Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G29180 Arabidopsis lyrata HOM05D008606 ORTHO05D011380 2.3e-60 235.3 117 100.0
AT5G54067 Arabidopsis thaliana HOM05D008606 ORTHO05D011380 3.3e-51 204.9 117 86.3
Carub.0008s1433 Capsella rubella HOM05D008606 ORTHO05D011380 1.8e-44 182.6 118 77.1
AT1G50220 Arabidopsis thaliana HOM05D008606 ORTHO05D011380 2.7e-40 168.7 118 72.9
AL1G57810 Arabidopsis lyrata HOM05D000125 ORTHO05D000120 1.9e-38 162.5 118 71.2
AT1G43171 Arabidopsis thaliana HOM05D008606 ORTHO05D011380 2.8e-37 158.7 106 75.5
CARHR041480 Cardamine hirsuta HOM05D008606 ORTHO05D011380 5.9e-32 141.0 111 64.0
CARHR040260 Cardamine hirsuta HOM05D008606 ORTHO05D011380 1.7e-31 139.4 111 63.1
A06p03610 Brassica napus HOM05D008606 ORTHO05D011380 1.2e-24 116.7 111 55.9
A06p03350 Brassica napus HOM05D008606 ORTHO05D011380 2.7e-24 115.5 111 55.9
BraA06t23543Z Brassica rapa HOM05D008606 ORTHO05D011380 2.7e-24 115.5 111 55.9
BraA06t23567Z Brassica rapa HOM05D008606 ORTHO05D011380 2.7e-24 115.5 111 55.9
BcaB07g33665 Brassica carinata HOM05D008606 ORTHO05D011380 6.0e-24 114.4 111 55.9
Thhalv10000689m.g Eutrema salsugineum HOM05D008606 ORTHO05D011380 7.8e-24 114.0 119 52.1
A06p08700 Brassica napus HOM05D008606 ORTHO05D011380 1.0e-23 113.6 111 55.0
BraA06t24067Z Brassica rapa HOM05D008606 ORTHO05D011380 1.0e-23 113.6 111 55.0
A09p20670 Brassica napus HOM05D008606 ORTHO05D011380 1.3e-23 113.2 111 54.1
BraA09t37671Z Brassica rapa HOM05D008606 ORTHO05D011380 1.3e-23 113.2 111 54.1
BcaB04g20136 Brassica carinata HOM05D008606 ORTHO05D011380 5.0e-23 111.3 111 55.0
BcaB07g33664 Brassica carinata HOM05D008606 ORTHO05D011380 5.0e-23 111.3 111 55.0
BcaNung04519 Brassica carinata HOM05D008606 ORTHO05D011380 8.6e-23 110.5 111 55.0
BcaNung04520 Brassica carinata HOM05D008606 ORTHO05D011380 1.5e-22 109.8 111 54.1
Thhalv10000528m.g Eutrema salsugineum HOM05D008606 ORTHO05D011380 1.2e-21 106.7 119 50.4
Thhalv10000541m.g Eutrema salsugineum HOM05D008606 ORTHO05D011380 4.7e-21 104.8 119 49.6
Carub.0004s0103 Capsella rubella HOM05D008606 ORTHO05D014886 6.2e-21 104.4 114 48.2
Carub.0004s0094 Capsella rubella HOM05D008606 ORTHO05D014886 3.1e-20 102.1 114 45.6
Thhalv10000711m.g Eutrema salsugineum HOM05D008606 ORTHO05D011380 1.2e-19 100.1 119 48.7
AT2G21920 Arabidopsis thaliana HOM05D008606 ORTHO05D014886 2.6e-19 99.0 114 46.5
Carub.0004s0095 Capsella rubella HOM05D008606 ORTHO05D014886 2.6e-19 99.0 114 43.9
CARHR112950 Cardamine hirsuta HOM05D008606 ORTHO05D014886 1.3e-18 96.7 115 45.2
BcaC05g27441 Brassica carinata HOM05D008606 ORTHO05D011380 6.4e-18 94.4 103 48.5
C05p33960 Brassica napus HOM05D008606 ORTHO05D011380 6.4e-18 94.4 103 48.5
BolC5t32130H Brassica oleracea HOM05D008606 ORTHO05D011380 6.4e-18 94.4 103 48.5
Carub.0004s0101 Capsella rubella HOM05D008606 ORTHO05D014886 2.4e-17 92.4 114 43.9
A06p03580 Brassica napus HOM05D008606 ORTHO05D011380 9.2e-17 90.5 79 54.4
Carub.0006s2903 Capsella rubella HOM05D008606 ORTHO05D014886 1.6e-16 89.7 114 38.6
A05p20220 Brassica napus HOM05D008606 ORTHO05D011380 3.5e-16 88.6 103 46.6
BraA05t20932Z Brassica rapa HOM05D008606 ORTHO05D011380 3.5e-16 88.6 103 46.6
BcaB02g11136 Brassica carinata HOM05D008606 ORTHO05D011380 1.1e-14 83.6 103 43.7
Carub.0006s2899 Capsella rubella HOM05D008606 ORTHO05D014886 1.9e-14 82.8 114 41.2
Carub.0240s0002 Capsella rubella HOM05D008606 ORTHO05D014886 1.9e-14 82.8 114 41.2
Carub.0006s2897 Capsella rubella HOM05D008606 ORTHO05D014886 2.5e-14 82.4 114 36.0
Thhalv10000701m.g Eutrema salsugineum HOM05D008606 ORTHO05D011380 4.7e-13 78.2 96 43.8
Thhalv10000608m.g Eutrema salsugineum HOM05D008606 ORTHO05D014886 1.2e-11 73.6 106 37.7
Carub.0006s2911 Capsella rubella HOM05D008606 ORTHO05D014886 4.4e-11 71.6 113 37.2
Carub.0008s0087 Capsella rubella HOM05D008606 ORTHO05D114305 7.5e-11 70.9 87 40.2
BcaNung02938 Brassica carinata HOM05D008606 ORTHO05D011380 1.7e-10 69.7 75 54.7
AT1G50190 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 1.0e-07 60.5 44 75.0


User provided reference genes

Program Settings