Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G29200 Arabidopsis lyrata HOM05D006017 ORTHO05D007821 1.7e-284 981.9 462 100.0
AT5G54080 Arabidopsis thaliana HOM05D006017 ORTHO05D007821 3.9e-276 954.1 462 96.5
Carub.0008s1436 Capsella rubella HOM05D006017 ORTHO05D007821 2.5e-275 951.4 459 96.1
CARHR267270 Cardamine hirsuta HOM05D006017 ORTHO05D007821 6.4e-271 936.8 459 95.4
Sp6g16110 Schrenkiella parvula HOM05D006017 ORTHO05D007821 9.5e-267 922.9 457 93.7
C02p17670 Brassica napus HOM05D006017 ORTHO05D007821 2.8e-266 921.4 457 93.0
BcaB05g22107 Brassica carinata HOM05D006017 ORTHO05D007821 3.6e-266 921.0 457 93.7
Aa31LG3G9950 Aethionema arabicum HOM05D006017 ORTHO05D007821 8.9e-265 916.4 455 92.7
BcaC03g14354 Brassica carinata HOM05D006017 ORTHO05D007821 3.4e-264 914.4 457 92.6
BolC2t07897H Brassica oleracea HOM05D006017 ORTHO05D007821 7.5e-264 913.3 457 92.3
A02p10590 Brassica napus HOM05D006017 ORTHO05D007821 2.4e-262 908.3 450 92.9
BraA02t06124Z Brassica rapa HOM05D006017 ORTHO05D007821 2.4e-262 908.3 450 92.9
THA.LOC104811882 Tarenaya hassleriana HOM05D006017 ORTHO05D007821 5.8e-248 860.5 441 88.9
Cpa.g.sc131.80 Carica papaya HOM05D006017 ORTHO05D007821 1.7e-236 822.4 431 86.5
Sopen12g005880 Solanum pennellii HOM05D006017 ORTHO05D007821 2.8e-234 815.1 448 81.9
PGSC0003DMG400015330 Solanum tuberosum HOM05D006017 ORTHO05D007821 1.4e-233 812.8 448 81.9
Solyc12g014100.2 Solanum lycopersicum HOM05D006017 ORTHO05D007821 3.1e-233 811.6 448 81.5
TWI38G0439 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 6.9e-233 810.4 454 80.8
Hma1.2p1_0416F.1_g148570 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 1.2e-232 809.7 452 81.9
Thecc.07G102400 Theobroma cacao HOM05D006017 ORTHO05D007821 2.9e-231 805.1 433 85.2
Atru.chr2.2344 Acer truncatum HOM05D006017 ORTHO05D007821 3.8e-231 804.7 454 81.7
Rhsim04G0023700 Rhododendron simsii HOM05D006017 ORTHO05D007821 3.8e-231 804.7 433 84.5
Gorai.002G065000 Gossypium raimondii HOM05D006017 ORTHO05D007821 1.1e-230 803.1 450 81.8
Gohir.D01G045400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 1.4e-230 802.7 450 81.6
ClCG07G009900 Citrullus lanatus HOM05D006017 ORTHO05D007821 1.9e-230 802.4 451 81.8
Manes.03G103900 Manihot esculenta HOM05D006017 ORTHO05D007821 4.2e-230 801.2 443 82.6
Gohir.A01G059400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 5.4e-230 800.8 450 81.8
Dinv14956 Davidia involucrata HOM05D006017 ORTHO05D007821 1.2e-229 799.7 445 82.0
vmacro09508 Vaccinium macrocarpon HOM05D006017 ORTHO05D007821 1.6e-229 799.3 461 79.4
Cfa019614 Carpinus fangiana HOM05D006017 ORTHO05D007821 2.7e-229 798.5 432 84.0
Peaxi162Scf00000g00262 Petunia axillaris HOM05D006017 ORTHO05D007821 2.7e-229 798.5 438 82.9
Prupe.4G172100 Prunus persica HOM05D006017 ORTHO05D007821 3.5e-229 798.1 441 81.4
MSTRG.14945 Avicennia marina HOM05D006017 ORTHO05D007821 7.9e-229 797.0 432 82.9
CiPaw.12G115700 Carya illinoinensis HOM05D006017 ORTHO05D007821 1.3e-228 796.2 441 81.9
CSS0036883 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 2.3e-228 795.4 432 82.9
RcHm_v2.0_Chr5g0031821 Rosa chinensis HOM05D006017 ORTHO05D007821 2.3e-228 795.4 432 82.2
Cc05_g11510 Coffea canephora HOM05D006017 ORTHO05D007821 5.1e-228 794.3 450 80.9
FAN11G3087 Fragaria x ananassa HOM05D006017 ORTHO05D007821 5.1e-228 794.3 444 80.6
FAN16G2700 Fragaria x ananassa HOM05D006017 ORTHO05D007821 6.7e-228 793.9 446 80.0
CANSAT35G1773 Cannabis sativa HOM05D006017 ORTHO05D007821 1.9e-227 792.3 435 83.2
Actinidia18784 Actinidia chinensis HOM05D006017 ORTHO05D007821 2.5e-227 792.0 437 82.4
CsaV3_4G008430 Cucumis sativus L. HOM05D006017 ORTHO05D007821 2.5e-227 792.0 451 80.3
DCAR_028453 Daucus carota HOM05D006017 ORTHO05D007821 2.5e-227 792.0 458 78.4
Sc03g0010290 Simmondsia chinensis HOM05D006017 ORTHO05D007821 7.4e-227 790.4 447 80.8
MELO3C016089.2 Cucumis melo HOM05D006017 ORTHO05D007821 9.6e-227 790.0 440 82.0
PGR083G0123 Punica granatum HOM05D006017 ORTHO05D007821 9.6e-227 790.0 453 81.5
PSO541G6385 Papaver somniferum HOM05D006017 ORTHO05D007821 1.6e-226 789.3 446 80.5
Sed0020976 Sechium edule HOM05D006017 ORTHO05D007821 1.6e-226 789.3 452 80.5
Lj8A152T86 Lonicera japonica HOM05D006017 ORTHO05D007821 2.1e-226 788.9 432 83.3
EL10Ac4g08290 Beta vulgaris HOM05D006017 ORTHO05D007821 3.7e-226 788.1 442 81.2
Lsat_1_v5_gn_9_98620 Lactuca sativa HOM05D006017 ORTHO05D007821 3.7e-226 788.1 432 81.7
Haze_09368 Corylus avellana HOM05D006017 ORTHO05D007821 4.8e-226 787.7 461 79.4
Eucgr.F01184 Eucalyptus grandis HOM05D006017 ORTHO05D007821 4.8e-226 787.7 430 83.3
Eucgr.F01185 Eucalyptus grandis HOM05D006017 ORTHO05D007821 1.1e-225 786.6 430 83.0
MBI07_g06432_MAGBIO Magnolia biondii HOM05D006017 ORTHO05D007821 3.1e-225 785.0 440 79.8
ECA240G4517 Erigeron canadensis HOM05D006017 ORTHO05D007821 4.0e-225 784.6 450 79.3
Migut.M00760 Erythranthe guttata HOM05D006017 ORTHO05D007821 4.0e-225 784.6 431 83.1
GSVIVG01014248001 Vitis vinifera HOM05D006017 ORTHO05D007821 9.0e-225 783.5 433 82.4
Thhalv10013691m.g Eutrema salsugineum HOM05D006017 ORTHO05D007821 2.6e-224 781.9 457 82.3
CiPaw.11G165400 Carya illinoinensis HOM05D006017 ORTHO05D007821 3.4e-224 781.6 432 81.5
HanXRQChr03g0070991 Helianthus annuus HOM05D006017 ORTHO05D007821 3.4e-224 781.6 432 82.2
Lj3g0015312 Lotus japonicus HOM05D006017 ORTHO05D007821 5.8e-224 780.8 444 80.2
Medtr8g463280 Medicago truncatula HOM05D006017 ORTHO05D007821 1.3e-223 779.6 433 81.1
QL08p027671 Quercus lobata HOM05D006017 ORTHO05D007821 1.3e-223 779.6 455 78.7
CAN.G739.4 Capsicum annuum HOM05D006017 ORTHO05D007821 2.9e-223 778.5 481 74.8
Aqoxy1G02214 Aquilegia oxysepala HOM05D006017 ORTHO05D007821 3.8e-223 778.1 448 78.1
AUR62019513 Chenopodium quinoa HOM05D006017 ORTHO05D007821 5.5e-222 774.2 444 79.7
PSO675G4947 Papaver somniferum HOM05D006017 ORTHO05D007821 5.5e-222 774.2 441 79.8
Psat4g138640 Pisum sativum HOM05D006017 ORTHO05D007821 5.5e-222 774.2 433 81.5
ATR0749G089 Amborella trichopoda HOM05D006017 ORTHO05D007821 2.7e-221 771.9 437 79.4
Ca_23058_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 3.5e-221 771.5 433 81.1
Ca_30664_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 3.5e-221 771.5 433 81.1
Lalb_Chr03g0030841 Lupinus albus HOM05D006017 ORTHO05D007821 4.6e-221 771.2 449 78.4
Oeu061327.1 Olea europaea HOM05D006017 ORTHO05D007821 7.9e-221 770.4 468 75.4
Oeu061328.1 Olea europaea HOM05D006017 ORTHO05D007821 7.9e-221 770.4 468 75.4
Phvul.011G148800 Phaseolus vulgaris HOM05D006017 ORTHO05D007821 7.9e-221 770.4 433 80.8
Glyma.12G158600 Glycine max HOM05D006017 ORTHO05D007821 2.3e-220 768.8 439 80.2
arahy.Tifrunner.gnm1.ann1.DSNA77 Arachis hypogaea HOM05D006017 ORTHO05D007821 3.9e-220 768.1 440 78.4
FAN21G1753 Fragaria x ananassa HOM05D006017 ORTHO05D007821 8.7e-220 766.9 463 76.0
arahy.Tifrunner.gnm1.ann1.FV2XB3 Arachis hypogaea HOM05D006017 ORTHO05D007821 4.3e-219 764.6 440 78.4
VMungo1127G0952 Vigna mungo HOM05D006017 ORTHO05D007821 7.4e-219 763.8 436 79.4
Potri.001G374100 Populus trichocarpa HOM05D006017 ORTHO05D007821 1.6e-218 762.7 437 80.5
Sabra16G0246500 Salix brachista HOM05D006017 ORTHO05D007821 5.8e-216 754.2 437 79.9
AUR62036125 Chenopodium quinoa HOM05D006017 ORTHO05D007821 1.1e-214 750.0 447 77.4
Nitab4.5_0003077g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 1.1e-214 750.0 474 74.1
Os06g0103300 Oryza sativa ssp. japonica HOM05D006017 ORTHO05D007821 5.5e-214 747.7 458 75.8
HPP92_003902 Vanilla planifolia HOM05D006017 ORTHO05D007821 3.0e-212 741.9 433 76.9
unitig_46.g18314 Utricularia gibba HOM05D006017 ORTHO05D007821 1.9e-211 739.2 453 75.5
Zm00001eb379510 Zea mays HOM05D006017 ORTHO05D007821 7.7e-208 727.2 453 74.4
Ah.04g164440 Amaranthus hybridus HOM05D006017 ORTHO05D007821 3.6e-205 718.4 448 75.7
Ciclev10008509m.g Citrus clementina HOM05D006017 ORTHO05D007821 1.0e-204 716.8 379 86.5
SGA_v2.0_scaffold73G24213 Striga asiatica HOM05D006017 ORTHO05D007821 2.3e-204 715.7 467 72.2
Nn1g04303 Nelumbo nucifera HOM05D006017 ORTHO05D007821 2.8e-202 708.8 377 84.6
CDE02G3882 Ceratophyllum demersum HOM05D006017 ORTHO05D007821 1.4e-201 706.4 432 74.3
Mapoly0078s0002 Marchantia polymorpha HOM05D006017 ORTHO05D007821 3.3e-195 685.3 440 70.9
Hund22764 Selenicereus undatus HOM05D006017 ORTHO05D007821 1.1e-193 680.2 406 77.1
AagrBONN_evm.TU.Sc2ySwM_228.2578 Anthoceros agrestis HOM05D006017 ORTHO05D007821 1.9e-190 669.5 420 71.0
Pp3c16_940 Physcomitrium patens HOM05D006017 ORTHO05D007821 2.1e-189 666.0 445 68.3
Duzib170G0488 Durio zibethinus HOM05D006017 ORTHO05D007821 1.2e-181 640.2 446 69.5
Nitab4.5_0005445g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 7.2e-174 614.4 423 69.0
SMO119G0176 Selaginella moellendorffii HOM05D006017 ORTHO05D007821 4.7e-173 611.7 442 64.0
FvH4_3g19020 Fragaria vesca HOM05D006017 ORTHO05D007821 8.3e-162 574.3 333 77.5
Hma1.2p1_0416F.1_g148580 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 1.7e-159 566.6 305 83.3
Cre02.g091200 Chlamydomonas reinhardtii HOM05D006017 ORTHO05D007821 1.6e-157 560.1 438 62.1
SalBow8G4076 Salvia bowleyana HOM05D006017 ORTHO05D007821 1.8e-156 556.6 304 82.6
TPR.G22540 Trifolium pratense HOM05D006017 ORTHO05D007821 1.2e-152 543.9 383 68.7
PRCOL_00000185 Prasinoderma coloniale HOM05D006017 ORTHO05D007821 3.3e-150 535.8 456 58.3
MD03G1237500 Malus domestica HOM05D006017 ORTHO05D007821 4.4e-147 525.4 300 79.3
Glyma.06G234200 Glycine max HOM05D006017 ORTHO05D007821 5.1e-127 458.8 271 77.5
BcaC04g20394 Brassica carinata HOM05D006017 ORTHO05D007821 2.4e-92 343.6 434 50.2
CSS0003418 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 1.5e-78 297.7 203 71.9
C09p44170 Brassica napus HOM05D006017 ORTHO05D017343 4.5e-75 286.2 308 55.2
MD03G1237300 Malus domestica HOM05D006017 ORTHO05D007821 1.6e-72 277.7 158 79.1
SEGI_01915 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 3.7e-69 266.5 169 71.0
FAN25G2436 Fragaria x ananassa HOM05D006017 ORTHO05D007821 1.8e-68 264.2 132 87.9
Oeu061326.1 Olea europaea HOM05D006017 ORTHO05D007821 2.3e-63 247.3 132 84.1
Rhsim07G0153900 Rhododendron simsii HOM05D006017 ORTHO05D000252 2.2e-61 240.7 237 53.2
Glyma.06G234050 Glycine max HOM05D006017 ORTHO05D007821 3.7e-61 240.0 133 82.0
TAR436G0001 Trochodendron aralioides HOM05D006017 ORTHO05D007821 2.3e-58 230.7 131 80.2
Nitab4.5_0004022g0010 Nicotiana tabacum HOM05D006017 ORTHO05D007821 9.5e-57 225.3 120 85.8
A10p11370 Brassica napus HOM05D006017 ORTHO05D007821 1.2e-48 198.4 249 50.2
CSS0021316 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 1.3e-45 188.3 114 70.2
TWI38G1497 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 1.7e-45 188.0 119 73.1
BolC9t57289H Brassica oleracea HOM05D006017 ORTHO05D104628 1.4e-31 141.7 182 46.7
SEGI_25954 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 4.4e-30 136.7 95 66.3
FAN25G2983 Fragaria x ananassa HOM05D006017 ORTHO05D007821 2.8e-24 117.5 102 53.9
SEGI_23248 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 2.9e-21 107.5 79 62.0
arahy.Tifrunner.gnm1.ann1.EZ2Q4B Arachis hypogaea HOM05D006004 ORTHO05D006976 3.8e-21 107.1 62 75.8
TWI38G0821 Tripterygium wilfordii HOM05D006017 ORTHO05D413584 8.4e-21 105.9 62 74.2
CSS0031230 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 3.5e-19 100.5 105 48.6
BraA10t43231Z Brassica rapa HOM05D006017 ORTHO05D017343 4.3e-17 93.6 68 64.7
HPP92_003866 Vanilla planifolia HOM05D006017 ORTHO05D007821 6.0e-11 73.2 55 65.5
Mapoly0432s0001 Marchantia polymorpha HOM05D019566 ORTHO05D017343 1.6e-08 65.1 43 65.1


User provided reference genes

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