Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G30770 Arabidopsis lyrata HOM05D006019 ORTHO05D007900 7.3e-306 1053.1 550 100.0
AT5G55220 Arabidopsis thaliana HOM05D006019 ORTHO05D007900 9.2e-293 1009.6 550 95.8
Carub.0008s1557 Capsella rubella HOM05D006019 ORTHO05D007900 3.4e-287 991.1 553 94.9
CARHR268580 Cardamine hirsuta HOM05D006019 ORTHO05D007900 6.6e-283 976.9 550 94.0
Thhalv10013195m.g Eutrema salsugineum HOM05D006019 ORTHO05D007900 7.9e-260 900.2 559 85.3
Sp6g17150 Schrenkiella parvula HOM05D006019 ORTHO05D007900 1.0e-259 899.8 561 86.1
BolC2t07733H Brassica oleracea HOM05D006019 ORTHO05D007900 1.1e-256 889.8 576 83.3
BcaB05g22192 Brassica carinata HOM05D006019 ORTHO05D007900 2.0e-255 885.6 553 84.6
BraA02t06043Z Brassica rapa HOM05D006019 ORTHO05D007900 9.3e-253 876.7 562 83.3
Aa31LG3G11210 Aethionema arabicum HOM05D006019 ORTHO05D007900 6.9e-248 860.5 553 83.0
C02p16310 Brassica napus HOM05D006019 ORTHO05D000403 7.9e-244 847.0 539 84.6
A02p09780 Brassica napus HOM05D006019 ORTHO05D000403 2.8e-241 838.6 538 83.5
BcaC03g14251 Brassica carinata HOM05D006019 ORTHO05D007900 9.7e-234 813.5 564 79.6
THA.LOC104817684 Tarenaya hassleriana HOM05D006019 ORTHO05D007900 1.1e-218 763.5 558 72.0
BcaC03g14252 Brassica carinata HOM05D006019 ORTHO05D007900 4.5e-199 698.4 466 80.7
Duzib213G0195 Durio zibethinus HOM05D006019 ORTHO05D007900 1.0e-195 687.2 552 63.8
CSS0042888 Camellia sinensis var. sinensis HOM05D006019 ORTHO05D007900 1.4e-195 686.8 552 64.5
CSS0000535 Camellia sinensis var. sinensis HOM05D006019 ORTHO05D007900 2.6e-194 682.6 551 63.9
Cpa.g.sc284.5 Carica papaya HOM05D006019 ORTHO05D007900 4.4e-194 681.8 577 62.0
Manes.03G136600 Manihot esculenta HOM05D006019 ORTHO05D007900 4.4e-194 681.8 472 71.4
QL08p020269 Quercus lobata HOM05D006019 ORTHO05D007900 7.5e-194 681.0 550 64.4
Thecc.07G028300 Theobroma cacao HOM05D006019 ORTHO05D007900 7.5e-194 681.0 552 63.0
TAR629G1914 Trochodendron aralioides HOM05D006019 ORTHO05D007900 9.8e-194 680.6 542 64.0
Atru.chr2.3529 Acer truncatum HOM05D006019 ORTHO05D007900 1.7e-193 679.9 558 63.1
Gorai.002G093600 Gossypium raimondii HOM05D006019 ORTHO05D007900 4.9e-193 678.3 552 63.9
Eucgr.F03504 Eucalyptus grandis HOM05D006019 ORTHO05D007900 6.3e-193 677.9 557 62.8
Gohir.A01G084500 Gossypium hirsutum HOM05D006019 ORTHO05D007900 6.3e-193 677.9 555 64.0
Gohir.D01G070900 Gossypium hirsutum HOM05D006019 ORTHO05D007900 8.3e-193 677.6 552 63.9
Peaxi162Scf00235g00727 Petunia axillaris HOM05D006019 ORTHO05D007900 8.3e-193 677.6 494 69.4
Atru.chr2.3549 Acer truncatum HOM05D006019 ORTHO05D007900 1.8e-192 676.4 472 70.8
GSVIVG01037722001 Vitis vinifera HOM05D006019 ORTHO05D007900 4.1e-192 675.2 472 70.1
CANSAT11G1049 Cannabis sativa HOM05D006019 ORTHO05D007900 1.6e-191 673.3 561 62.9
Ciclev10007944m.g Citrus clementina HOM05D006019 ORTHO05D007900 1.0e-190 670.6 475 69.9
COL.COLO4_09733 Corchorus olitorius HOM05D006019 ORTHO05D007900 3.3e-189 665.6 552 61.1
CiPaw.11G172700 Carya illinoinensis HOM05D006019 ORTHO05D007900 5.6e-189 664.8 540 64.6
Potri.015G065900 Populus trichocarpa HOM05D006019 ORTHO05D007900 5.6e-189 664.8 476 69.5
Sabra15G0091100 Salix brachista HOM05D006019 ORTHO05D007900 2.8e-188 662.5 476 69.5
Nn1g07344 Nelumbo nucifera HOM05D006019 ORTHO05D007900 3.6e-188 662.1 467 69.8
vmacro09689 Vaccinium macrocarpon HOM05D006019 ORTHO05D007900 6.1e-188 661.4 485 69.1
VMungo0647G0128 Vigna mungo HOM05D006019 ORTHO05D007900 2.3e-187 659.4 473 69.1
CAN.G337.58 Capsicum annuum HOM05D006019 ORTHO05D007900 5.2e-187 658.3 471 69.9
Phvul.008G272400 Phaseolus vulgaris HOM05D006019 ORTHO05D007900 5.2e-187 658.3 473 68.9
Dinv22232 Davidia involucrata HOM05D006019 ORTHO05D007900 6.8e-187 657.9 533 64.4
Actinidia35369 Actinidia chinensis HOM05D006019 ORTHO05D007900 1.2e-186 657.1 473 68.5
PGR031G3909 Punica granatum HOM05D006019 ORTHO05D007900 2.6e-186 656.0 471 68.4
Nitab4.5_0000984g0040 Nicotiana tabacum HOM05D006019 ORTHO05D007900 4.4e-186 655.2 507 66.1
Lsat_1_v5_gn_9_90660 Lactuca sativa HOM05D006019 ORTHO05D007900 5.8e-186 654.8 550 62.0
Migut.M01708 Erythranthe guttata HOM05D006019 ORTHO05D007900 1.7e-185 653.3 475 67.8
PGSC0003DMG400022300 Solanum tuberosum HOM05D006019 ORTHO05D007900 2.2e-185 652.9 469 69.9
FAN21G2609 Fragaria x ananassa HOM05D006019 ORTHO05D007900 2.9e-185 652.5 476 69.1
Sopen07g033150 Solanum pennellii HOM05D006019 ORTHO05D007900 2.9e-185 652.5 469 69.9
Solyc07g064950.3 Solanum lycopersicum HOM05D006019 ORTHO05D007900 6.4e-185 651.4 470 69.6
Haze_09462 Corylus avellana HOM05D006019 ORTHO05D007900 8.3e-185 651.0 459 70.2
ECA240G2757 Erigeron canadensis HOM05D006019 ORTHO05D007900 8.3e-185 651.0 472 66.1
Glyma.02G294900 Glycine max HOM05D006019 ORTHO05D007900 1.1e-184 650.6 473 68.1
LjContig00272g0018197 Lotus japonicus HOM05D006019 ORTHO05D007900 9.2e-184 647.5 551 61.7
Nitab4.5_0002826g0040 Nicotiana tabacum HOM05D006019 ORTHO05D007900 3.5e-183 645.6 475 68.0
MD11G1209500 Malus domestica HOM05D006019 ORTHO05D007900 1.3e-182 643.7 472 68.2
Oeu026379.1 Olea europaea HOM05D006019 ORTHO05D007900 2.3e-182 642.9 467 67.2
Glyma.14G018700 Glycine max HOM05D006019 ORTHO05D007900 3.0e-182 642.5 558 60.6
HanXRQChr13g0408251 Helianthus annuus HOM05D006019 ORTHO05D007900 6.6e-182 641.3 472 65.7
MELO3C014178.2 Cucumis melo HOM05D006019 ORTHO05D007900 8.6e-182 641.0 559 61.0
Cc05_g14300 Coffea canephora HOM05D006019 ORTHO05D007900 1.1e-181 640.6 473 66.4
ClCG10G005120 Citrullus lanatus HOM05D006019 ORTHO05D007900 1.5e-181 640.2 556 60.8
Lj1C880T10 Lonicera japonica HOM05D006019 ORTHO05D007900 4.3e-181 638.6 533 63.4
CsaV3_3G004800 Cucumis sativus L. HOM05D006019 ORTHO05D007900 7.3e-181 637.9 557 60.5
FAN25G1378 Fragaria x ananassa HOM05D006019 ORTHO05D007900 1.6e-180 636.7 476 68.5
RcHm_v2.0_Chr5g0041541 Rosa chinensis HOM05D006019 ORTHO05D007900 3.6e-180 635.6 471 67.1
Medtr5g093830 Medicago truncatula HOM05D006019 ORTHO05D007900 6.2e-180 634.8 548 60.9
AUR62020342 Chenopodium quinoa HOM05D006019 ORTHO05D007900 8.0e-180 634.4 500 62.6
Prupe.4G223000 Prunus persica HOM05D006019 ORTHO05D007900 4.0e-179 632.1 463 68.3
Lalb_Chr04g0248161 Lupinus albus HOM05D006019 ORTHO05D007900 7.5e-178 627.9 476 65.1
DCAR_017106 Daucus carota HOM05D006019 ORTHO05D007900 2.2e-177 626.3 443 69.1
arahy.Tifrunner.gnm1.ann1.G2L6CM Arachis hypogaea HOM05D006019 ORTHO05D007900 6.4e-177 624.8 461 67.7
TPR.G35353 Trifolium pratense HOM05D006019 ORTHO05D007900 1.9e-176 623.2 550 60.2
Aqoxy1G02863 Aquilegia oxysepala HOM05D006019 ORTHO05D007900 2.0e-175 619.8 471 65.4
Sed0026759 Sechium edule HOM05D006019 ORTHO05D007900 7.8e-175 617.8 477 64.2
Ca_06346_v3 Cicer arietinum L. HOM05D006019 ORTHO05D007900 1.0e-174 617.5 439 69.9
MBI19_g29437_MAGBIO Magnolia biondii HOM05D006019 ORTHO05D007900 1.0e-174 617.5 535 61.5
FvH4_3g23540 Fragaria vesca HOM05D006019 ORTHO05D007900 6.6e-174 614.8 451 68.7
Psat2g009800 Pisum sativum HOM05D006019 ORTHO05D007900 2.8e-172 609.4 550 59.1
EL10Ac4g07692 Beta vulgaris HOM05D006019 ORTHO05D007900 8.1e-172 607.8 500 59.2
TWI39G1205 Tripterygium wilfordii HOM05D006019 ORTHO05D007900 1.4e-171 607.1 475 62.9
HanXRQChr03g0076861 Helianthus annuus HOM05D006019 ORTHO05D007900 1.8e-171 606.7 475 63.6
PSO541G6030 Papaver somniferum HOM05D006019 ORTHO05D007900 5.8e-170 601.7 478 62.6
PSO675G6628 Papaver somniferum HOM05D006019 ORTHO05D007900 6.4e-169 598.2 478 62.1
AUR62015881 Chenopodium quinoa HOM05D006019 ORTHO05D007900 7.3e-165 584.7 484 59.9
arahy.Tifrunner.gnm1.ann1.PR9FWM Arachis hypogaea HOM05D006019 ORTHO05D007900 1.8e-163 580.1 459 63.8
FAN16G2690 Fragaria x ananassa HOM05D006019 ORTHO05D007900 3.1e-163 579.3 476 63.7
Rhsim04G0016400 Rhododendron simsii HOM05D006019 ORTHO05D000403 8.9e-163 577.8 558 57.3
ATR1128G029 Amborella trichopoda HOM05D006019 ORTHO05D007900 9.9e-162 574.3 443 63.2
Hund01957 Selenicereus undatus HOM05D006019 ORTHO05D007900 1.6e-159 567.0 475 61.9
Ah.06g182250 Amaranthus hybridus HOM05D006019 ORTHO05D007900 6.0e-159 565.1 500 57.2
Os06g0308000 Oryza sativa ssp. japonica HOM05D006019 ORTHO05D007900 1.8e-155 553.5 503 57.3
Zm00001eb405570 Zea mays HOM05D006019 ORTHO05D007900 9.9e-154 547.7 521 54.3
SGA_v2.0_scaffold171G38908 Striga asiatica HOM05D006019 ORTHO05D007900 1.5e-141 507.3 489 55.0
unitig_22.g6170 Utricularia gibba HOM05D006019 ORTHO05D007900 1.5e-141 507.3 373 67.8
Sc16g0005740 Simmondsia chinensis HOM05D006019 ORTHO05D007900 1.9e-136 490.3 486 55.6
SalBow8G4839 Salvia bowleyana HOM05D006019 ORTHO05D007900 1.8e-131 473.8 472 53.6
SEGI_28230 Sequoiadendron giganteum HOM05D006019 ORTHO05D007900 2.1e-127 460.3 469 47.1
Pp3c11_10950 Physcomitrium patens HOM05D006019 ORTHO05D007900 3.9e-126 456.1 470 49.1
Pp3c2_30270 Physcomitrium patens HOM05D006019 ORTHO05D007900 2.2e-124 450.3 473 47.4
CDE04G0522 Ceratophyllum demersum HOM05D006019 ORTHO05D007900 5.5e-120 435.6 367 57.8
AagrBONN_evm.TU.Sc2ySwM_228.3732 Anthoceros agrestis HOM05D006019 ORTHO05D007900 2.1e-119 433.7 455 47.3
Mapoly0157s0020 Marchantia polymorpha HOM05D006019 ORTHO05D007900 2.7e-119 433.3 469 46.5
FAN11G0939 Fragaria x ananassa HOM05D006019 ORTHO05D007900 9.1e-115 418.3 311 65.6
CBR_g21850 Chara braunii HOM05D006019 ORTHO05D007900 1.7e-113 414.1 480 45.0
SMO361G0007 Selaginella moellendorffii HOM05D006019 ORTHO05D007900 4.5e-106 389.4 439 42.8
FAN25G3210 Fragaria x ananassa HOM05D006019 ORTHO05D007900 6.3e-100 369.0 307 62.2
A10p12490 Brassica napus HOM05D006019 ORTHO05D007900 2.9e-73 280.4 385 50.1
MCO13G367 Micromonas commoda HOM05D006019 ORTHO05D007900 7.5e-69 265.8 490 31.8
PRCOL_00002693 Prasinoderma coloniale HOM05D006019 ORTHO05D007900 2.6e-61 240.7 424 33.3
VMungo0464G1494 Vigna mungo HOM05D006019 ORTHO05D007900 9.9e-45 185.7 151 60.3
Glyma.14G020800 Glycine max HOM05D006019 ORTHO05D007900 1.3e-39 168.7 137 56.2
Oeu026380.1 Olea europaea HOM05D006019 ORTHO05D007900 1.6e-39 168.3 138 58.0
BolC9t57451H Brassica oleracea HOM05D006019 ORTHO05D007900 6.9e-38 162.9 195 51.8
TAR720G0004 Trochodendron aralioides HOM05D006019 ORTHO05D007900 6.9e-38 162.9 107 76.6
C09p45770 Brassica napus HOM05D006019 ORTHO05D007900 1.9e-35 154.8 220 46.8
Cre01.g001750 Chlamydomonas reinhardtii HOM05D006019 ORTHO05D007900 4.6e-34 150.2 506 24.9
BraA10t43342Z Brassica rapa HOM05D006019 ORTHO05D007900 1.3e-33 148.7 208 45.2
HPP92_015779 Vanilla planifolia HOM05D006019 ORTHO05D007900 8.1e-31 139.4 260 35.4
C09p45760 Brassica napus HOM05D006019 ORTHO05D007900 6.0e-26 123.2 120 63.3
CDE04G2936 Ceratophyllum demersum HOM05D006019 ORTHO05D007900 7.4e-24 116.3 68 83.8
Hma1.2p1_4091F.1_g338270 Hydrangea macrophylla HOM05D006019 ORTHO05D007900 3.7e-23 114.0 114 58.8
Glyma.14G020666 Glycine max HOM05D006019 ORTHO05D007900 3.1e-22 110.9 92 54.3
BcaC04g20257 Brassica carinata HOM05D006019 ORTHO05D007900 3.8e-20 104.0 81 74.1
VMungo0647G0792 Vigna mungo HOM05D006019 ORTHO05D007900 1.1e-19 102.4 109 49.5
BraA02t07229Z Brassica rapa HOM05D011432 ORTHO05D014939 4.5e-13 80.5 40 100.0
Ca_29171_v3 Cicer arietinum L. HOM05D006019 ORTHO05D003051 2.7e-10 71.2 410 21.7
BolC9t57452H Brassica oleracea HOM05D006019 ORTHO05D000049 7.9e-10 69.7 50 70.0
unitig_22.g6169 Utricularia gibba HOM05D006019 ORTHO05D007900 3.7e-07 60.8 66 50.0


User provided reference genes

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