Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G29350 Arabidopsis lyrata HOM05D009534 ORTHO05D011691 1.8e-116 422.5 209 100.0
AL8G19950 Arabidopsis lyrata HOM05D009534 ORTHO05D011691 7.5e-78 294.3 209 69.4
AL3G42090 Arabidopsis lyrata HOM05D009534 ORTHO05D011691 2.8e-77 292.4 209 69.4
AL6G40200 Arabidopsis lyrata HOM05D009534 ORTHO05D011691 2.9e-74 282.3 201 69.2
AL89U10020 Arabidopsis lyrata HOM05D009534 ORTHO05D011691 2.8e-72 275.8 199 66.3
Carub.0005s0343 Capsella rubella HOM05D009534 ORTHO05D011691 1.8e-39 166.8 209 42.1
AL3G44900 Arabidopsis lyrata HOM05D009534 ORTHO05D011691 4.4e-38 162.2 203 41.4
AL4G17620 Arabidopsis lyrata HOM05D009534 ORTHO05D011691 7.6e-38 161.4 209 38.8
AL4G18080 Arabidopsis lyrata HOM05D009534 ORTHO05D011691 8.4e-37 157.9 212 42.0
AL5G20680 Arabidopsis lyrata HOM05D009534 ORTHO05D011691 8.7e-34 147.9 209 40.2
Carub.0025s0006 Capsella rubella HOM05D009534 ORTHO05D011691 5.8e-30 135.2 195 38.5
AL3G44720 Arabidopsis lyrata HOM05D009534 ORTHO05D011691 9.3e-28 127.9 209 32.1
AL6G37460 Arabidopsis lyrata HOM05D009534 ORTHO05D011691 1.6e-27 127.1 210 35.2
AL4G20200 Arabidopsis lyrata HOM05D009534 ORTHO05D011691 4.6e-27 125.6 194 34.0
AL4G30830 Arabidopsis lyrata HOM05D009534 ORTHO05D011691 3.0e-26 122.9 210 33.8
AL4G20220 Arabidopsis lyrata HOM05D009534 ORTHO05D011691 2.8e-24 116.3 121 44.6
AL6G42170 Arabidopsis lyrata HOM05D009534 ORTHO05D011691 1.8e-23 113.6 172 33.7
AL1G53800 Arabidopsis lyrata HOM05D009534 ORTHO05D011691 3.1e-23 112.8 122 45.9
AL3G45330 Arabidopsis lyrata HOM05D009534 ORTHO05D011691 1.7e-21 107.1 202 30.2
AL4G18640 Arabidopsis lyrata HOM05D009534 ORTHO05D011691 3.5e-19 99.4 190 30.5
AL5G19210 Arabidopsis lyrata HOM05D009534 ORTHO05D011691 1.1e-17 94.4 86 48.8
AL4G19880 Arabidopsis lyrata HOM05D009534 ORTHO05D011691 1.6e-16 90.5 191 29.3
AL9U11170 Arabidopsis lyrata HOM05D000675 ORTHO05D000395 1.6e-16 90.5 194 28.4
AL4G30840 Arabidopsis lyrata HOM05D000675 ORTHO05D000395 1.0e-13 81.3 173 28.3
AL6G37470 Arabidopsis lyrata HOM05D009534 ORTHO05D011691 8.4e-13 78.2 125 32.8
AT5G30520 Arabidopsis thaliana HOM05D009534 ORTHO05D011691 1.9e-12 77.0 140 33.6
Carub.0002s0939 Capsella rubella HOM05D025401 ORTHO05D011691 8.7e-10 68.2 99 36.4
C09p21160 Brassica napus HOM05D001224 ORTHO05D003542 1.5e-09 67.4 175 27.4
BolC9t55018H Brassica oleracea HOM05D001224 ORTHO05D003542 1.5e-09 67.4 175 27.4
AL1G59920 Arabidopsis lyrata HOM05D025401 ORTHO05D026774 3.3e-09 66.2 90 41.1
C09p16570 Brassica napus HOM05D001224 ORTHO05D003542 5.7e-09 65.5 175 27.4
AL7G45040 Arabidopsis lyrata HOM05D009534 ORTHO05D011691 1.3e-08 64.3 87 31.0
A10p08840 Brassica napus HOM05D001224 ORTHO05D003542 3.7e-08 62.8 177 26.0
CARHR116560 Cardamine hirsuta HOM05D009534 ORTHO05D011691 1.4e-07 60.8 121 28.9
BolC6t36240H Brassica oleracea HOM05D001224 ORTHO05D003542 1.8e-07 60.5 135 28.1
BraSC37t46117Z Brassica rapa HOM05D001224 ORTHO05D003542 6.9e-07 58.5 135 28.9
BcaC05g25873 Brassica carinata HOM05D001224 ORTHO05D003542 1.2e-06 57.8 158 27.2
C04p09860 Brassica napus HOM05D001224 ORTHO05D003542 3.4e-06 56.2 100 35.0
BolC4t22594H Brassica oleracea HOM05D001224 ORTHO05D003542 3.4e-06 56.2 100 35.0


User provided reference genes

Program Settings