Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G27980 Arabidopsis lyrata HOM05D004891 ORTHO05D005997 9.9e-77 290.0 146 100.0
AL8G27930 Arabidopsis lyrata HOM05D004891 ORTHO05D005997 1.0e-73 280.0 146 97.3
AT5G53280 Arabidopsis thaliana HOM05D004891 ORTHO05D005997 2.4e-70 268.9 146 93.2
Carub.0008s1346 Capsella rubella HOM05D004891 ORTHO05D005997 1.0e-65 253.4 148 89.2
CARHR266320 Cardamine hirsuta HOM05D004891 ORTHO05D005997 7.6e-61 237.3 146 84.2
Sp6g15430 Schrenkiella parvula HOM05D004891 ORTHO05D005997 1.3e-60 236.5 147 83.0
Thhalv10014380m.g Eutrema salsugineum HOM05D004891 ORTHO05D005997 7.1e-59 230.7 147 82.3
BcaB08g35688 Brassica carinata HOM05D004891 ORTHO05D005997 8.4e-52 207.2 148 77.0
BcaB01g04239 Brassica carinata HOM05D004891 ORTHO05D005997 6.9e-46 187.6 148 70.3
BcaC04g20477 Brassica carinata HOM05D004891 ORTHO05D005997 6.5e-44 181.0 146 71.2
C09p43070 Brassica napus HOM05D004891 ORTHO05D005997 6.5e-44 181.0 146 71.2
BolC9t57178H Brassica oleracea HOM05D004891 ORTHO05D005997 6.5e-44 181.0 146 71.2
C03p17830 Brassica napus HOM05D004891 ORTHO05D005997 3.2e-43 178.7 148 68.9
Aa31LG3G9250 Aethionema arabicum HOM05D004891 ORTHO05D005997 4.2e-43 178.3 147 67.3
BolC3t14190H Brassica oleracea HOM05D004891 ORTHO05D005997 4.2e-43 178.3 148 68.9
BraA10t43162Z Brassica rapa HOM05D004891 ORTHO05D005997 9.3e-43 177.2 145 70.3
A10p10800 Brassica napus HOM05D004891 ORTHO05D005997 2.7e-42 175.6 145 70.3
THA.LOC104825132 Tarenaya hassleriana HOM05D004891 ORTHO05D005997 4.6e-42 174.9 147 63.9
BraA03t10818Z Brassica rapa HOM05D004891 ORTHO05D005997 6.0e-42 174.5 148 67.6
A03p15250 Brassica napus HOM05D004891 ORTHO05D005997 1.3e-41 173.3 148 67.6
BcaC01g06235 Brassica carinata HOM05D004891 ORTHO05D005997 1.5e-37 159.8 115 73.0
Cpa.g.sc3.45 Carica papaya HOM05D004891 ORTHO05D005997 5.1e-33 144.8 148 52.7
Sabra12G0021600 Salix brachista HOM05D004891 ORTHO05D005997 5.7e-32 141.4 147 52.4
Potri.012G032200 Populus trichocarpa HOM05D004891 ORTHO05D005997 1.7e-31 139.8 147 53.1
Thecc.03G192100 Theobroma cacao HOM05D004891 ORTHO05D005997 1.7e-28 129.8 147 46.9
Dinv28341 Davidia involucrata HOM05D004891 ORTHO05D005997 4.2e-27 125.2 150 46.7
Potri.015G022900 Populus trichocarpa HOM05D004891 ORTHO05D005997 7.2e-27 124.4 148 48.6
Ciclev10005604m.g Citrus clementina HOM05D004891 ORTHO05D005997 9.4e-27 124.0 147 47.6
Cfa016358 Carpinus fangiana HOM05D004891 ORTHO05D005997 2.1e-26 122.9 148 48.0
CiPaw.05G258300 Carya illinoinensis HOM05D004891 ORTHO05D005997 2.7e-26 122.5 147 44.2
COL.COLO4_35665 Corchorus olitorius HOM05D004891 ORTHO05D005997 4.7e-26 121.7 149 45.6
Haze_00106 Corylus avellana HOM05D004891 ORTHO05D005997 6.1e-26 121.3 148 48.0
Duzib084G0775 Durio zibethinus HOM05D004891 ORTHO05D005997 7.9e-26 120.9 147 45.6
TAR375G0232 Trochodendron aralioides HOM05D004891 ORTHO05D005997 1.1e-24 117.1 152 44.7
Hma1.2p1_0327F.1_g126710 Hydrangea macrophylla HOM05D004891 ORTHO05D005997 1.5e-24 116.7 150 45.3
Manes.14G018900 Manihot esculenta HOM05D004891 ORTHO05D005997 2.6e-24 115.9 147 46.3
ClCG05G008660 Citrullus lanatus HOM05D004891 ORTHO05D005997 7.4e-24 114.4 147 44.9
Gohir.A12G252100 Gossypium hirsutum HOM05D004891 ORTHO05D005997 7.4e-24 114.4 147 44.2
vmacro06579 Vaccinium macrocarpon HOM05D004891 ORTHO05D005997 9.7e-24 114.0 151 47.0
vmacro23247 Vaccinium macrocarpon HOM05D004891 ORTHO05D005997 9.7e-24 114.0 151 47.0
GSVIVG01028731001 Vitis vinifera HOM05D004891 ORTHO05D005997 9.7e-24 114.0 152 43.4
Gorai.008G271100 Gossypium raimondii HOM05D004891 ORTHO05D005997 1.3e-23 113.6 147 43.5
Rhsim03G0198300 Rhododendron simsii HOM05D004891 ORTHO05D005997 1.7e-23 113.2 151 44.4
Actinidia08623 Actinidia chinensis HOM05D004891 ORTHO05D005997 2.2e-23 112.8 151 43.7
FAN10G2020 Fragaria x ananassa HOM05D004891 ORTHO05D005997 3.7e-23 112.1 147 43.5
FAN10G2063 Fragaria x ananassa HOM05D004891 ORTHO05D005997 3.7e-23 112.1 147 43.5
Gohir.D12G253400 Gossypium hirsutum HOM05D004891 ORTHO05D005997 3.7e-23 112.1 147 42.9
Phvul.008G159100 Phaseolus vulgaris HOM05D004891 ORTHO05D005997 3.7e-23 112.1 149 45.6
Sabra15G0017200 Salix brachista HOM05D004891 ORTHO05D005997 3.7e-23 112.1 134 47.8
VMungo0647G1360 Vigna mungo HOM05D004891 ORTHO05D005997 4.8e-23 111.7 150 46.0
FAN06G0473 Fragaria x ananassa HOM05D004891 ORTHO05D005997 6.3e-23 111.3 147 42.2
QL09p011070 Quercus lobata HOM05D004891 ORTHO05D005997 8.2e-23 110.9 147 43.5
Actinidia34190 Actinidia chinensis HOM05D004891 ORTHO05D005997 1.8e-22 109.8 151 42.4
CsaV3_3G021850 Cucumis sativus L. HOM05D004891 ORTHO05D005997 2.4e-22 109.4 147 44.9
Sed0007260 Sechium edule HOM05D004891 ORTHO05D005997 2.4e-22 109.4 147 44.9
TWI23G0467 Tripterygium wilfordii HOM05D004891 ORTHO05D005997 3.1e-22 109.0 146 41.1
FAN03G3090 Fragaria x ananassa HOM05D004891 ORTHO05D005997 4.1e-22 108.6 147 41.5
Lj1g0012174 Lotus japonicus HOM05D004891 ORTHO05D005997 4.1e-22 108.6 146 43.2
Lalb_Chr01g0014881 Lupinus albus HOM05D004891 ORTHO05D005997 4.1e-22 108.6 150 46.0
FAN01G2480 Fragaria x ananassa HOM05D004891 ORTHO05D005997 5.3e-22 108.2 147 41.5
RcHm_v2.0_Chr1g0380031 Rosa chinensis HOM05D004891 ORTHO05D005997 5.3e-22 108.2 147 42.9
FvH4_7g30940 Fragaria vesca HOM05D004891 ORTHO05D005997 7.0e-22 107.8 147 41.5
FAN06G4508 Fragaria x ananassa HOM05D004891 ORTHO05D005997 7.0e-22 107.8 147 41.5
Prupe.2G306500 Prunus persica HOM05D004891 ORTHO05D005997 7.0e-22 107.8 146 43.2
MELO3C006974.2 Cucumis melo HOM05D004891 ORTHO05D005997 9.1e-22 107.5 147 44.9
Glyma.14G123700 Glycine max HOM05D004891 ORTHO05D005997 9.1e-22 107.5 147 43.5
CSS0025805 Camellia sinensis var. sinensis HOM05D004891 ORTHO05D005997 1.5e-21 106.7 152 43.4
MBI06_g22405_MAGBIO Magnolia biondii HOM05D004891 ORTHO05D005997 1.5e-21 106.7 151 40.4
SGA_v2.0_scaffold10G05259 Striga asiatica HOM05D004891 ORTHO05D005997 1.5e-21 106.7 147 42.9
Nn7g37380 Nelumbo nucifera HOM05D004891 ORTHO05D005997 2.0e-21 106.3 151 41.1
arahy.Tifrunner.gnm1.ann1.PB2THD Arachis hypogaea HOM05D004891 ORTHO05D005997 3.4e-21 105.5 146 41.8
arahy.Tifrunner.gnm1.ann1.6V5JG4 Arachis hypogaea HOM05D004891 ORTHO05D005997 4.5e-21 105.1 146 42.5
MSTRG.8493 Avicennia marina HOM05D004891 ORTHO05D005997 4.5e-21 105.1 152 42.1
CSS0046287 Camellia sinensis var. sinensis HOM05D004891 ORTHO05D005997 5.9e-21 104.8 152 43.4
Glyma.13G040300 Glycine max HOM05D004891 ORTHO05D005997 7.7e-21 104.4 148 43.9
Manes.06G156500 Manihot esculenta HOM05D004891 ORTHO05D005997 1.7e-20 103.2 147 44.9
Lj3A911G21 Lonicera japonica HOM05D004891 ORTHO05D005997 2.9e-20 102.4 151 41.1
TWI14G0964 Tripterygium wilfordii HOM05D004891 ORTHO05D005997 2.9e-20 102.4 147 41.5
Nitab4.5_0000473g0100 Nicotiana tabacum HOM05D004891 ORTHO05D005997 3.8e-20 102.1 150 42.0
MD07G1284300 Malus domestica HOM05D004891 ORTHO05D005997 5.0e-20 101.7 147 43.5
Sed0021890 Sechium edule HOM05D004891 ORTHO05D005997 8.5e-20 100.9 147 40.8
TPR.G33305 Trifolium pratense HOM05D004891 ORTHO05D005997 1.1e-19 100.5 147 42.2
CiPaw.06G007100 Carya illinoinensis HOM05D004891 ORTHO05D005997 1.4e-19 100.1 147 44.2
CANSAT21G1757 Cannabis sativa HOM05D004891 ORTHO05D005997 1.9e-19 99.8 147 44.2
PGR142G0227 Punica granatum HOM05D004891 ORTHO05D005997 1.9e-19 99.8 146 39.0
Medtr1g028580 Medicago truncatula HOM05D004891 ORTHO05D005997 2.5e-19 99.4 146 39.0
SalBow2G0402 Salvia bowleyana HOM05D004891 ORTHO05D005997 2.5e-19 99.4 147 40.8
AUR62021048 Chenopodium quinoa HOM05D004891 ORTHO05D005997 9.4e-19 97.4 147 38.8
Cc02_g01930 Coffea canephora HOM05D004891 ORTHO05D005997 9.4e-19 97.4 150 40.0
Eucgr.K00322 Eucalyptus grandis HOM05D004891 ORTHO05D005997 9.4e-19 97.4 146 41.1
MD01G1214600 Malus domestica HOM05D004891 ORTHO05D005997 1.6e-18 96.7 148 43.9
TAR374G1584 Trochodendron aralioides HOM05D004891 ORTHO05D005997 1.6e-18 96.7 105 48.6
CAN.G108.22 Capsicum annuum HOM05D004891 ORTHO05D005997 2.1e-18 96.3 150 40.7
AUR62031485 Chenopodium quinoa HOM05D004891 ORTHO05D005997 2.1e-18 96.3 147 38.1
Actinidia03156 Actinidia chinensis HOM05D004891 ORTHO05D005997 2.7e-18 95.9 148 39.9
DCAR_014529 Daucus carota HOM05D004891 ORTHO05D005997 2.7e-18 95.9 150 37.3
Nitab4.5_0000472g0010 Nicotiana tabacum HOM05D004891 ORTHO05D005997 3.6e-18 95.5 150 40.7
Sc19g0001110 Simmondsia chinensis HOM05D004891 ORTHO05D005997 3.6e-18 95.5 146 42.5
HanXRQChr14g0462811 Helianthus annuus HOM05D004891 ORTHO05D005997 4.7e-18 95.1 147 38.1
Psat6g039240 Pisum sativum HOM05D004891 ORTHO05D005997 8.0e-18 94.4 100 48.0
PGSC0003DMG400009098 Solanum tuberosum HOM05D004891 ORTHO05D005997 1.4e-17 93.6 150 40.7
Sopen03g003400 Solanum pennellii HOM05D004891 ORTHO05D005997 3.0e-17 92.4 150 40.7
PSO063G3645 Papaver somniferum HOM05D004891 ORTHO05D005997 3.9e-17 92.0 151 37.7
PSO170G4664 Papaver somniferum HOM05D004891 ORTHO05D005997 5.2e-17 91.7 150 37.3
Sopen03g003460 Solanum pennellii HOM05D004891 ORTHO05D005997 5.2e-17 91.7 150 40.0
MSTRG.23354 Avicennia marina HOM05D004891 ORTHO05D005997 1.5e-16 90.1 152 38.2
ECA238G3691 Erigeron canadensis HOM05D004891 ORTHO05D005997 2.0e-16 89.7 147 38.1
Aqoxy5G04112 Aquilegia oxysepala HOM05D004891 ORTHO05D005997 2.6e-16 89.4 151 36.4
unitig_90.g27528 Utricularia gibba HOM05D004891 ORTHO05D005997 3.3e-16 89.0 147 36.1
Oeu024464.1 Olea europaea HOM05D004891 ORTHO05D005997 9.7e-16 87.4 155 36.1
Hund11687 Selenicereus undatus HOM05D004891 ORTHO05D005997 2.2e-15 86.3 146 39.0
EL10Ac3g05352 Beta vulgaris HOM05D004891 ORTHO05D005997 2.8e-15 85.9 145 37.9
Lsat_1_v5_gn_2_134260 Lactuca sativa HOM05D004891 ORTHO05D005997 1.4e-14 83.6 148 39.2
Ah.07g206050 Amaranthus hybridus HOM05D004891 ORTHO05D005997 2.4e-14 82.8 150 40.7
Hund11688 Selenicereus undatus HOM05D004891 ORTHO05D005997 7.0e-14 81.3 146 37.7
Oeu037109.1 Olea europaea HOM05D004891 ORTHO05D005997 1.2e-13 80.5 151 33.1
Ah.13g069830 Amaranthus hybridus HOM05D004891 ORTHO05D005997 2.0e-13 79.7 152 39.5
Hund04825 Selenicereus undatus HOM05D004891 ORTHO05D005997 2.0e-13 79.7 148 35.8
CDE10G0607 Ceratophyllum demersum HOM05D004891 ORTHO05D005997 2.6e-13 79.3 155 33.5
Migut.F01055 Erythranthe guttata HOM05D004891 ORTHO05D005997 2.6e-13 79.3 152 36.2
CDE10G1089 Ceratophyllum demersum HOM05D004891 ORTHO05D005997 5.0e-12 75.1 150 32.0
Os06g0506000 Oryza sativa ssp. japonica HOM05D004891 ORTHO05D005997 5.0e-12 75.1 148 35.8
HPP92_024018 Vanilla planifolia HOM05D004891 ORTHO05D005997 7.2e-11 71.2 153 34.0
Lj1C1012T12 Lonicera japonica HOM05D004891 ORTHO05D005997 3.6e-10 68.9 150 36.7
Oeu036883.1 Olea europaea HOM05D004891 ORTHO05D005997 4.7e-10 68.6 151 36.4
ATR1093G054 Amborella trichopoda HOM05D004891 ORTHO05D005997 5.2e-09 65.1 162 32.7
Actinidia34193 Actinidia chinensis HOM05D004891 ORTHO05D005997 1.2e-08 63.9 97 39.2
Zm00001eb203870 Zea mays HOM05D004891 ORTHO05D005997 2.6e-08 62.8 148 32.4
Zm00001eb237900 Zea mays HOM05D004891 ORTHO05D005997 6.3e-07 58.2 124 29.8


User provided reference genes

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