3
BcaNung07197 Brassica carinata HOM05D000031 ORTHO05D001033 3.5e-08 62.0 65 49.2
AT3G57740 Arabidopsis thaliana HOM05D000031 ORTHO05D001033 7.9e-08 60.8 65 49.2
CARHR168040 Cardamine hirsuta HOM05D000031 ORTHO05D001033 1.3e-07 60.1 66 48.5
BolC4t21953H Brassica oleracea HOM05D000031 ORTHO05D001033 3.0e-07 58.9 63 49.2
Carub.0005s2459 Capsella rubella HOM05D000031 ORTHO05D001033 3.9e-07 58.5 65 47.7
Thhalv10006056m.g Eutrema salsugineum HOM05D000031 ORTHO05D001033 3.9e-07 58.5 65 52.3
Carub.0003s2022 Capsella rubella HOM05D000031 ORTHO05D011033 6.7e-07 57.8 71 50.7
C02p64160 Brassica napus HOM05D000031 ORTHO05D011033 1.9e-06 56.2 60 55.0
BolC2t12480H Brassica oleracea HOM05D000031 ORTHO05D011033 3.3e-06 55.5 59 55.9
BraA02t09321Z Brassica rapa HOM05D000031 ORTHO05D011033 3.3e-06 55.5 61 54.1
THA.LOC104824581 Tarenaya hassleriana HOM05D000031 ORTHO05D001033 3.3e-06 55.5 83 39.8


User provided reference genes

Program Settings