Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G27940 Arabidopsis lyrata HOM05D025358 ORTHO05D018436 7.9e-130 467.6 334 100.0
AL9U11860 Arabidopsis lyrata HOM05D000129 ORTHO05D023664 2.2e-23 114.0 81 72.8
BcaC09g50644 Brassica carinata HOM05D025358 ORTHO05D039151 1.9e-11 74.3 177 29.4
AL1G44910 Arabidopsis lyrata HOM05D025358 ORTHO05D080073 9.7e-11 72.0 152 28.9
Carub.0001s3188 Capsella rubella HOM05D017308 ORTHO05D018436 6.3e-10 69.3 153 33.3
AL1G44450 Arabidopsis lyrata HOM05D025358 ORTHO05D079505 1.1e-09 68.6 111 36.0
HanXRQChr11g0322751 Helianthus annuus HOM05D000010 ORTHO05D000151 2.6e-08 63.9 179 26.8
QL05p038762 Quercus lobata HOM05D000010 ORTHO05D000151 3.4e-08 63.5 135 34.1
Hma1.2p1_1030F.1_g249870 Hydrangea macrophylla HOM05D000010 ORTHO05D000151 4.5e-08 63.2 132 32.6
QL07p044768 Quercus lobata HOM05D000010 ORTHO05D000151 4.5e-08 63.2 130 33.8
Nitab4.5_0001583g0060 Nicotiana tabacum HOM05D000010 ORTHO05D000865 5.9e-08 62.8 135 32.6
Oeu050098.1 Olea europaea HOM05D000010 ORTHO05D000151 5.9e-08 62.8 128 32.8
Peaxi162Scf00351g00112 Petunia axillaris HOM05D000010 ORTHO05D000151 7.7e-08 62.4 157 29.9
Dinv32765 Davidia involucrata HOM05D000010 ORTHO05D000151 1.0e-07 62.0 133 31.6
Eucgr.D00665 Eucalyptus grandis HOM05D000010 ORTHO05D000151 1.0e-07 62.0 141 32.6
Glyma.08G307100 Glycine max HOM05D000010 ORTHO05D000865 1.0e-07 62.0 137 32.8
Peaxi162Scf00182g00711 Petunia axillaris HOM05D000010 ORTHO05D000151 1.0e-07 62.0 174 29.9
Phvul.006G023100 Phaseolus vulgaris HOM05D000010 ORTHO05D000865 1.0e-07 62.0 137 32.8
Lj1A188T28 Lonicera japonica HOM05D000010 ORTHO05D000151 1.3e-07 61.6 134 33.6
Manes.11G142800 Manihot esculenta HOM05D000010 ORTHO05D000151 1.7e-07 61.2 141 34.0
Actinidia07125 Actinidia chinensis HOM05D000010 ORTHO05D000151 2.2e-07 60.8 135 31.9
Haze_20616 Corylus avellana HOM05D000010 ORTHO05D000151 2.2e-07 60.8 130 33.8
Glyma.18G110700 Glycine max HOM05D000010 ORTHO05D000865 2.2e-07 60.8 137 32.1
Sabra10G0126500 Salix brachista HOM05D000010 ORTHO05D000151 2.2e-07 60.8 128 32.0
Hund02199 Selenicereus undatus HOM05D000010 ORTHO05D000151 2.2e-07 60.8 140 32.1
Sc16g0006850 Simmondsia chinensis HOM05D000010 ORTHO05D000151 2.2e-07 60.8 130 33.8
Duzib192G0226 Durio zibethinus HOM05D000010 ORTHO05D000151 2.9e-07 60.5 130 33.1
BcaC02g07212 Brassica carinata HOM05D000010 ORTHO05D000865 3.8e-07 60.1 134 32.1
A10p15300 Brassica napus HOM05D007865 ORTHO05D010123 3.8e-07 60.1 164 29.3
BNapus_Darmor_BZH_scaffold_64p00150 Brassica napus HOM05D000010 ORTHO05D000865 3.8e-07 60.1 134 32.1
C04p70010 Brassica napus HOM05D000010 ORTHO05D000865 3.8e-07 60.1 134 32.1
BolC4t28501H Brassica oleracea HOM05D000010 ORTHO05D000865 3.8e-07 60.1 134 32.1
BraA04t18702Z Brassica rapa HOM05D000010 ORTHO05D000865 3.8e-07 60.1 134 32.1
ClCG02G018510 Citrullus lanatus HOM05D000010 ORTHO05D000865 3.8e-07 60.1 136 29.4
ECA233G4652 Erigeron canadensis HOM05D000010 ORTHO05D000151 3.8e-07 60.1 133 31.6
SGA_v2.0_scaffold7G03593 Striga asiatica HOM05D000010 ORTHO05D000865 3.8e-07 60.1 134 30.6
A10p15310 Brassica napus HOM05D007865 ORTHO05D010123 5.0e-07 59.7 164 29.3
Sc03g0009720 Simmondsia chinensis HOM05D000010 ORTHO05D000151 5.0e-07 59.7 135 32.6
TAR362G0680 Trochodendron aralioides HOM05D000010 ORTHO05D001550 6.5e-07 59.3 171 25.7
Eucgr.I00058 Eucalyptus grandis HOM05D000010 ORTHO05D000151 1.1e-06 58.5 128 33.6
Manes.17G050100 Manihot esculenta HOM05D000010 ORTHO05D000151 1.1e-06 58.5 130 32.3
PGSC0003DMG400032555 Solanum tuberosum HOM05D000010 ORTHO05D000151 1.1e-06 58.5 127 30.7
SGA_v2.0_scaffold186G40212 Striga asiatica HOM05D000010 ORTHO05D000865 1.1e-06 58.5 131 30.5
BcaB08g36307 Brassica carinata HOM05D007865 ORTHO05D010123 1.4e-06 58.2 194 23.7
BraA10t43702Z Brassica rapa HOM05D007865 ORTHO05D010123 1.4e-06 58.2 164 28.7
Peaxi162Scf00842g00211 Petunia axillaris HOM05D000010 ORTHO05D000151 1.4e-06 58.2 127 31.5
A03p23880 Brassica napus HOM05D000244 ORTHO05D000865 1.9e-06 57.8 131 32.1
HPP92_002941 Vanilla planifolia HOM05D000010 ORTHO05D000151 1.9e-06 57.8 132 33.3
AT5G18300 Arabidopsis thaliana HOM05D007865 ORTHO05D010123 2.5e-06 57.4 144 31.2
TAR628G0673 Trochodendron aralioides HOM05D000010 ORTHO05D003408 2.5e-06 57.4 132 32.6
BolC9t57977H Brassica oleracea HOM05D007865 ORTHO05D010123 3.2e-06 57.0 162 27.2
CSS0020712 Camellia sinensis var. sinensis HOM05D000010 ORTHO05D000151 3.2e-06 57.0 133 30.8
Gohir.D01G007450 Gossypium hirsutum HOM05D000010 ORTHO05D048137 3.2e-06 57.0 133 32.3
Oeu005893.1 Olea europaea HOM05D000010 ORTHO05D000151 3.2e-06 57.0 135 30.4
SMO364G0230 Selaginella moellendorffii HOM05D000010 ORTHO05D000151 3.2e-06 57.0 159 28.9
CSS0036836 Camellia sinensis var. sinensis HOM05D000010 ORTHO05D000151 4.2e-06 56.6 127 32.3
CSS0047536 Camellia sinensis var. sinensis HOM05D000010 ORTHO05D000151 4.2e-06 56.6 127 32.3
PGSC0003DMG400021119 Solanum tuberosum HOM05D000010 ORTHO05D000865 4.2e-06 56.6 131 29.8
CAN.G1861.9 Capsicum annuum HOM05D000010 ORTHO05D000151 5.5e-06 56.2 127 30.7
HanXRQChr13g0407321 Helianthus annuus HOM05D000010 ORTHO05D000151 5.5e-06 56.2 128 33.6
Potri.001G080900 Populus trichocarpa HOM05D000010 ORTHO05D000865 5.5e-06 56.2 134 30.6
SMO367G1241 Selaginella moellendorffii HOM05D000010 ORTHO05D000151 5.5e-06 56.2 130 33.1
Actinidia37116 Actinidia chinensis HOM05D000010 ORTHO05D000865 7.2e-06 55.8 150 28.0
BcaC03g13243 Brassica carinata HOM05D000010 ORTHO05D000151 7.2e-06 55.8 127 31.5
C02p03750 Brassica napus HOM05D000010 ORTHO05D000151 7.2e-06 55.8 127 31.5
BolC2t06336H Brassica oleracea HOM05D000010 ORTHO05D000151 7.2e-06 55.8 127 31.5
BraA02t04970Z Brassica rapa HOM05D000010 ORTHO05D000151 7.2e-06 55.8 127 31.5
CiPaw.10G112500 Carya illinoinensis HOM05D000010 ORTHO05D000865 7.2e-06 55.8 145 28.3
Duzib128G0932 Durio zibethinus HOM05D000010 ORTHO05D000151 7.2e-06 55.8 140 31.4
Nitab4.5_0010993g0020 Nicotiana tabacum HOM05D000010 ORTHO05D000151 7.2e-06 55.8 127 30.7
FvH4_1g25150 Fragaria vesca HOM05D000010 ORTHO05D000151 9.4e-06 55.5 127 31.5
FAN19G0816 Fragaria x ananassa HOM05D000010 ORTHO05D000151 9.4e-06 55.5 127 31.5
FAN23G1606 Fragaria x ananassa HOM05D000010 ORTHO05D000151 9.4e-06 55.5 127 31.5
FAN26G2401 Fragaria x ananassa HOM05D000010 ORTHO05D000151 9.4e-06 55.5 127 31.5
FAN28G2118 Fragaria x ananassa HOM05D000010 ORTHO05D000151 9.4e-06 55.5 127 31.5
Gorai.002G008500 Gossypium raimondii HOM05D000010 ORTHO05D048137 9.4e-06 55.5 133 32.3
RcHm_v2.0_Chr2g0122871 Rosa chinensis HOM05D000010 ORTHO05D000151 9.4e-06 55.5 127 31.5


User provided reference genes

Program Settings