Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G29080 Arabidopsis lyrata HOM05D000143 ORTHO05D080398 1.3e-94 349.7 175 100.0
Nitab4.5_0001332g0090 Nicotiana tabacum HOM05D000143 ORTHO05D000072 3.3e-10 69.3 138 34.1
Lj5A92T42 Lonicera japonica HOM05D000143 ORTHO05D000072 1.8e-08 63.5 140 34.3
Dinv30875 Davidia involucrata HOM05D000143 ORTHO05D000072 6.8e-08 61.6 160 30.6
Sp6g12900 Schrenkiella parvula HOM05D000143 ORTHO05D000072 8.9e-08 61.2 96 40.6
ECA246G1703 Erigeron canadensis HOM05D000143 ORTHO05D000072 1.2e-07 60.8 179 28.5
Peaxi162Scf00028g00063 Petunia axillaris HOM05D000143 ORTHO05D000072 1.5e-07 60.5 138 28.3
CARHR257500 Cardamine hirsuta HOM05D000143 ORTHO05D000072 2.0e-07 60.1 96 38.5
Peaxi162Scf01064g00253 Petunia axillaris HOM05D000143 ORTHO05D000072 2.0e-07 60.1 169 31.4
Carub.0008s1078 Capsella rubella HOM05D000143 ORTHO05D000072 3.4e-07 59.3 96 38.5
MELO3C002380.2 Cucumis melo HOM05D000143 ORTHO05D000072 3.4e-07 59.3 127 31.5
PGSC0003DMG401031741 Solanum tuberosum HOM05D000143 ORTHO05D000072 3.4e-07 59.3 86 40.7
HanXRQChr16g0498401 Helianthus annuus HOM05D000143 ORTHO05D000072 4.4e-07 58.9 173 27.7
PGSC0003DMG402031741 Solanum tuberosum HOM05D000143 ORTHO05D000072 4.4e-07 58.9 98 38.8
AL8G24950 Arabidopsis lyrata HOM05D000143 ORTHO05D000072 5.8e-07 58.5 96 38.5
Solyc03g097590.4 Solanum lycopersicum HOM05D000143 ORTHO05D000072 5.8e-07 58.5 86 40.7
AT5G50790 Arabidopsis thaliana HOM05D000143 ORTHO05D000072 7.6e-07 58.2 96 37.5
arahy.Tifrunner.gnm1.ann1.9TLR89 Arachis hypogaea HOM05D000143 ORTHO05D000072 7.6e-07 58.2 153 28.1
CAN.G758.6 Capsicum annuum HOM05D000143 ORTHO05D000072 7.6e-07 58.2 98 39.8
Peaxi162Scf00516g00012 Petunia axillaris HOM05D000143 ORTHO05D000072 7.6e-07 58.2 172 32.0
HanXRQChr08g0236531 Helianthus annuus HOM05D000143 ORTHO05D000072 9.9e-07 57.8 173 27.7
Sed0023171 Sechium edule HOM05D000143 ORTHO05D000072 9.9e-07 57.8 179 29.6
Solyc03g097610.3 Solanum lycopersicum HOM05D000143 ORTHO05D000072 9.9e-07 57.8 93 41.9
Solyc03g097870.4 Solanum lycopersicum HOM05D000143 ORTHO05D000072 9.9e-07 57.8 98 38.8
Solyc06g072620.4 Solanum lycopersicum HOM05D000143 ORTHO05D000072 9.9e-07 57.8 86 40.7
Sopen03g028350 Solanum pennellii HOM05D000143 ORTHO05D000072 9.9e-07 57.8 98 37.8
Sopen03g028360 Solanum pennellii HOM05D000143 ORTHO05D000072 9.9e-07 57.8 93 41.9
Sopen03g028610 Solanum pennellii HOM05D000143 ORTHO05D000072 9.9e-07 57.8 98 38.8
Sopen06g028970 Solanum pennellii HOM05D000143 ORTHO05D000072 9.9e-07 57.8 86 40.7
arahy.Tifrunner.gnm1.ann1.DV46W1 Arachis hypogaea HOM05D000143 ORTHO05D000072 1.3e-06 57.4 158 27.8
TAR622G1024 Trochodendron aralioides HOM05D000143 ORTHO05D000072 1.3e-06 57.4 167 29.9
CSS0026264 Camellia sinensis var. sinensis HOM05D000143 ORTHO05D000072 1.7e-06 57.0 176 26.7
Lsat_1_v5_gn_5_11161 Lactuca sativa HOM05D000143 ORTHO05D000072 1.7e-06 57.0 175 28.6
Nitab4.5_0001332g0130 Nicotiana tabacum HOM05D000143 ORTHO05D000072 1.7e-06 57.0 93 39.8
PGSC0003DMG400031742 Solanum tuberosum HOM05D000143 ORTHO05D000072 1.7e-06 57.0 93 41.9
Aqoxy3G01681 Aquilegia oxysepala HOM05D000143 ORTHO05D000072 2.2e-06 56.6 168 31.0
CAN.G758.3 Capsicum annuum HOM05D000143 ORTHO05D000072 2.2e-06 56.6 93 39.8
Nitab4.5_0005940g0020 Nicotiana tabacum HOM05D000143 ORTHO05D000072 2.2e-06 56.6 93 40.9
Lsat_1_v5_gn_4_82321 Lactuca sativa HOM05D000143 ORTHO05D000072 2.9e-06 56.2 94 34.0
Nitab4.5_0005940g0010 Nicotiana tabacum HOM05D000143 ORTHO05D000072 2.9e-06 56.2 93 39.8
Sopen03g028340 Solanum pennellii HOM05D000143 ORTHO05D000072 2.9e-06 56.2 86 39.5
PGSC0003DMG400033693 Solanum tuberosum HOM05D000143 ORTHO05D000072 2.9e-06 56.2 98 36.7
Actinidia08891 Actinidia chinensis HOM05D000143 ORTHO05D000072 3.8e-06 55.8 145 34.5
Migut.E00003 Erythranthe guttata HOM05D000143 ORTHO05D000072 3.8e-06 55.8 132 30.3
Nitab4.5_0001332g0120 Nicotiana tabacum HOM05D000143 ORTHO05D000072 3.8e-06 55.8 98 38.8
Nitab4.5_0001464g0020 Nicotiana tabacum HOM05D000143 ORTHO05D000072 3.8e-06 55.8 96 38.5
Nitab4.5_0006905g0010 Nicotiana tabacum HOM05D000143 ORTHO05D000072 3.8e-06 55.8 93 39.8
Nitab4.5_0014511g0010 Nicotiana tabacum HOM05D000143 ORTHO05D000072 3.8e-06 55.8 96 38.5
Peaxi162Scf00516g00025 Petunia axillaris HOM05D000143 ORTHO05D000072 3.8e-06 55.8 96 39.6
Solyc03g097560.3 Solanum lycopersicum HOM05D000143 ORTHO05D000072 3.8e-06 55.8 164 29.3
Sopen03g028310 Solanum pennellii HOM05D000143 ORTHO05D000072 3.8e-06 55.8 164 29.3
HPP92_011767 Vanilla planifolia HOM05D000143 ORTHO05D000072 3.8e-06 55.8 160 30.0
MELO3C026184.2 Cucumis melo HOM05D000143 ORTHO05D000072 4.9e-06 55.5 179 28.5
Nitab4.5_0000033g0030 Nicotiana tabacum HOM05D000143 ORTHO05D000072 4.9e-06 55.5 160 30.0
Nitab4.5_0001464g0010 Nicotiana tabacum HOM05D000143 ORTHO05D000072 4.9e-06 55.5 93 39.8
Peaxi162Scf00647g00518 Petunia axillaris HOM05D000143 ORTHO05D000072 4.9e-06 55.5 93 38.7
HPP92_025287 Vanilla planifolia HOM05D000143 ORTHO05D000072 4.9e-06 55.5 160 29.4
CAN.G758.2 Capsicum annuum HOM05D000143 ORTHO05D000072 6.4e-06 55.1 93 38.7
CsaV3_1G000310 Cucumis sativus L. HOM05D000143 ORTHO05D000072 6.4e-06 55.1 179 28.5
HanXRQChr16g0498381 Helianthus annuus HOM05D000143 ORTHO05D000072 6.4e-06 55.1 94 34.0
HanXRQChr16g0498391 Helianthus annuus HOM05D000143 ORTHO05D000072 6.4e-06 55.1 94 34.0
Nitab4.5_0001332g0140 Nicotiana tabacum HOM05D000143 ORTHO05D000072 6.4e-06 55.1 93 38.7
Nitab4.5_0009485g0020 Nicotiana tabacum HOM05D000143 ORTHO05D000072 6.4e-06 55.1 93 39.8
Actinidia25548 Actinidia chinensis HOM05D000143 ORTHO05D000072 8.4e-06 54.7 177 29.9
C03p19520 Brassica napus HOM05D000143 ORTHO05D000072 8.4e-06 54.7 96 38.5
BolC3t14333H Brassica oleracea HOM05D000143 ORTHO05D000072 8.4e-06 54.7 96 38.5
Glyma.04G198600 Glycine max HOM05D000143 ORTHO05D000072 8.4e-06 54.7 175 28.0
QL10p001813 Quercus lobata HOM05D000143 ORTHO05D000072 8.4e-06 54.7 156 28.8
Solyc05g024260.3 Solanum lycopersicum HOM05D000143 ORTHO05D000072 8.4e-06 54.7 161 30.4
Sopen05g019130 Solanum pennellii HOM05D000143 ORTHO05D000072 8.4e-06 54.7 161 30.4
HPP92_011763 Vanilla planifolia HOM05D000143 ORTHO05D000072 8.4e-06 54.7 160 29.4


User provided reference genes

Program Settings