Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G33910 Arabidopsis lyrata HOM05D006914 ORTHO05D008583 2.7e-43 178.3 94 100.0
Carub.0008s1839 Capsella rubella HOM05D006914 ORTHO05D008583 2.5e-41 171.8 94 94.7
AT5G57860 Arabidopsis thaliana HOM05D006914 ORTHO05D008583 3.3e-41 171.4 94 94.7
Sp6g19550 Schrenkiella parvula HOM05D006914 ORTHO05D008583 4.3e-41 171.0 94 94.7
CARHR271600 Cardamine hirsuta HOM05D006914 ORTHO05D008583 9.6e-41 169.9 94 93.6
Thhalv10015128m.g Eutrema salsugineum HOM05D006914 ORTHO05D008583 1.3e-40 169.5 94 93.6
A03p12500 Brassica napus HOM05D006914 ORTHO05D008583 2.6e-38 161.8 94 87.2
BraA03t10565Z Brassica rapa HOM05D006914 ORTHO05D008583 2.6e-38 161.8 94 87.2
BolC3t13912H Brassica oleracea HOM05D006914 ORTHO05D008583 3.4e-38 161.4 94 87.2
C02p13800 Brassica napus HOM05D006914 ORTHO05D008583 1.3e-37 159.5 94 88.3
BolC2t07499H Brassica oleracea HOM05D006914 ORTHO05D008583 1.3e-37 159.5 94 88.3
C09p49750 Brassica napus HOM05D006914 ORTHO05D008583 1.7e-37 159.1 94 88.3
A02p08150 Brassica napus HOM05D006914 ORTHO05D008583 2.2e-37 158.7 94 87.2
Aa31LG3G13700 Aethionema arabicum HOM05D006914 ORTHO05D008583 7.1e-36 153.7 93 83.9
CiPaw.15G165400 Carya illinoinensis HOM05D006914 ORTHO05D008583 7.9e-35 150.2 90 83.3
Thecc.09G152600 Theobroma cacao HOM05D006914 ORTHO05D008583 1.0e-34 149.8 90 83.3
Cpa.g.sc46.184 Carica papaya HOM05D006914 ORTHO05D008583 1.3e-34 149.4 90 83.3
Atru.chr7.325 Acer truncatum HOM05D006914 ORTHO05D008583 3.9e-34 147.9 90 81.1
Gohir.D08G256600 Gossypium hirsutum HOM05D006914 ORTHO05D008583 3.9e-34 147.9 90 82.2
Gorai.004G273700 Gossypium raimondii HOM05D006914 ORTHO05D008583 3.9e-34 147.9 90 82.2
COL.COLO4_23940 Corchorus olitorius HOM05D006914 ORTHO05D008583 6.7e-34 147.1 90 82.2
CANSAT56G0295 Cannabis sativa HOM05D006914 ORTHO05D008583 8.7e-34 146.7 90 83.3
CSS0049762 Camellia sinensis var. sinensis HOM05D006914 ORTHO05D008583 1.5e-33 146.0 90 80.0
Duzib150G1072 Durio zibethinus HOM05D006914 ORTHO05D008583 1.5e-33 146.0 90 81.1
Dinv41349 Davidia involucrata HOM05D006914 ORTHO05D008583 1.9e-33 145.6 90 78.9
AUR62015440 Chenopodium quinoa HOM05D006914 ORTHO05D008583 3.3e-33 144.8 90 81.1
Duzib187G0910 Durio zibethinus HOM05D006914 ORTHO05D008583 3.3e-33 144.8 90 81.1
GSVIVG01008452001 Vitis vinifera HOM05D006914 ORTHO05D008583 3.3e-33 144.8 89 79.8
TWI34G0278 Tripterygium wilfordii HOM05D006914 ORTHO05D008583 5.6e-33 144.1 90 81.1
Ciclev10009995m.g Citrus clementina HOM05D006914 ORTHO05D008583 7.4e-33 143.7 90 77.8
Nn8g40004 Nelumbo nucifera HOM05D006914 ORTHO05D008583 7.4e-33 143.7 90 80.0
EL10Ac3g05865 Beta vulgaris HOM05D006914 ORTHO05D008583 9.6e-33 143.3 90 80.0
DCAR_019414 Daucus carota HOM05D006346 ORTHO05D007910 9.6e-33 143.3 90 77.8
QL02p093962 Quercus lobata HOM05D006914 ORTHO05D008583 9.6e-33 143.3 90 80.0
Hund04582 Selenicereus undatus HOM05D000185 ORTHO05D000105 9.6e-33 143.3 90 77.8
Cfa020795 Carpinus fangiana HOM05D006914 ORTHO05D008583 1.6e-32 142.5 90 76.7
AUR62002229 Chenopodium quinoa HOM05D006914 ORTHO05D008583 1.6e-32 142.5 90 80.0
Actinidia28379 Actinidia chinensis HOM05D006914 ORTHO05D008583 2.1e-32 142.1 89 79.8
RcHm_v2.0_Chr2g0085261 Rosa chinensis HOM05D006914 ORTHO05D008583 2.1e-32 142.1 90 80.0
TAR383G0505 Trochodendron aralioides HOM05D006914 ORTHO05D008583 2.1e-32 142.1 93 76.3
Hma1.2p1_2085F.1_g313670 Hydrangea macrophylla HOM05D006914 ORTHO05D008583 2.8e-32 141.7 90 75.6
Peaxi162Scf00156g01316 Petunia axillaris HOM05D006914 ORTHO05D008583 4.8e-32 141.0 90 77.8
FAN23G1758 Fragaria x ananassa HOM05D006914 ORTHO05D008583 6.2e-32 140.6 90 77.8
Nitab4.5_0009003g0040 Nicotiana tabacum HOM05D006914 ORTHO05D008583 6.2e-32 140.6 90 76.7
Aqoxy5G02159 Aquilegia oxysepala HOM05D006914 ORTHO05D008583 8.1e-32 140.2 89 78.7
Prupe.7G265800 Prunus persica HOM05D006914 ORTHO05D008583 8.1e-32 140.2 90 80.0
TWI63G1652 Tripterygium wilfordii HOM05D006914 ORTHO05D008583 8.1e-32 140.2 90 76.7
BcaB05g22379 Brassica carinata HOM05D006914 ORTHO05D008583 1.1e-31 139.8 94 80.9
HanXRQChr03g0066101 Helianthus annuus HOM05D006914 ORTHO05D008583 1.1e-31 139.8 90 78.9
Nitab4.5_0001448g0020 Nicotiana tabacum HOM05D006914 ORTHO05D008583 1.4e-31 139.4 90 75.6
Potri.006G181400 Populus trichocarpa HOM05D006914 ORTHO05D008583 1.4e-31 139.4 90 78.9
MD15G1149500 Malus domestica HOM05D006914 ORTHO05D008583 1.8e-31 139.0 90 78.9
Actinidia23563 Actinidia chinensis HOM05D006914 ORTHO05D008583 2.4e-31 138.7 90 76.7
FAN26G2758 Fragaria x ananassa HOM05D006914 ORTHO05D008583 3.1e-31 138.3 89 77.5
CsaV3_2G007660 Cucumis sativus L. HOM05D006914 ORTHO05D008583 4.0e-31 137.9 90 76.7
ECA240G0809 Erigeron canadensis HOM05D006914 ORTHO05D008583 5.3e-31 137.5 90 76.7
MD02G1005200 Malus domestica HOM05D006914 ORTHO05D008583 5.3e-31 137.5 90 77.8
Cc06_g14590 Coffea canephora HOM05D006914 ORTHO05D008583 6.9e-31 137.1 90 75.6
MELO3C004120.2 Cucumis melo HOM05D006914 ORTHO05D008583 9.0e-31 136.7 90 75.6
Lsat_1_v5_gn_7_49520 Lactuca sativa HOM05D006914 ORTHO05D008583 9.0e-31 136.7 90 75.6
Manes.14G142700 Manihot esculenta HOM05D006914 ORTHO05D008583 1.2e-30 136.3 90 75.6
Ah.13g066550 Amaranthus hybridus HOM05D006914 ORTHO05D008583 1.5e-30 136.0 90 76.7
PGR102G2895 Punica granatum HOM05D006914 ORTHO05D008583 1.5e-30 136.0 90 72.2
Nitab4.5_0000233g0040 Nicotiana tabacum HOM05D006914 ORTHO05D008583 2.0e-30 135.6 90 74.4
ClCG02G014340 Citrullus lanatus HOM05D006914 ORTHO05D008583 2.6e-30 135.2 90 74.4
FvH4_1g00640 Fragaria vesca HOM05D006914 ORTHO05D008583 2.6e-30 135.2 90 75.6
Glyma.04G155300 Glycine max HOM05D006914 ORTHO05D008583 2.6e-30 135.2 90 75.6
Ca_02367_v3 Cicer arietinum L. HOM05D006914 ORTHO05D008583 3.4e-30 134.8 90 75.6
PSO111G0010 Papaver somniferum HOM05D006914 ORTHO05D008583 3.4e-30 134.8 89 74.2
Oeu055276.1 Olea europaea HOM05D006914 ORTHO05D008583 4.5e-30 134.4 93 73.1
BraA02t05889Z Brassica rapa HOM05D006914 ORTHO05D008583 7.6e-30 133.7 153 54.2
Sopen05g034470 Solanum pennellii HOM05D006914 ORTHO05D008583 7.6e-30 133.7 89 77.5
Glyma.06G225000 Glycine max HOM05D006914 ORTHO05D008583 9.9e-30 133.3 90 74.4
Os03g0364000 Oryza sativa ssp. japonica HOM05D006914 ORTHO05D008583 1.3e-29 132.9 94 74.5
Oeu021334.1 Olea europaea HOM05D006914 ORTHO05D008583 3.8e-29 131.3 93 71.0
HPP92_020604 Vanilla planifolia HOM05D006914 ORTHO05D008583 4.9e-29 131.0 91 71.4
Sed0026010 Sechium edule HOM05D006914 ORTHO05D008583 6.4e-29 130.6 90 73.3
Phvul.007G242700 Phaseolus vulgaris HOM05D006914 ORTHO05D008583 8.4e-29 130.2 90 72.2
Lalb_Chr11g0072501 Lupinus albus HOM05D006914 ORTHO05D008583 1.1e-28 129.8 90 74.4
TPR.G25932 Trifolium pratense HOM05D006914 ORTHO05D008583 1.1e-28 129.8 90 71.1
ATR0763G197 Amborella trichopoda HOM05D006914 ORTHO05D008583 1.4e-28 129.4 89 68.5
Sed0012601 Sechium edule HOM05D006914 ORTHO05D008583 1.4e-28 129.4 90 72.2
MSTRG.10711 Avicennia marina HOM05D006914 ORTHO05D008583 1.9e-28 129.0 89 71.9
VMungo0720G1978 Vigna mungo HOM05D006914 ORTHO05D008583 1.9e-28 129.0 90 72.2
Lj6g0027463 Lotus japonicus HOM05D006914 ORTHO05D008583 3.2e-28 128.3 90 71.1
Psat1g017920 Pisum sativum HOM05D006914 ORTHO05D008583 1.6e-27 125.9 90 71.1
Migut.K00305 Erythranthe guttata HOM05D006914 ORTHO05D008583 2.1e-27 125.6 90 70.0
unitig_748.g7196 Utricularia gibba HOM05D006914 ORTHO05D008583 2.1e-27 125.6 89 71.9
Zm00001eb329210 Zea mays HOM05D006914 ORTHO05D008583 2.1e-27 125.6 93 68.8
Medtr2g046160 Medicago truncatula HOM05D006914 ORTHO05D008583 2.3e-26 122.1 90 65.6
Haze_19153 Corylus avellana HOM05D006914 ORTHO05D008583 2.5e-25 118.6 74 79.7
TAR626G0439 Trochodendron aralioides HOM05D006914 ORTHO05D008583 3.3e-25 118.2 74 79.7
CDE05G0490 Ceratophyllum demersum HOM05D006914 ORTHO05D008583 7.4e-25 117.1 89 66.3
Rhsim03G0258700 Rhododendron simsii HOM05D000079 ORTHO05D000211 1.6e-24 115.9 74 79.7
Eucgr.C02509 Eucalyptus grandis HOM05D006914 ORTHO05D008583 2.4e-23 112.1 74 78.4
SGA_v2.0_scaffold222G42803 Striga asiatica HOM05D006914 ORTHO05D008583 1.5e-22 109.4 74 73.0
vmacro06059 Vaccinium macrocarpon HOM05D000079 ORTHO05D000211 1.5e-22 109.4 74 73.0
CAN.G694.81 Capsicum annuum HOM05D006914 ORTHO05D008583 2.0e-22 109.0 79 70.9
PGSC0003DMG400023462 Solanum tuberosum HOM05D006914 ORTHO05D008583 2.0e-22 109.0 74 77.0
arahy.Tifrunner.gnm1.ann1.6E7PQ4 Arachis hypogaea HOM05D006914 ORTHO05D008583 1.0e-21 106.7 74 73.0
PSO782G4630 Papaver somniferum HOM05D006914 ORTHO05D008583 1.7e-21 105.9 89 59.6
arahy.Tifrunner.gnm1.ann1.S2MTQV Arachis hypogaea HOM05D006914 ORTHO05D008583 2.9e-21 105.1 74 71.6
Pp3c19_17380 Physcomitrium patens HOM05D006914 ORTHO05D008583 3.8e-21 104.8 90 60.0
AagrBONN_evm.TU.Sc2ySwM_362.2477 Anthoceros agrestis HOM05D006914 ORTHO05D008583 4.9e-21 104.4 91 64.8
Mapoly0004s0198 Marchantia polymorpha HOM05D006914 ORTHO05D008583 5.5e-20 100.9 76 67.1
CBR_g51779 Chara braunii HOM05D006914 ORTHO05D008583 9.3e-20 100.1 90 61.1
Gohir.A08G236100 Gossypium hirsutum HOM05D006914 ORTHO05D008583 3.5e-19 98.2 62 77.4
SMO304G0019 Selaginella moellendorffii HOM05D006914 ORTHO05D008583 6.0e-19 97.4 73 67.1
BcaC04g19922 Brassica carinata HOM05D006914 ORTHO05D008583 2.3e-18 95.5 56 89.3
Sc13g0007320 Simmondsia chinensis HOM05D006914 ORTHO05D008583 1.5e-17 92.8 62 75.8
Aa31LG1G14450 Aethionema arabicum HOM05D006914 ORTHO05D008583 3.3e-17 91.7 73 68.5
Pp3c17_5060 Physcomitrium patens HOM05D006914 ORTHO05D008583 6.3e-16 87.4 99 52.5
AagrBONN_evm.TU.Sc2ySwM_228.3148 Anthoceros agrestis HOM05D006914 ORTHO05D008583 3.1e-15 85.1 77 59.7
Cre12.g554750 Chlamydomonas reinhardtii HOM05D006914 ORTHO05D008583 5.3e-15 84.3 85 54.1
Haze_19154 Corylus avellana HOM05D002983 ORTHO05D003451 6.9e-15 84.0 62 72.6
PRCOL_00002080 Prasinoderma coloniale HOM05D006914 ORTHO05D008583 1.8e-10 69.3 83 53.0
SHI02838 Sapria himalayana HOM05D006914 ORTHO05D008583 3.9e-10 68.2 87 44.8
BraA10t43605Z Brassica rapa HOM05D006914 ORTHO05D008583 7.4e-09 63.9 34 94.1
C08p16940 Brassica napus HOM05D006914 ORTHO05D008583 1.7e-08 62.8 36 83.3
BolC9t57826H Brassica oleracea HOM05D006914 ORTHO05D008583 2.4e-07 58.9 30 90.0


User provided reference genes

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