Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G29790 Arabidopsis lyrata HOM05D004029 ORTHO05D004613 0.0e+00 2065.4 1032 100.0
AT5G54440 Arabidopsis thaliana HOM05D004029 ORTHO05D004613 0.0e+00 2031.1 1032 97.9
Carub.0008s1474 Capsella rubella HOM05D004029 ORTHO05D004613 0.0e+00 2023.4 1032 97.4
CARHR267710 Cardamine hirsuta HOM05D004029 ORTHO05D004613 0.0e+00 1988.0 1032 96.2
Thhalv10012467m.g Eutrema salsugineum HOM05D004029 ORTHO05D004613 0.0e+00 1970.7 1034 95.2
Sp6g16420 Schrenkiella parvula HOM05D004029 ORTHO05D004613 0.0e+00 1952.2 1031 94.7
C02p17030 Brassica napus HOM05D004029 ORTHO05D004613 0.0e+00 1936.0 1034 93.4
BcaC03g14313 Brassica carinata HOM05D004029 ORTHO05D004613 0.0e+00 1933.7 1033 93.4
A02p10290 Brassica napus HOM05D004029 ORTHO05D004613 0.0e+00 1933.7 1033 93.2
BcaB05g22133 Brassica carinata HOM05D004029 ORTHO05D004613 0.0e+00 1931.0 1033 93.0
BcaC04g20340 Brassica carinata HOM05D004029 ORTHO05D004613 0.0e+00 1927.5 1032 92.8
BraA02t06097Z Brassica rapa HOM05D004029 ORTHO05D004613 0.0e+00 1927.1 1039 92.7
BolC2t07800H Brassica oleracea HOM05D004029 ORTHO05D004613 0.0e+00 1925.2 1034 93.1
BolC9t57346H Brassica oleracea HOM05D004029 ORTHO05D004613 0.0e+00 1922.9 1033 92.7
BraA10t43261Z Brassica rapa HOM05D004029 ORTHO05D004613 0.0e+00 1921.7 1035 92.9
A10p11660 Brassica napus HOM05D004029 ORTHO05D004613 0.0e+00 1921.0 1033 92.9
BcaB08g35795 Brassica carinata HOM05D004029 ORTHO05D004613 0.0e+00 1917.1 1031 92.3
C09p44730 Brassica napus HOM05D004029 ORTHO05D004613 0.0e+00 1911.7 1033 92.4
Aa31LG3G10350 Aethionema arabicum HOM05D004029 ORTHO05D004613 0.0e+00 1905.2 1034 91.9
THA.LOC104811852 Tarenaya hassleriana HOM05D004029 ORTHO05D004613 0.0e+00 1753.8 1033 84.3
CSS0001233 Camellia sinensis var. sinensis HOM05D004029 ORTHO05D004613 0.0e+00 1583.2 1030 75.7
COL.COLO4_03559 Corchorus olitorius HOM05D004029 ORTHO05D004613 0.0e+00 1582.0 1030 76.1
Duzib268G1628 Durio zibethinus HOM05D004029 ORTHO05D004613 0.0e+00 1581.2 1038 75.4
CSS0038840 Camellia sinensis var. sinensis HOM05D004029 ORTHO05D004613 0.0e+00 1580.8 1030 75.7
Manes.03G114700 Manihot esculenta HOM05D004029 ORTHO05D004613 0.0e+00 1561.2 1033 75.0
Cfa020529 Carpinus fangiana HOM05D004029 ORTHO05D004613 0.0e+00 1560.0 1035 74.6
Potri.011G123900 Populus trichocarpa HOM05D004029 ORTHO05D004613 0.0e+00 1558.9 1031 75.0
CiPaw.11G174500 Carya illinoinensis HOM05D004029 ORTHO05D004613 0.0e+00 1558.5 1031 74.7
GSVIVG01014409001 Vitis vinifera HOM05D004029 ORTHO05D004613 0.0e+00 1556.2 1037 74.4
Thecc.07G074600 Theobroma cacao HOM05D004029 ORTHO05D004613 0.0e+00 1554.3 1031 75.1
Prupe.4G187500 Prunus persica HOM05D004029 ORTHO05D004613 0.0e+00 1548.9 1038 74.6
Nn1g03970 Nelumbo nucifera HOM05D004029 ORTHO05D004613 0.0e+00 1545.4 1032 74.1
TWI38G0763 Tripterygium wilfordii HOM05D004029 ORTHO05D004613 0.0e+00 1545.4 1031 74.8
Atru.chr2.2811 Acer truncatum HOM05D004029 ORTHO05D004613 0.0e+00 1545.0 1032 74.8
MD11G1239600 Malus domestica HOM05D004029 ORTHO05D004613 0.0e+00 1543.9 1032 74.4
Gohir.D01G054200 Gossypium hirsutum HOM05D004029 ORTHO05D004613 0.0e+00 1543.5 1030 74.6
Actinidia05171 Actinidia chinensis HOM05D004029 ORTHO05D004613 0.0e+00 1539.2 1029 73.9
Gorai.002G074000 Gossypium raimondii HOM05D004029 ORTHO05D004613 0.0e+00 1538.9 1030 74.4
Rhsim06G0193700 Rhododendron simsii HOM05D004029 ORTHO05D004613 0.0e+00 1535.4 1042 72.5
Duzib213G0443 Durio zibethinus HOM05D004029 ORTHO05D004613 0.0e+00 1533.5 1038 73.7
Sabra11G0109200 Salix brachista HOM05D004029 ORTHO05D004613 0.0e+00 1531.2 1072 72.0
Haze_09504 Corylus avellana HOM05D004029 ORTHO05D004613 0.0e+00 1528.5 1035 73.4
Eucgr.F03341 Eucalyptus grandis HOM05D004029 ORTHO05D004613 0.0e+00 1527.7 1032 73.2
FAN21G1497 Fragaria x ananassa HOM05D004029 ORTHO05D004613 0.0e+00 1526.9 1030 73.6
RcHm_v2.0_Chr5g0034971 Rosa chinensis HOM05D004029 ORTHO05D004613 0.0e+00 1524.2 1046 73.3
MD03G1222200 Malus domestica HOM05D004029 ORTHO05D004613 0.0e+00 1522.3 1032 73.5
Glyma.13G280700 Glycine max HOM05D004029 ORTHO05D004613 0.0e+00 1519.6 1037 73.9
Lj3g0020332 Lotus japonicus HOM05D004029 ORTHO05D004613 0.0e+00 1518.1 1034 73.3
CANSAT11G2434 Cannabis sativa HOM05D004029 ORTHO05D004613 0.0e+00 1517.7 1031 74.3
Phvul.005G085200 Phaseolus vulgaris HOM05D004029 ORTHO05D004613 0.0e+00 1515.0 1032 73.6
CsaV3_3G044490 Cucumis sativus L. HOM05D004029 ORTHO05D004613 0.0e+00 1514.2 1033 72.8
PGR031G0420 Punica granatum HOM05D004029 ORTHO05D004613 0.0e+00 1511.1 1032 72.6
Ca_01815_v3 Cicer arietinum L. HOM05D004029 ORTHO05D004613 0.0e+00 1510.4 1033 72.9
Medtr2g080050 Medicago truncatula HOM05D004029 ORTHO05D004613 0.0e+00 1509.6 1033 72.9
FvH4_3g20750 Fragaria vesca HOM05D004029 ORTHO05D004613 0.0e+00 1506.9 1030 72.7
FAN16G1973 Fragaria x ananassa HOM05D004029 ORTHO05D004613 0.0e+00 1506.9 1030 72.6
VMungo1080G0798 Vigna mungo HOM05D004029 ORTHO05D004613 0.0e+00 1506.9 1034 72.7
FAN11G1114 Fragaria x ananassa HOM05D004029 ORTHO05D004613 0.0e+00 1503.8 1030 72.6
arahy.Tifrunner.gnm1.ann1.3J4V9H Arachis hypogaea HOM05D004029 ORTHO05D004613 0.0e+00 1500.0 1031 72.5
FAN25G1694 Fragaria x ananassa HOM05D004029 ORTHO05D004613 0.0e+00 1497.6 1030 72.6
arahy.Tifrunner.gnm1.ann1.IWX37I Arachis hypogaea HOM05D004029 ORTHO05D004613 0.0e+00 1493.8 1044 71.9
vmacro11822 Vaccinium macrocarpon HOM05D004029 ORTHO05D004613 0.0e+00 1489.9 1074 69.4
ClCG11G018320 Citrullus lanatus HOM05D004029 ORTHO05D004613 0.0e+00 1488.8 1102 68.3
AUR62015624 Chenopodium quinoa HOM05D004029 ORTHO05D004613 0.0e+00 1487.2 1033 71.5
Sc03g0009690 Simmondsia chinensis HOM05D004029 ORTHO05D004613 0.0e+00 1485.7 1060 69.9
Ah.06g183680 Amaranthus hybridus HOM05D004029 ORTHO05D004613 0.0e+00 1483.8 1030 71.0
Lalb_Chr25g0286611 Lupinus albus HOM05D004029 ORTHO05D004613 0.0e+00 1483.8 1036 71.6
Psat5g246120 Pisum sativum HOM05D004029 ORTHO05D004613 0.0e+00 1483.0 1050 71.0
Aqoxy7G04099 Aquilegia oxysepala HOM05D004029 ORTHO05D004613 0.0e+00 1480.3 1031 71.8
AUR62029337 Chenopodium quinoa HOM05D004029 ORTHO05D004613 0.0e+00 1479.9 1030 71.1
PSO675G2841 Papaver somniferum HOM05D004029 ORTHO05D004613 0.0e+00 1474.1 1033 70.9
Ciclev10007273m.g Citrus clementina HOM05D004029 ORTHO05D004613 0.0e+00 1473.4 1007 72.9
PSO541G4143 Papaver somniferum HOM05D004029 ORTHO05D004613 0.0e+00 1470.7 1033 70.8
MSTRG.12924 Avicennia marina HOM05D004029 ORTHO05D004613 0.0e+00 1470.3 1034 71.2
Migut.H01912 Erythranthe guttata HOM05D004029 ORTHO05D004613 0.0e+00 1459.9 1046 70.2
Peaxi162Scf01111g00112 Petunia axillaris HOM05D004029 ORTHO05D004613 0.0e+00 1458.4 1033 71.2
Oeu008022.1 Olea europaea HOM05D004029 ORTHO05D004613 0.0e+00 1458.0 1034 70.8
HanXRQChr10g0289491 Helianthus annuus HOM05D004029 ORTHO05D004613 0.0e+00 1457.6 1033 70.4
Hund02202 Selenicereus undatus HOM05D004029 ORTHO05D004613 0.0e+00 1456.4 1017 71.7
Solyc07g063440.3 Solanum lycopersicum HOM05D004029 ORTHO05D004613 0.0e+00 1456.4 1032 70.4
Sopen07g031610 Solanum pennellii HOM05D004029 ORTHO05D004613 0.0e+00 1456.4 1032 70.4
EL10Ac4g08092 Beta vulgaris HOM05D004029 ORTHO05D004613 0.0e+00 1453.3 1031 69.8
Lalb_Chr01g0016971 Lupinus albus HOM05D004029 ORTHO05D004613 0.0e+00 1451.4 1031 70.6
QL08p019114 Quercus lobata HOM05D004029 ORTHO05D004613 0.0e+00 1451.0 1290 59.7
ATR0064G128 Amborella trichopoda HOM05D004029 ORTHO05D004613 0.0e+00 1450.6 1041 69.6
Ca_30535_v3 Cicer arietinum L. HOM05D004029 ORTHO05D004613 0.0e+00 1449.1 1033 71.1
Gohir.A11G282734 Gossypium hirsutum HOM05D004029 ORTHO05D004613 0.0e+00 1443.7 1041 69.6
CAN.G162.91 Capsicum annuum HOM05D004029 ORTHO05D004613 0.0e+00 1443.3 1034 69.6
DCAR_013079 Daucus carota HOM05D004029 ORTHO05D004613 0.0e+00 1435.2 1039 69.0
ECA240G1154 Erigeron canadensis HOM05D004029 ORTHO05D004613 0.0e+00 1421.4 1019 70.2
SGA_v2.0_scaffold77G25216 Striga asiatica HOM05D004029 ORTHO05D004613 0.0e+00 1404.4 1036 68.4
Gohir.D11G296200 Gossypium hirsutum HOM05D004029 ORTHO05D004613 0.0e+00 1389.8 1015 68.4
TAR627G0860 Trochodendron aralioides HOM05D004029 ORTHO05D004613 0.0e+00 1382.5 925 73.9
Lsat_1_v5_gn_9_95861 Lactuca sativa HOM05D004029 ORTHO05D004613 0.0e+00 1375.1 1017 68.6
Lj1C850G7 Lonicera japonica HOM05D004029 ORTHO05D004613 0.0e+00 1363.6 1047 67.5
Sed0019496 Sechium edule HOM05D004029 ORTHO05D004613 0.0e+00 1340.9 937 71.4
Lsat_1_v5_gn_7_105721 Lactuca sativa HOM05D004029 ORTHO05D004613 0.0e+00 1336.2 1034 65.5
Os12g0554400 Oryza sativa ssp. japonica HOM05D004029 ORTHO05D004613 0.0e+00 1317.0 1032 63.9
ECA236G3046 Erigeron canadensis HOM05D004029 ORTHO05D004613 0.0e+00 1273.1 1025 62.4
HanXRQChr13g0386411 Helianthus annuus HOM05D004029 ORTHO05D004613 0.0e+00 1214.1 1037 59.5
Gorai.007G319300 Gossypium raimondii HOM05D004029 ORTHO05D004613 0.0e+00 1211.1 846 71.4
Nitab4.5_0001204g0130 Nicotiana tabacum HOM05D004029 ORTHO05D004613 0.0e+00 1187.6 838 72.2
Glyma.12G220900 Glycine max HOM05D004029 ORTHO05D004613 0.0e+00 1161.7 779 75.5
MELO3C018224.2 Cucumis melo HOM05D004029 ORTHO05D004613 0.0e+00 1108.6 775 70.8
Nitab4.5_0000815g0060 Nicotiana tabacum HOM05D004029 ORTHO05D004613 0.0e+00 1078.5 887 64.4
CDE05G1182 Ceratophyllum demersum HOM05D004029 ORTHO05D004613 4.1e-302 1041.6 865 61.4
Cpa.g.sc80.100 Carica papaya HOM05D004029 ORTHO05D004613 7.5e-288 994.2 1013 54.5
Gohir.A01G067000 Gossypium hirsutum HOM05D004029 ORTHO05D004613 2.1e-282 976.1 628 77.7
Mapoly0031s0138 Marchantia polymorpha HOM05D004029 ORTHO05D004613 3.4e-280 968.8 1165 46.7
unitig_0.g2259 Utricularia gibba HOM05D004029 ORTHO05D004613 1.3e-268 930.2 915 55.6
Pp3c26_12060 Physcomitrium patens HOM05D004029 ORTHO05D004613 2.9e-263 912.5 1140 45.6
Dinv08327 Davidia involucrata HOM05D004029 ORTHO05D004613 2.9e-239 832.8 551 75.9
AagrBONN_evm.TU.Sc2ySwM_344.2130 Anthoceros agrestis HOM05D004029 ORTHO05D004613 1.3e-210 737.6 937 44.5
CBR_g48014 Chara braunii HOM05D004029 ORTHO05D004613 3.0e-204 716.5 1427 33.7
Zm00001eb137170 Zea mays HOM05D004029 ORTHO05D004613 3.0e-204 716.5 519 68.0
Dinv08328 Davidia involucrata HOM05D004029 ORTHO05D004613 3.4e-171 606.7 453 66.9
Psat4g074000 Pisum sativum HOM05D004029 ORTHO05D004613 2.0e-163 580.9 686 48.7
SEGI_15865 Sequoiadendron giganteum HOM05D004029 ORTHO05D004613 1.7e-159 567.8 488 60.2
Gohir.1Z049674 Gossypium hirsutum HOM05D004029 ORTHO05D004613 2.4e-129 467.6 311 73.6
Thhalv10015732m.g Eutrema salsugineum HOM05D004029 ORTHO05D004613 5.1e-95 353.6 189 92.1
Psat3g119680 Pisum sativum HOM05D004029 ORTHO05D004613 2.2e-93 348.2 217 77.4
SEGI_37124 Sequoiadendron giganteum HOM05D004029 ORTHO05D004613 4.7e-88 330.5 320 58.4
SMO115G0239 Selaginella moellendorffii HOM05D004029 ORTHO05D004613 8.5e-82 309.7 260 59.2
Psat1g176800 Pisum sativum HOM05D004029 ORTHO05D004613 4.1e-76 290.8 203 73.4
Psat1g176880 Pisum sativum HOM05D004029 ORTHO05D004613 3.8e-74 284.3 199 72.9
SEGI_39917 Sequoiadendron giganteum HOM05D004029 ORTHO05D004613 1.7e-69 268.9 263 54.4
Lsat_1_v5_gn_3_80381 Lactuca sativa HOM05D004029 ORTHO05D004613 6.3e-69 266.9 261 55.6
Lsat_1_v5_gn_4_112941 Lactuca sativa HOM05D004029 ORTHO05D004613 6.3e-69 266.9 261 55.6
Lsat_1_v5_gn_7_74701 Lactuca sativa HOM05D004029 ORTHO05D004613 6.3e-69 266.9 261 55.6
HPP92_020356 Vanilla planifolia HOM05D004029 ORTHO05D004613 1.7e-66 258.8 451 36.1
Sed0014205 Sechium edule HOM05D004029 ORTHO05D004613 1.2e-62 246.1 189 64.0
Gohir.1Z049574 Gossypium hirsutum HOM05D004029 ORTHO05D004613 5.4e-60 237.3 147 79.6
Actinidia39414 Actinidia chinensis HOM05D004029 ORTHO05D004613 4.5e-59 234.2 152 73.0
ATR0693G140 Amborella trichopoda HOM05D004029 ORTHO05D004613 2.7e-51 208.4 138 71.7
ATR0693G350 Amborella trichopoda HOM05D004029 ORTHO05D004613 3.0e-50 204.9 147 69.4
Gohir.A11G282591 Gossypium hirsutum HOM05D004029 ORTHO05D004613 2.6e-46 191.8 133 65.4
Lsat_1_v5_gn_8_16361 Lactuca sativa HOM05D004029 ORTHO05D004613 3.5e-43 181.4 132 66.7
GSVIVG01015766001 Vitis vinifera HOM05D004029 ORTHO05D004613 1.3e-42 179.5 108 76.9
GSVIVG01016530001 Vitis vinifera HOM05D004029 ORTHO05D004613 1.9e-41 175.6 108 76.9
GSVIVG01005601001 Vitis vinifera HOM05D004029 ORTHO05D004613 4.7e-40 171.0 108 75.0
GSVIVG01006099001 Vitis vinifera HOM05D004029 ORTHO05D004613 4.7e-40 171.0 108 75.0
Solyc07g063450.3 Solanum lycopersicum HOM05D000461 ORTHO05D001829 1.1e-39 169.9 149 55.7
HPP92_020357 Vanilla planifolia HOM05D004029 ORTHO05D004613 3.1e-39 168.3 121 71.1
GSVIVG01030797001 Vitis vinifera HOM05D004029 ORTHO05D004613 2.0e-38 165.6 107 73.8
HPP92_027773 Vanilla planifolia HOM05D004029 ORTHO05D004613 1.1e-31 143.3 90 82.2
SHI21494 Sapria himalayana HOM05D004029 ORTHO05D004613 2.4e-31 142.1 106 64.2
TAR627G0431 Trochodendron aralioides HOM05D004029 ORTHO05D004613 1.3e-29 136.3 73 86.3
Haze_01245 Corylus avellana HOM05D007775 ORTHO05D009858 1.0e-26 126.7 135 51.1
Lsat_1_v5_gn_8_16381 Lactuca sativa HOM05D004029 ORTHO05D004613 3.1e-23 115.2 87 64.4
Pp3c3_4080 Physcomitrium patens HOM05D004029 ORTHO05D004613 2.0e-22 112.5 164 40.2
Atru.chr2.2808 Acer truncatum HOM05D004029 ORTHO05D004613 8.4e-21 107.1 63 79.4
Lsat_1_v5_gn_6_53560 Lactuca sativa HOM05D004029 ORTHO05D004613 1.1e-20 106.7 116 52.6
Psat0ss25761g0120 Pisum sativum HOM05D000735 ORTHO05D004613 1.3e-16 93.2 75 64.0
Dinv22372 Davidia involucrata HOM05D004029 ORTHO05D004613 6.9e-15 87.4 61 68.9
MD16G1231300 Malus domestica HOM05D004029 ORTHO05D004613 6.9e-15 87.4 57 68.4
HPP92_020358 Vanilla planifolia HOM05D004029 ORTHO05D004613 2.0e-14 85.9 52 69.2
CSS0007909 Camellia sinensis var. sinensis HOM05D001136 ORTHO05D004613 5.4e-12 77.8 45 84.4
Pp3c3_4110 Physcomitrium patens HOM05D004029 ORTHO05D004613 1.8e-10 72.8 69 47.8
ATR0693G070 Amborella trichopoda HOM05D004029 ORTHO05D004613 9.0e-07 60.5 46 67.4
Lsat_1_v5_gn_4_161921 Lactuca sativa HOM05D004029 ORTHO05D004613 9.0e-07 60.5 100 38.0
Cre01.g003500 Chlamydomonas reinhardtii HOM05D004029 ORTHO05D004613 5.8e-06 57.8 92 34.8


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