Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G33420 Arabidopsis lyrata HOM05D005586 ORTHO05D007044 0.0e+00 1208.0 643 100.0
AT5G57460 Arabidopsis thaliana HOM05D005586 ORTHO05D007044 0.0e+00 1184.1 647 97.8
CARHR271250 Cardamine hirsuta HOM05D005586 ORTHO05D007044 0.0e+00 1161.4 650 95.7
Carub.0008s1797 Capsella rubella HOM05D005586 ORTHO05D007044 0.0e+00 1135.9 645 94.0
Aa31LG3G13340 Aethionema arabicum HOM05D005586 ORTHO05D007044 0.0e+00 1127.5 643 90.4
BolC3t13940H Brassica oleracea HOM05D005586 ORTHO05D007044 0.0e+00 1122.5 643 93.0
A03p12820 Brassica napus HOM05D005586 ORTHO05D007044 0.0e+00 1119.8 643 93.2
C03p14980 Brassica napus HOM05D005586 ORTHO05D007044 0.0e+00 1119.0 644 92.9
BraA03t10590Z Brassica rapa HOM05D005586 ORTHO05D007044 0.0e+00 1117.4 643 92.8
BcaB01g04458 Brassica carinata HOM05D005586 ORTHO05D007044 0.0e+00 1113.6 645 92.6
BcaC01g06487 Brassica carinata HOM05D005586 ORTHO05D007044 0.0e+00 1112.4 643 92.5
C09p49310 Brassica napus HOM05D005586 ORTHO05D007044 0.0e+00 1112.4 646 91.8
BcaC04g19966 Brassica carinata HOM05D005586 ORTHO05D007044 0.0e+00 1110.5 648 91.5
BcaB08g36100 Brassica carinata HOM05D005586 ORTHO05D007044 0.0e+00 1107.4 645 90.1
Sp6g19170 Schrenkiella parvula HOM05D005586 ORTHO05D007044 0.0e+00 1097.4 645 91.8
Thhalv10015707m.g Eutrema salsugineum HOM05D005586 ORTHO05D007044 0.0e+00 1092.8 643 91.1
BraA10t43568Z Brassica rapa HOM05D005586 ORTHO05D007044 0.0e+00 1092.0 646 88.1
BolC9t57782H Brassica oleracea HOM05D005586 ORTHO05D007044 0.0e+00 1082.8 646 90.2
A10p14890 Brassica napus HOM05D005586 ORTHO05D007044 0.0e+00 1079.3 646 88.1
Aa31LG3G220 Aethionema arabicum HOM05D005586 ORTHO05D007044 8.5e-306 1053.1 646 83.6
THA.LOC104811789 Tarenaya hassleriana HOM05D005586 ORTHO05D007044 1.5e-302 1042.3 646 84.4
COL.COLO4_33680 Corchorus olitorius HOM05D005586 ORTHO05D007044 1.5e-265 919.5 654 73.2
Ca_21173_v3 Cicer arietinum L. HOM05D005586 ORTHO05D007044 3.4e-262 908.3 652 71.6
Ca_21222_v3 Cicer arietinum L. HOM05D005586 ORTHO05D007044 3.4e-262 908.3 652 71.6
Cpa.g.sc95.50 Carica papaya HOM05D005586 ORTHO05D007044 5.8e-262 907.5 630 77.3
TWI60G0698 Tripterygium wilfordii HOM05D005586 ORTHO05D007044 7.5e-262 907.1 657 72.8
Duzib168G0896 Durio zibethinus HOM05D005586 ORTHO05D007044 1.7e-261 906.0 653 72.0
Prupe.2G007900 Prunus persica HOM05D005586 ORTHO05D007044 9.2e-260 900.2 658 72.6
Ciclev10007551m.g Citrus clementina HOM05D005586 ORTHO05D007044 2.7e-259 898.7 652 71.6
Gohir.A08G084500 Gossypium hirsutum HOM05D005586 ORTHO05D007044 1.0e-258 896.7 652 72.7
CANSAT11G2700 Cannabis sativa HOM05D005586 ORTHO05D007044 1.7e-258 896.0 655 70.4
Lj4g0013239 Lotus japonicus HOM05D005586 ORTHO05D007044 6.6e-258 894.0 650 69.7
Atru.chr7.639 Acer truncatum HOM05D005586 ORTHO05D007044 1.5e-257 892.9 660 71.1
Gorai.004G099900 Gossypium raimondii HOM05D005586 ORTHO05D007044 1.5e-257 892.9 652 71.9
Lalb_Chr12g0199381 Lupinus albus HOM05D005586 ORTHO05D007044 1.5e-257 892.9 655 71.6
arahy.Tifrunner.gnm1.ann1.F5X18S Arachis hypogaea HOM05D005586 ORTHO05D007044 3.3e-257 891.7 655 70.7
Medtr4g128210 Medicago truncatula HOM05D005586 ORTHO05D007044 4.3e-257 891.3 653 71.1
MELO3C017465.2 Cucumis melo HOM05D005586 ORTHO05D007044 1.2e-256 889.8 660 70.8
Glyma.17G063500 Glycine max HOM05D005586 ORTHO05D007044 2.1e-256 889.0 651 71.0
Potri.006G168200 Populus trichocarpa HOM05D005586 ORTHO05D007044 6.2e-256 887.5 659 72.2
Psat0s509g0200 Pisum sativum HOM05D005586 ORTHO05D007044 8.0e-256 887.1 655 70.1
ClCG06G013320 Citrullus lanatus HOM05D005586 ORTHO05D007044 1.1e-255 886.7 660 70.6
Glyma.20G083600 Glycine max HOM05D005586 ORTHO05D007044 1.4e-255 886.3 652 71.2
CsaV3_1G031580 Cucumis sativus L. HOM05D005586 ORTHO05D007044 1.5e-254 882.9 661 70.2
Sed0016049 Sechium edule HOM05D005586 ORTHO05D007044 3.4e-254 881.7 660 70.5
Sed0005590 Sechium edule HOM05D005586 ORTHO05D007044 9.8e-254 880.2 658 70.7
Sabra06G0129800 Salix brachista HOM05D005586 ORTHO05D007044 2.2e-253 879.0 659 71.3
RcHm_v2.0_Chr4g0402481 Rosa chinensis HOM05D005586 ORTHO05D007044 1.9e-252 875.9 648 70.8
Phvul.003G146100 Phaseolus vulgaris HOM05D005586 ORTHO05D007044 2.4e-252 875.5 650 70.8
Thecc.09G173100 Theobroma cacao HOM05D005586 ORTHO05D007044 2.1e-251 872.5 632 72.3
FAN18G4074 Fragaria x ananassa HOM05D005586 ORTHO05D007044 2.7e-251 872.1 651 70.5
FvH4_5g27790 Fragaria vesca HOM05D005586 ORTHO05D007044 6.0e-251 870.9 651 70.4
FAN08G2362 Fragaria x ananassa HOM05D005586 ORTHO05D007044 7.8e-251 870.5 651 70.5
CiPaw.07G192200 Carya illinoinensis HOM05D005586 ORTHO05D007044 8.6e-250 867.1 655 71.3
QL02p097708 Quercus lobata HOM05D005586 ORTHO05D007044 1.5e-249 866.3 652 70.4
VMungo1215G0758 Vigna mungo HOM05D005586 ORTHO05D007044 3.3e-249 865.1 636 71.4
Dinv41251 Davidia involucrata HOM05D005586 ORTHO05D007044 1.4e-247 859.8 645 70.2
PGR102G3328 Punica granatum HOM05D005586 ORTHO05D007044 2.3e-247 859.0 653 69.5
Manes.14G153700 Manihot esculenta HOM05D005586 ORTHO05D007044 5.2e-247 857.8 642 71.0
Eucgr.C02307 Eucalyptus grandis HOM05D005586 ORTHO05D007044 1.3e-245 853.2 662 68.0
Lj9P685T24 Lonicera japonica HOM05D005586 ORTHO05D007044 1.3e-245 853.2 653 68.5
Haze_22099 Corylus avellana HOM05D005586 ORTHO05D007044 2.4e-244 849.0 657 68.0
Cfa013507 Carpinus fangiana HOM05D005586 ORTHO05D007044 5.4e-244 847.8 663 67.1
MD13G1254800 Malus domestica HOM05D005586 ORTHO05D007044 1.0e-242 843.6 647 70.2
Aqoxy7G02326 Aquilegia oxysepala HOM05D005586 ORTHO05D007044 3.9e-242 841.6 656 67.8
TPR.G5407 Trifolium pratense HOM05D005586 ORTHO05D007044 6.6e-242 840.9 584 73.6
DCAR_017968 Daucus carota HOM05D005586 ORTHO05D007044 3.3e-241 838.6 649 68.7
CSS0030464 Camellia sinensis var. sinensis HOM05D005586 ORTHO05D007044 9.6e-241 837.0 644 69.6
Dinv25464 Davidia involucrata HOM05D005586 ORTHO05D007044 9.6e-241 837.0 645 69.6
TAR383G0761 Trochodendron aralioides HOM05D005586 ORTHO05D007044 1.1e-239 833.6 657 68.0
TAR626G0800 Trochodendron aralioides HOM05D005586 ORTHO05D007044 4.0e-239 831.6 655 67.3
BcaC01g06491 Brassica carinata HOM05D005586 ORTHO05D007044 1.5e-238 829.7 652 71.8
Cc06_g13260 Coffea canephora HOM05D005586 ORTHO05D007044 2.0e-238 829.3 657 67.4
Rhsim07G0149700 Rhododendron simsii HOM05D005586 ORTHO05D007044 4.4e-238 828.2 646 67.8
MSTRG.6212 Avicennia marina HOM05D005586 ORTHO05D007044 1.3e-237 826.6 654 67.0
Peaxi162Scf00231g00064 Petunia axillaris HOM05D005586 ORTHO05D007044 4.2e-236 821.6 656 66.5
Sc08g0005320 Simmondsia chinensis HOM05D005586 ORTHO05D007044 4.2e-236 821.6 655 67.9
PSO170G6484 Papaver somniferum HOM05D005586 ORTHO05D007044 4.6e-235 818.1 657 66.7
Ah.14g083790 Amaranthus hybridus HOM05D005586 ORTHO05D007044 1.3e-234 816.6 655 67.5
ECA234G4574 Erigeron canadensis HOM05D005586 ORTHO05D007044 1.7e-234 816.2 653 67.2
Gohir.D08G094100 Gossypium hirsutum HOM05D005586 ORTHO05D007044 5.1e-234 814.7 652 67.3
CSS0000496 Camellia sinensis var. sinensis HOM05D005586 ORTHO05D007044 1.5e-233 813.1 644 68.3
PSO063G4043 Papaver somniferum HOM05D005586 ORTHO05D007044 1.3e-232 810.1 657 66.1
Nitab4.5_0000730g0080 Nicotiana tabacum HOM05D005586 ORTHO05D007044 3.6e-232 808.5 658 65.7
PGSC0003DMG400011415 Solanum tuberosum HOM05D005586 ORTHO05D007044 4.8e-232 808.1 654 65.7
Hma1.2p1_1025F.1_g249260 Hydrangea macrophylla HOM05D005586 ORTHO05D007044 6.2e-232 807.7 576 72.9
Oeu025223.1 Olea europaea HOM05D005586 ORTHO05D007044 8.1e-232 807.4 648 65.3
Solyc10g078790.1 Solanum lycopersicum HOM05D005586 ORTHO05D007044 3.1e-231 805.4 654 65.6
Sopen10g029410 Solanum pennellii HOM05D005586 ORTHO05D007044 9.0e-231 803.9 654 65.4
SHI41749 Sapria himalayana HOM05D005586 ORTHO05D007044 1.2e-230 803.5 659 64.8
Nn4g25000 Nelumbo nucifera HOM05D005586 ORTHO05D007044 9.9e-230 800.4 637 67.5
Lj7P472T26 Lonicera japonica HOM05D005586 ORTHO05D007044 1.3e-229 800.0 654 64.8
Oeu009835.1 Olea europaea HOM05D005586 ORTHO05D007044 1.7e-229 799.7 648 64.7
Lsat_1_v5_gn_5_84680 Lactuca sativa HOM05D005586 ORTHO05D007044 3.8e-229 798.5 656 65.2
EL10Ac8g18286 Beta vulgaris HOM05D005586 ORTHO05D007044 1.1e-228 797.0 660 67.9
Migut.J01477 Erythranthe guttata HOM05D005586 ORTHO05D007044 3.2e-228 795.4 654 64.2
SGA_v2.0_scaffold17G07909 Striga asiatica HOM05D005586 ORTHO05D007044 2.3e-226 789.3 646 66.3
CAN.G1161.32 Capsicum annuum HOM05D005586 ORTHO05D007044 5.1e-226 788.1 657 64.7
Nitab4.5_0004134g0010 Nicotiana tabacum HOM05D005586 ORTHO05D007044 6.6e-226 787.7 651 65.1
Nitab4.5_0000455g0040 Nicotiana tabacum HOM05D005586 ORTHO05D007044 2.5e-225 785.8 647 65.2
MBI03_g13495_MAGBIO Magnolia biondii HOM05D005586 ORTHO05D007044 9.6e-225 783.9 658 63.4
GSVIVG01029208001 Vitis vinifera HOM05D005586 ORTHO05D007044 1.2e-222 776.9 647 64.8
CDE04G2484 Ceratophyllum demersum HOM05D005586 ORTHO05D007044 8.4e-213 744.2 652 61.8
MBI14_g17367_MAGBIO Magnolia biondii HOM05D005586 ORTHO05D007044 1.1e-212 743.8 651 60.8
MD13G1254300 Malus domestica HOM05D005586 ORTHO05D007044 1.4e-212 743.4 647 64.6
PSO541G5977 Papaver somniferum HOM05D005586 ORTHO05D007044 1.6e-211 740.0 661 61.9
AUR62021301 Chenopodium quinoa HOM05D005586 ORTHO05D007044 2.5e-209 732.6 655 61.4
AUR62033219 Chenopodium quinoa HOM05D005586 ORTHO05D007044 2.5e-209 732.6 655 61.4
BcaC01g06494 Brassica carinata HOM05D005586 ORTHO05D007044 4.2e-204 715.3 625 69.4
SalBow6G0691 Salvia bowleyana HOM05D005586 ORTHO05D007044 2.6e-198 696.0 647 58.6
ATR0618G120 Amborella trichopoda HOM05D005586 ORTHO05D007044 4.5e-198 695.3 654 57.8
SalBow1G5715 Salvia bowleyana HOM05D005586 ORTHO05D007044 2.2e-197 693.0 654 59.0
SEGI_38070 Sequoiadendron giganteum HOM05D005586 ORTHO05D007044 5.9e-190 668.3 659 56.3
Actinidia15717 Actinidia chinensis HOM05D005586 ORTHO05D007044 2.9e-189 666.0 635 59.5
Os08g0243900 Oryza sativa ssp. japonica HOM05D005586 ORTHO05D007044 5.7e-185 651.7 653 56.2
Actinidia14649 Actinidia chinensis HOM05D005586 ORTHO05D007044 2.2e-184 649.8 550 64.5
Zm00001eb414690 Zea mays HOM05D005586 ORTHO05D007044 3.1e-183 646.0 655 54.7
MBI18_g04576_MAGBIO Magnolia biondii HOM05D005586 ORTHO05D007044 2.9e-181 639.4 644 57.0
Hma1.2p1_3184F.1_g333760 Hydrangea macrophylla HOM05D005586 ORTHO05D007044 1.8e-178 630.2 646 57.4
CDE02G2425 Ceratophyllum demersum HOM05D005586 ORTHO05D007044 3.6e-163 579.3 658 51.1
MBI16_g35931_MAGBIO Magnolia biondii HOM05D005586 ORTHO05D007044 1.4e-151 540.8 554 55.6
Mapoly0111s0055 Marchantia polymorpha HOM05D005586 ORTHO05D007044 1.1e-143 514.6 678 45.6
Pp3c25_4850 Physcomitrium patens HOM05D005586 ORTHO05D007044 8.9e-138 495.0 678 44.0
AagrBONN_evm.TU.Sc2ySwM_368.670 Anthoceros agrestis HOM05D005586 ORTHO05D007044 1.8e-122 444.1 683 42.0
COL.COLO4_04392 Corchorus olitorius HOM05D005586 ORTHO05D007044 3.5e-118 429.9 349 65.0
unitig_899.g14852 Utricularia gibba HOM05D005586 ORTHO05D007044 1.4e-103 381.3 336 64.3
unitig_899.g14851 Utricularia gibba HOM05D005586 ORTHO05D007044 1.1e-92 345.1 243 69.1
SMO228G0090 Selaginella moellendorffii HOM05D005586 ORTHO05D007044 3.8e-88 330.1 392 48.0
HPP92_000781 Vanilla planifolia HOM05D005586 ORTHO05D007044 8.5e-64 249.2 295 51.5
CBR_g26159 Chara braunii HOM05D005586 ORTHO05D000002 5.2e-45 186.8 563 28.4
QL11p053068 Quercus lobata HOM05D005586 ORTHO05D007044 2.9e-40 171.0 113 75.2
MD16G1258000 Malus domestica HOM05D005586 ORTHO05D007044 1.1e-34 152.5 118 66.9
MD16G1258100 Malus domestica HOM05D005586 ORTHO05D007044 3.2e-26 124.4 113 65.5
Oeu013635.1 Olea europaea HOM05D006172 ORTHO05D005515 8.1e-14 83.2 94 51.1
CBR_g26157 Chara braunii HOM05D005586 ORTHO05D007044 1.6e-09 68.9 98 38.8
MBI16_g35933_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D009834 3.0e-08 64.7 44 65.9
MBI16_g35934_MAGBIO Magnolia biondii HOM05D005586 ORTHO05D007044 3.6e-06 57.8 51 56.9


User provided reference genes

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