Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G27400 Arabidopsis lyrata HOM05D003466 ORTHO05D004102 4.2e-166 588.2 346 100.0
Carub.0008s1310 Capsella rubella HOM05D003466 ORTHO05D004102 6.5e-26 122.5 76 82.9
CARHR265890 Cardamine hirsuta HOM05D003466 ORTHO05D004102 2.3e-23 114.0 74 79.7
Aa31LG11G11660 Aethionema arabicum HOM05D003466 ORTHO05D004102 4.3e-22 109.8 112 57.1
THA.LOC104820792 Tarenaya hassleriana HOM05D003466 ORTHO05D004102 2.8e-21 107.1 87 65.5
Thhalv10013587m.g Eutrema salsugineum HOM05D003466 ORTHO05D004102 3.7e-21 106.7 88 67.0
THA.LOC104802883 Tarenaya hassleriana HOM05D003466 ORTHO05D004102 8.2e-21 105.5 87 63.2
BcaB01g04922 Brassica carinata HOM05D003466 ORTHO05D004102 1.4e-20 104.8 84 66.7
CARHR195220 Cardamine hirsuta HOM05D003466 ORTHO05D004102 1.4e-20 104.8 116 58.6
Duzib106G0204 Durio zibethinus HOM05D003466 ORTHO05D004102 1.8e-20 104.4 87 60.9
Thecc.05G242600 Theobroma cacao HOM05D003466 ORTHO05D004102 1.8e-20 104.4 87 63.2
AT5G17900 Arabidopsis thaliana HOM05D003466 ORTHO05D004102 2.4e-20 104.0 87 64.4
BcaC04g18745 Brassica carinata HOM05D003466 ORTHO05D004102 3.1e-20 103.6 84 66.7
CANSAT25G0815 Cannabis sativa HOM05D003466 ORTHO05D004102 3.1e-20 103.6 108 52.8
CANSAT80G2535 Cannabis sativa HOM05D003466 ORTHO05D004102 3.1e-20 103.6 108 52.8
CAN.G1076.6 Capsicum annuum HOM05D003466 ORTHO05D004102 3.1e-20 103.6 108 52.8
Sed0012489 Sechium edule HOM05D003466 ORTHO05D004102 3.1e-20 103.6 108 52.8
vmacro10385 Vaccinium macrocarpon HOM05D003466 ORTHO05D004102 3.1e-20 103.6 112 50.0
Atru.chr7.542 Acer truncatum HOM05D003466 ORTHO05D004102 4.1e-20 103.2 87 62.1
Eucgr.J03113 Eucalyptus grandis HOM05D003466 ORTHO05D004102 4.1e-20 103.2 118 50.8
Peaxi162Scf00071g00424 Petunia axillaris HOM05D003466 ORTHO05D004102 4.1e-20 103.2 108 52.8
Sp6g26370 Schrenkiella parvula HOM05D003466 ORTHO05D004102 4.1e-20 103.2 87 64.4
DCAR_012262 Daucus carota HOM05D003466 ORTHO05D004102 5.3e-20 102.8 119 48.7
Dinv13777 Davidia involucrata HOM05D003466 ORTHO05D004102 5.3e-20 102.8 119 49.6
Sabra19G0050200 Salix brachista HOM05D003466 ORTHO05D004102 5.3e-20 102.8 88 62.5
C09p59160 Brassica napus HOM05D003466 ORTHO05D004102 6.9e-20 102.4 84 65.5
BolC9t58759H Brassica oleracea HOM05D003466 ORTHO05D004102 6.9e-20 102.4 84 65.5
CSS0012966 Camellia sinensis var. sinensis HOM05D003466 ORTHO05D004102 6.9e-20 102.4 118 52.5
CSS0029529 Camellia sinensis var. sinensis HOM05D003466 ORTHO05D004102 6.9e-20 102.4 118 52.5
Dinv05554 Davidia involucrata HOM05D003466 ORTHO05D004102 6.9e-20 102.4 119 49.6
DCAR_004345 Daucus carota HOM05D003466 ORTHO05D004102 9.0e-20 102.1 119 47.9
Gohir.A11G229400 Gossypium hirsutum HOM05D003466 ORTHO05D004102 9.0e-20 102.1 116 52.6
Gohir.D11G241400 Gossypium hirsutum HOM05D003466 ORTHO05D004102 9.0e-20 102.1 116 52.6
Gorai.007G255500 Gossypium raimondii HOM05D003466 ORTHO05D004102 9.0e-20 102.1 116 52.6
Lj1C1073T5 Lonicera japonica HOM05D003466 ORTHO05D004102 9.0e-20 102.1 119 49.6
Rhsim09G0189500 Rhododendron simsii HOM05D003466 ORTHO05D004102 9.0e-20 102.1 119 49.6
Sed0007742 Sechium edule HOM05D003466 ORTHO05D004102 9.0e-20 102.1 106 51.9
Actinidia38929 Actinidia chinensis HOM05D003466 ORTHO05D004102 1.2e-19 101.7 119 49.6
MSTRG.8394 Avicennia marina HOM05D003466 ORTHO05D004102 1.2e-19 101.7 87 60.9
Duzib128G1823 Durio zibethinus HOM05D003466 ORTHO05D004102 1.2e-19 101.7 87 59.8
Eucgr.E01598 Eucalyptus grandis HOM05D003466 ORTHO05D004102 1.2e-19 101.7 118 50.0
Nitab4.5_0000368g0060 Nicotiana tabacum HOM05D003466 ORTHO05D004102 1.2e-19 101.7 108 52.8
Nitab4.5_0005883g0020 Nicotiana tabacum HOM05D003466 ORTHO05D004102 1.2e-19 101.7 108 52.8
Dinv25045 Davidia involucrata HOM05D003466 ORTHO05D004102 1.5e-19 101.3 119 48.7
Migut.F01214 Erythranthe guttata HOM05D003466 ORTHO05D004102 1.5e-19 101.3 87 58.6
ClCG04G004740 Citrullus lanatus HOM05D003466 ORTHO05D004102 2.0e-19 100.9 108 50.9
MELO3C008863.2 Cucumis melo HOM05D003466 ORTHO05D004102 2.0e-19 100.9 108 50.9
CsaV3_4G031590 Cucumis sativus L. HOM05D003466 ORTHO05D004102 2.0e-19 100.9 108 50.9
Hma1.2p1_0106F.1_g051170 Hydrangea macrophylla HOM05D003466 ORTHO05D004102 2.0e-19 100.9 108 50.9
Potri.019G039900 Populus trichocarpa HOM05D003466 ORTHO05D004102 2.0e-19 100.9 88 61.4
AT4G08580 Arabidopsis thaliana HOM05D003466 ORTHO05D004102 2.6e-19 100.5 87 62.1
Ciclev10020229m.g Citrus clementina HOM05D003466 ORTHO05D004102 2.6e-19 100.5 119 51.3
Cc00_g13080 Coffea canephora HOM05D003466 ORTHO05D004102 2.6e-19 100.5 109 50.5
Prupe.6G162200 Prunus persica HOM05D003466 ORTHO05D004102 2.6e-19 100.5 108 50.9
TAR623G0841 Trochodendron aralioides HOM05D003466 ORTHO05D004102 2.6e-19 100.5 119 49.6
A10p21590 Brassica napus HOM05D003466 ORTHO05D004102 3.4e-19 100.1 84 64.3
C03p09970 Brassica napus HOM05D003466 ORTHO05D004102 3.4e-19 100.1 84 64.3
BraA03t10180Z Brassica rapa HOM05D003466 ORTHO05D004102 3.4e-19 100.1 84 64.3
BraA10t44221Z Brassica rapa HOM05D003466 ORTHO05D004102 3.4e-19 100.1 84 64.3
Oeu046439.1 Olea europaea HOM05D003466 ORTHO05D004102 3.4e-19 100.1 108 50.9
SalBow7G4471 Salvia bowleyana HOM05D003466 ORTHO05D004102 3.4e-19 100.1 115 51.3
Nn1g00582 Nelumbo nucifera HOM05D003466 ORTHO05D004102 4.5e-19 99.8 119 51.3
Nn1g06321 Nelumbo nucifera HOM05D003466 ORTHO05D004102 4.5e-19 99.8 119 51.3
Solyc01g100500.3 Solanum lycopersicum HOM05D003466 ORTHO05D004102 4.5e-19 99.8 108 50.9
Sopen01g044010 Solanum pennellii HOM05D003466 ORTHO05D004102 4.5e-19 99.8 108 50.9
PGSC0003DMG400002770 Solanum tuberosum HOM05D003466 ORTHO05D004102 4.5e-19 99.8 108 50.9
Carub.0006s1611 Capsella rubella HOM05D003466 ORTHO05D004102 5.9e-19 99.4 86 62.8
Prupe.4G226700 Prunus persica HOM05D003466 ORTHO05D004102 5.9e-19 99.4 108 50.9
PGR142G0405 Punica granatum HOM05D003466 ORTHO05D004102 5.9e-19 99.4 108 50.9
BcaB08g36728 Brassica carinata HOM05D003466 ORTHO05D004102 7.7e-19 99.0 85 64.7
MBI14_g30653_MAGBIO Magnolia biondii HOM05D003466 ORTHO05D004102 1.0e-18 98.6 108 50.0
QL06p022006 Quercus lobata HOM05D003466 ORTHO05D004102 1.0e-18 98.6 108 50.9
AL6G29010 Arabidopsis lyrata HOM05D003466 ORTHO05D004102 1.3e-18 98.2 87 62.1
FAN18G1357 Fragaria x ananassa HOM05D003466 ORTHO05D004102 1.3e-18 98.2 112 48.2
Potri.013G065600 Populus trichocarpa HOM05D003466 ORTHO05D004102 1.3e-18 98.2 113 53.1
TWI34G0391 Tripterygium wilfordii HOM05D003466 ORTHO05D004102 1.3e-18 98.2 116 50.9
Cpa.g.sc2.346 Carica papaya HOM05D003466 ORTHO05D004102 1.7e-18 97.8 87 58.6
ATR0697G059 Amborella trichopoda HOM05D003466 ORTHO05D004102 2.2e-18 97.4 88 58.0
MSTRG.150 Avicennia marina HOM05D003466 ORTHO05D004102 2.2e-18 97.4 115 49.6
FAN13G2307 Fragaria x ananassa HOM05D003466 ORTHO05D004102 2.2e-18 97.4 108 49.1
MD15G1341800 Malus domestica HOM05D003466 ORTHO05D004102 2.2e-18 97.4 103 51.5
RcHm_v2.0_Chr2g0119581 Rosa chinensis HOM05D003466 ORTHO05D004102 2.2e-18 97.4 108 49.1
A03p08540 Brassica napus HOM05D003466 ORTHO05D004102 2.9e-18 97.1 84 63.1
CDE06G0675 Ceratophyllum demersum HOM05D003466 ORTHO05D004102 2.9e-18 97.1 112 47.3
FAN15G1350 Fragaria x ananassa HOM05D003466 ORTHO05D004102 2.9e-18 97.1 108 49.1
MD01G1001200 Malus domestica HOM05D003466 ORTHO05D004102 2.9e-18 97.1 103 52.4
CSS0032791 Camellia sinensis var. sinensis HOM05D003466 ORTHO05D004102 3.8e-18 96.7 105 53.3
CSS0047344 Camellia sinensis var. sinensis HOM05D003466 ORTHO05D004102 3.8e-18 96.7 105 53.3
FvH4_5g26300 Fragaria vesca HOM05D003466 ORTHO05D004102 3.8e-18 96.7 108 49.1
BcaB01g05163 Brassica carinata HOM05D003466 ORTHO05D004102 5.0e-18 96.3 82 63.4
BolC3t13485H Brassica oleracea HOM05D003466 ORTHO05D004102 5.0e-18 96.3 82 63.4
HanXRQChr01g0026931 Helianthus annuus HOM05D003466 ORTHO05D004102 5.0e-18 96.3 87 56.3
Lsat_1_v5_gn_1_55421 Lactuca sativa HOM05D003466 ORTHO05D004102 5.0e-18 96.3 87 59.8
PSO339G1378 Papaver somniferum HOM05D003466 ORTHO05D004102 5.0e-18 96.3 119 47.9
AUR62042249 Chenopodium quinoa HOM05D003466 ORTHO05D004102 6.5e-18 95.9 109 49.5
Haze_21188 Corylus avellana HOM05D003466 ORTHO05D004102 6.5e-18 95.9 112 47.3
Manes.09G136800 Manihot esculenta HOM05D003466 ORTHO05D004102 6.5e-18 95.9 87 58.6
CiPaw.15G127600 Carya illinoinensis HOM05D003466 ORTHO05D004102 8.5e-18 95.5 108 49.1
Haze_22082 Corylus avellana HOM05D003466 ORTHO05D004102 8.5e-18 95.5 108 48.1
Psat7g075240 Pisum sativum HOM05D003466 ORTHO05D004102 8.5e-18 95.5 111 48.6
RcHm_v2.0_Chr7g0222731 Rosa chinensis HOM05D003466 ORTHO05D004102 8.5e-18 95.5 108 48.1
TPR.G11896 Trifolium pratense HOM05D003466 ORTHO05D004102 8.5e-18 95.5 111 48.6
Lj1C1073T4 Lonicera japonica HOM05D003466 ORTHO05D004102 1.1e-17 95.1 89 56.2
HPP92_009864 Vanilla planifolia HOM05D003466 ORTHO05D004102 1.4e-17 94.7 119 47.1
GSVIVG01029154001 Vitis vinifera HOM05D003466 ORTHO05D004102 1.4e-17 94.7 122 46.7
Cfa017016 Carpinus fangiana HOM05D003466 ORTHO05D004102 1.9e-17 94.4 108 47.2
PSO063G0954 Papaver somniferum HOM05D003466 ORTHO05D004102 3.2e-17 93.6 119 46.2
SGA_v2.0_scaffold44G16596 Striga asiatica HOM05D003466 ORTHO05D004102 3.2e-17 93.6 86 58.1
unitig_8.g3898 Utricularia gibba HOM05D003466 ORTHO05D004102 4.2e-17 93.2 113 49.6
Glyma.08G108300 Glycine max HOM05D003466 ORTHO05D004102 5.5e-17 92.8 113 44.2
Medtr8g083140 Medicago truncatula HOM05D003466 ORTHO05D004102 5.5e-17 92.8 121 49.6
AUR62032478 Chenopodium quinoa HOM05D003466 ORTHO05D004102 7.2e-17 92.4 88 56.8
Glyma.05G151500 Glycine max HOM05D003466 ORTHO05D004102 7.2e-17 92.4 112 46.4
LjContig00357g0023779 Lotus japonicus HOM05D003466 ORTHO05D004102 9.4e-17 92.0 115 44.3
Sabra15G0065800 Salix brachista HOM05D003466 ORTHO05D004102 9.4e-17 92.0 93 53.8
arahy.Tifrunner.gnm1.ann1.WPUK1Z Arachis hypogaea HOM05D003466 ORTHO05D004102 1.2e-16 91.7 122 44.3
Phvul.003G051500 Phaseolus vulgaris HOM05D003466 ORTHO05D004102 1.2e-16 91.7 112 45.5
Hund15775 Selenicereus undatus HOM05D003466 ORTHO05D004102 1.2e-16 91.7 88 55.7
arahy.Tifrunner.gnm1.ann1.GMJ520 Arachis hypogaea HOM05D003466 ORTHO05D004102 1.6e-16 91.3 122 44.3
EL10Ac2g02698 Beta vulgaris HOM05D003466 ORTHO05D004102 1.6e-16 91.3 109 48.6
Zm00001eb196610 Zea mays HOM05D003466 ORTHO05D004102 2.7e-16 90.5 108 51.9
Sc10g0003130 Simmondsia chinensis HOM05D003466 ORTHO05D004102 3.6e-16 90.1 109 49.5
VMungo0251G3008 Vigna mungo HOM05D003466 ORTHO05D004102 4.6e-16 89.7 123 43.1
ECA248G3292 Erigeron canadensis HOM05D003466 ORTHO05D004102 7.9e-16 89.0 92 51.1
unitig_22.g5474 Utricularia gibba HOM05D003466 ORTHO05D004102 7.9e-16 89.0 116 49.1
BcaB03g14395 Brassica carinata HOM05D003466 ORTHO05D004102 1.0e-15 88.6 108 46.3
BolC7t42929H Brassica oleracea HOM05D003466 ORTHO05D004102 1.0e-15 88.6 108 46.3
Thhalv10023093m.g Eutrema salsugineum HOM05D003466 ORTHO05D004102 1.0e-15 88.6 87 57.5
C07p24050 Brassica napus HOM05D003466 ORTHO05D004102 1.4e-15 88.2 108 46.3
Peaxi162Scf00673g00432 Petunia axillaris HOM05D003466 ORTHO05D004102 1.4e-15 88.2 109 48.6
Os02g0280100 Oryza sativa ssp. japonica HOM05D003466 ORTHO05D004102 2.3e-15 87.4 109 47.7
Ca_17998_v3 Cicer arietinum L. HOM05D003466 ORTHO05D004102 3.0e-15 87.0 116 44.8
Mapoly0065s0046 Marchantia polymorpha HOM05D003466 ORTHO05D004102 3.9e-15 86.7 94 55.3
QL04p079149 Quercus lobata HOM05D003466 ORTHO05D004102 5.1e-15 86.3 84 54.8
Lalb_Chr12g0205661 Lupinus albus HOM05D003466 ORTHO05D004102 6.7e-15 85.9 111 43.2
FAN15G3298 Fragaria x ananassa HOM05D003466 ORTHO05D004102 8.8e-15 85.5 102 45.1
Lj4g0028177 Lotus japonicus HOM05D003466 ORTHO05D004102 8.8e-15 85.5 75 58.7
Pp3c6_19380 Physcomitrium patens HOM05D003466 ORTHO05D004102 8.8e-15 85.5 95 51.6
BraA07t29363Z Brassica rapa HOM05D003466 ORTHO05D004102 1.1e-14 85.1 102 47.1
Lalb_Chr07g0186841 Lupinus albus HOM05D003466 ORTHO05D004102 1.1e-14 85.1 82 51.2
SEGI_04842 Sequoiadendron giganteum HOM05D003466 ORTHO05D004102 4.3e-14 83.2 120 44.2
A07p16360 Brassica napus HOM05D003466 ORTHO05D004102 5.7e-14 82.8 102 47.1
Aqoxy1G00514 Aquilegia oxysepala HOM05D003466 ORTHO05D004102 1.7e-13 81.3 45 82.2
AagrBONN_evm.TU.Sc2ySwM_362.1620 Anthoceros agrestis HOM05D003466 ORTHO05D004102 2.8e-13 80.5 84 57.1
Ah.12g064750 Amaranthus hybridus HOM05D003466 ORTHO05D004102 1.4e-12 78.2 49 75.5
Ah.12g064760 Amaranthus hybridus HOM05D003466 ORTHO05D004102 1.4e-12 78.2 49 75.5
BcaB08g34851 Brassica carinata HOM05D003466 ORTHO05D004102 2.4e-12 77.4 89 52.8
COL.COLO4_17202 Corchorus olitorius HOM05D003466 ORTHO05D004102 3.1e-12 77.0 101 44.6
SMO364G0903 Selaginella moellendorffii HOM05D003466 ORTHO05D004102 1.5e-11 74.7 120 43.3
CBR_g12232 Chara braunii HOM05D003466 ORTHO05D004102 1.0e-10 72.0 87 51.7
Sp3g32640 Schrenkiella parvula HOM05D003466 ORTHO05D004102 2.5e-09 67.4 114 45.6
RcHm_v2.0_Chr3g0479581 Rosa chinensis HOM05D003466 ORTHO05D004102 2.6e-06 57.4 64 51.6
Cre05.g232950 Chlamydomonas reinhardtii HOM05D003466 ORTHO05D004102 3.3e-06 57.0 72 41.7


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