Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G27260 Arabidopsis lyrata HOM05D003606 ORTHO05D004650 6.0e-184 647.9 400 100.0
AT5G52820 Arabidopsis thaliana HOM05D003606 ORTHO05D004650 1.1e-180 637.1 398 99.0
Carub.0008s1298 Capsella rubella HOM05D003606 ORTHO05D004650 5.1e-175 618.2 402 96.3
Thhalv10013442m.g Eutrema salsugineum HOM05D003606 ORTHO05D004650 6.9e-172 607.8 399 94.0
BcaB05g21983 Brassica carinata HOM05D003606 ORTHO05D004650 9.1e-172 607.4 402 94.0
BcaC03g14497 Brassica carinata HOM05D003606 ORTHO05D004650 1.7e-170 603.2 403 93.3
C02p19350 Brassica napus HOM05D003606 ORTHO05D004650 1.7e-170 603.2 403 93.3
BolC2t08070H Brassica oleracea HOM05D003606 ORTHO05D004650 1.7e-170 603.2 403 93.3
A02p11600 Brassica napus HOM05D003606 ORTHO05D004650 1.4e-169 600.1 403 92.8
BraA02t06222Z Brassica rapa HOM05D003606 ORTHO05D004650 1.4e-169 600.1 403 92.8
Sp6g14980 Schrenkiella parvula HOM05D003606 ORTHO05D004650 2.5e-169 599.4 389 95.4
CARHR265750 Cardamine hirsuta HOM05D003606 ORTHO05D004650 3.3e-166 589.0 400 87.2
Aa31LG3G9060 Aethionema arabicum HOM05D003606 ORTHO05D004650 1.4e-161 573.5 403 90.3
THA.LOC104819092 Tarenaya hassleriana HOM05D003606 ORTHO05D004650 2.1e-152 543.1 404 75.5
BcaB08g35635 Brassica carinata HOM05D003606 ORTHO05D004650 8.8e-151 537.7 403 71.7
Ciclev10015115m.g Citrus clementina HOM05D003606 ORTHO05D004650 4.0e-135 485.7 401 65.1
Atru.chr11.2590 Acer truncatum HOM05D003606 ORTHO05D004650 1.5e-134 483.8 401 78.3
BcaC04g20537 Brassica carinata HOM05D003606 ORTHO05D004650 9.8e-134 481.1 417 65.2
Migut.D00412 Erythranthe guttata HOM05D003606 ORTHO05D004650 9.8e-134 481.1 399 77.7
Cpa.g.sc19.249 Carica papaya HOM05D003606 ORTHO05D004650 3.7e-133 479.2 396 68.9
MELO3C023992.2 Cucumis melo HOM05D003606 ORTHO05D004650 3.7e-133 479.2 402 77.6
CsaV3_3G031990 Cucumis sativus L. HOM05D003606 ORTHO05D004650 3.7e-133 479.2 402 77.6
COL.COLO4_04879 Corchorus olitorius HOM05D003606 ORTHO05D004650 1.1e-132 477.6 396 77.8
CiPaw.05G162700 Carya illinoinensis HOM05D003606 ORTHO05D004650 1.8e-132 476.9 391 78.8
Gohir.D08G163700 Gossypium hirsutum HOM05D003606 ORTHO05D004650 4.1e-132 475.7 404 76.7
Thecc.01G407200 Theobroma cacao HOM05D003606 ORTHO05D004650 4.1e-132 475.7 404 76.2
Gohir.A08G142700 Gossypium hirsutum HOM05D003606 ORTHO05D004650 5.4e-132 475.3 404 76.7
Sabra09G0042600 Salix brachista HOM05D003606 ORTHO05D004650 7.0e-132 474.9 399 72.9
Gorai.004G170600 Gossypium raimondii HOM05D003606 ORTHO05D004650 9.2e-132 474.6 404 76.5
Eucgr.G03357 Eucalyptus grandis HOM05D003606 ORTHO05D004650 1.2e-131 474.2 391 78.3
HanXRQChr16g0524861 Helianthus annuus HOM05D003606 ORTHO05D004650 1.6e-131 473.8 391 79.5
Nn5g28763 Nelumbo nucifera HOM05D003606 ORTHO05D004650 2.0e-131 473.4 394 71.3
PSO675G6796 Papaver somniferum HOM05D003606 ORTHO05D004650 1.3e-130 470.7 398 71.9
Cc02_g29020 Coffea canephora HOM05D003606 ORTHO05D004650 1.7e-130 470.3 390 77.7
Dinv09318 Davidia involucrata HOM05D003606 ORTHO05D004650 1.7e-130 470.3 405 75.6
GSVIVG01032166001 Vitis vinifera HOM05D003606 ORTHO05D004650 1.7e-130 470.3 396 76.5
HanXRQChr17g0563081 Helianthus annuus HOM05D003606 ORTHO05D004650 2.3e-130 469.9 400 71.5
Potri.009G058000 Populus trichocarpa HOM05D003606 ORTHO05D004650 2.3e-130 469.9 399 75.9
Duzib138G0203 Durio zibethinus HOM05D003606 ORTHO05D004650 2.9e-130 469.5 404 75.2
Sc23g0005910 Simmondsia chinensis HOM05D003606 ORTHO05D004650 2.9e-130 469.5 398 75.1
Lj5g0022697 Lotus japonicus HOM05D003606 ORTHO05D004650 6.6e-130 468.4 391 77.5
Actinidia02534 Actinidia chinensis HOM05D000009 ORTHO05D004650 8.6e-130 468.0 407 72.7
Nitab4.5_0001284g0090 Nicotiana tabacum HOM05D003606 ORTHO05D004650 1.9e-129 466.8 392 68.4
Prupe.2G020500 Prunus persica HOM05D003606 ORTHO05D004650 4.3e-129 465.7 402 76.1
TWI32G0899 Tripterygium wilfordii HOM05D003606 ORTHO05D004650 5.6e-129 465.3 403 74.9
CDE02G3858 Ceratophyllum demersum HOM05D003606 ORTHO05D004650 9.5e-129 464.5 391 77.0
AUR62029807 Chenopodium quinoa HOM05D003606 ORTHO05D004650 9.5e-129 464.5 419 63.7
SalBow4G1900 Salvia bowleyana HOM05D003606 ORTHO05D004650 9.5e-129 464.5 409 63.1
MSTRG.2635 Avicennia marina HOM05D003606 ORTHO05D004650 1.2e-128 464.2 399 75.2
CAN.G338.7 Capsicum annuum HOM05D003606 ORTHO05D004650 2.8e-128 463.0 393 74.6
Lj3A990T71 Lonicera japonica HOM05D003606 ORTHO05D004650 2.8e-128 463.0 391 78.0
VMungo0464G1676 Vigna mungo HOM05D003606 ORTHO05D004650 2.8e-128 463.0 391 76.2
Phvul.004G092500 Phaseolus vulgaris HOM05D003606 ORTHO05D004650 3.6e-128 462.6 391 76.7
AUR62023088 Chenopodium quinoa HOM05D003606 ORTHO05D004650 4.7e-128 462.2 419 63.5
Sed0024972 Sechium edule HOM05D003606 ORTHO05D004650 4.7e-128 462.2 391 77.7
Cfa010803 Carpinus fangiana HOM05D003606 ORTHO05D004650 6.1e-128 461.8 396 76.0
Solyc03g112530.3 Solanum lycopersicum HOM05D003606 ORTHO05D004650 6.1e-128 461.8 392 71.2
Sopen03g031590 Solanum pennellii HOM05D003606 ORTHO05D004650 6.1e-128 461.8 392 71.2
CiPaw.05G024300 Carya illinoinensis HOM05D003606 ORTHO05D004650 8.0e-128 461.5 391 78.0
Haze_03155 Corylus avellana HOM05D003606 ORTHO05D004650 8.0e-128 461.5 398 76.1
vmacro13693 Vaccinium macrocarpon HOM05D003606 ORTHO05D004650 8.0e-128 461.5 391 77.7
Ah.10g038660 Amaranthus hybridus HOM05D003606 ORTHO05D004650 1.0e-127 461.1 410 66.1
Dinv43413 Davidia involucrata HOM05D003606 ORTHO05D004650 1.0e-127 461.1 391 77.0
PGSC0003DMG400018107 Solanum tuberosum HOM05D003606 ORTHO05D004650 1.0e-127 461.1 392 71.2
ECA234G3512 Erigeron canadensis HOM05D003606 ORTHO05D004650 1.8e-127 460.3 394 72.3
PSO541G2647 Papaver somniferum HOM05D003606 ORTHO05D004650 1.8e-127 460.3 396 71.0
PGR031G1688 Punica granatum HOM05D003606 ORTHO05D004650 4.0e-127 459.1 389 75.3
Thhalv10025051m.g Eutrema salsugineum HOM05D003606 ORTHO05D004650 6.8e-127 458.4 409 64.8
Manes.10G139000 Manihot esculenta HOM05D003606 ORTHO05D004650 6.8e-127 458.4 399 74.7
Lalb_Chr21g0315701 Lupinus albus HOM05D003606 ORTHO05D004650 1.5e-126 457.2 391 76.0
Glyma.16G165100 Glycine max HOM05D003606 ORTHO05D004650 2.0e-126 456.8 391 75.2
Lsat_1_v5_gn_4_31941 Lactuca sativa HOM05D003606 ORTHO05D004650 7.5e-126 454.9 391 77.7
TWI34G0860 Tripterygium wilfordii HOM05D003606 ORTHO05D004650 2.9e-125 453.0 401 74.3
Aqoxy2G00153 Aquilegia oxysepala HOM05D003606 ORTHO05D004650 3.7e-125 452.6 389 77.6
BolC7t45366H Brassica oleracea HOM05D003606 ORTHO05D004650 4.9e-125 452.2 395 66.1
Glyma.02G080600 Glycine max HOM05D003606 ORTHO05D004650 4.9e-125 452.2 389 75.8
Rhsim07G0058400 Rhododendron simsii HOM05D003606 ORTHO05D004650 4.9e-125 452.2 391 77.0
RcHm_v2.0_Chr1g0317321 Rosa chinensis HOM05D003606 ORTHO05D004650 6.4e-125 451.8 401 66.8
MD17G1287700 Malus domestica HOM05D003606 ORTHO05D004650 1.1e-124 451.1 401 75.6
SGA_v2.0_scaffold1G00601 Striga asiatica HOM05D003606 ORTHO05D004650 1.8e-124 450.3 385 76.9
FvH4_7g01500 Fragaria vesca HOM05D003606 ORTHO05D004650 4.6e-123 445.7 402 65.9
BcaC06g33533 Brassica carinata HOM05D003606 ORTHO05D004650 1.3e-122 444.1 418 62.7
DCAR_003761 Daucus carota HOM05D003606 ORTHO05D004650 1.3e-122 444.1 399 74.2
Ca_19553_v3 Cicer arietinum L. HOM05D003606 ORTHO05D004650 2.3e-122 443.4 389 65.8
FAN06G2132 Fragaria x ananassa HOM05D003606 ORTHO05D004650 2.3e-122 443.4 402 60.9
TPR.G14490 Trifolium pratense HOM05D003606 ORTHO05D004650 2.3e-122 443.4 406 64.3
FAN01G0800 Fragaria x ananassa HOM05D003606 ORTHO05D004650 3.0e-122 443.0 394 66.8
FAN03G2659 Fragaria x ananassa HOM05D003606 ORTHO05D004650 3.0e-122 443.0 394 66.8
MD02G1305600 Malus domestica HOM05D003606 ORTHO05D004650 3.0e-122 443.0 393 68.7
ClCG10G012220 Citrullus lanatus HOM05D003606 ORTHO05D004650 3.9e-122 442.6 417 70.3
Medtr1g054300 Medicago truncatula HOM05D003606 ORTHO05D004650 5.0e-122 442.2 389 65.8
FAN10G3084 Fragaria x ananassa HOM05D003606 ORTHO05D004650 6.6e-122 441.8 394 66.5
Psat6g110240 Pisum sativum HOM05D003606 ORTHO05D004650 5.6e-121 438.7 391 65.0
SGA_v2.0_scaffold138G35254 Striga asiatica HOM05D003606 ORTHO05D004650 5.6e-121 438.7 390 72.8
BcaNung04849 Brassica carinata HOM05D003606 ORTHO05D004650 1.4e-119 434.1 402 63.7
BolC9t59770H Brassica oleracea HOM05D003606 ORTHO05D004650 1.4e-119 434.1 402 63.7
C07p48580 Brassica napus HOM05D003606 ORTHO05D004650 2.3e-119 433.3 429 60.6
Os11g0594200 Oryza sativa ssp. japonica HOM05D003606 ORTHO05D004650 2.3e-119 433.3 390 72.6
C09p70260 Brassica napus HOM05D003606 ORTHO05D004650 2.0e-118 430.3 405 63.2
ATR0626G036 Amborella trichopoda HOM05D003606 ORTHO05D004650 1.7e-117 427.2 397 59.7
BcaNung04664 Brassica carinata HOM05D003606 ORTHO05D004650 1.4e-116 424.1 399 61.4
Zm00001eb297740 Zea mays HOM05D003606 ORTHO05D004650 1.9e-116 423.7 388 72.7
Os10g0104500 Oryza sativa ssp. japonica HOM05D003606 ORTHO05D004650 4.1e-116 422.5 396 71.0
Nitab4.5_0012005g0010 Nicotiana tabacum HOM05D003606 ORTHO05D004650 7.0e-116 421.8 392 63.8
Peaxi162Scf00089g01530 Petunia axillaris HOM05D003606 ORTHO05D004650 2.3e-114 416.8 392 71.9
SEGI_00890 Sequoiadendron giganteum HOM05D003606 ORTHO05D004650 9.5e-113 411.4 392 64.0
TAR633G2243 Trochodendron aralioides HOM05D003606 ORTHO05D004650 2.8e-112 409.8 521 56.4
Hund21610 Selenicereus undatus HOM05D003606 ORTHO05D004650 6.2e-112 408.7 426 58.7
arahy.Tifrunner.gnm1.ann1.F9F3MK Arachis hypogaea HOM05D003606 ORTHO05D004650 6.8e-111 405.2 398 70.6
arahy.Tifrunner.gnm1.ann1.GAUK41 Arachis hypogaea HOM05D003606 ORTHO05D004650 1.2e-110 404.4 398 70.4
arahy.Tifrunner.gnm1.ann1.V59V4E Arachis hypogaea HOM05D003606 ORTHO05D004650 5.8e-110 402.1 398 69.6
QL06p005538 Quercus lobata HOM05D003606 ORTHO05D004650 1.3e-109 401.0 351 76.4
SHI00285 Sapria himalayana HOM05D003606 ORTHO05D004650 3.7e-109 399.4 430 56.3
Oeu025828.1 Olea europaea HOM05D003606 ORTHO05D004650 4.9e-109 399.1 524 55.2
A10p29890 Brassica napus HOM05D003606 ORTHO05D004650 6.4e-109 398.7 402 59.5
Manes.07G008500 Manihot esculenta HOM05D003606 ORTHO05D004650 1.1e-108 397.9 399 68.7
AagrBONN_evm.TU.Sc2ySwM_344.4930 Anthoceros agrestis HOM05D003606 ORTHO05D004650 1.9e-105 387.1 400 63.2
CANSAT01G2566 Cannabis sativa HOM05D003606 ORTHO05D004650 2.5e-105 386.7 399 65.2
arahy.Tifrunner.gnm1.ann1.ZXEF1Z Arachis hypogaea HOM05D003606 ORTHO05D004650 4.3e-105 386.0 398 60.6
Pp3c1_35350 Physcomitrium patens HOM05D003606 ORTHO05D004650 2.0e-102 377.1 389 64.3
Mapoly0082s0085 Marchantia polymorpha HOM05D003606 ORTHO05D004650 3.2e-100 369.8 389 63.2
unitig_26.g10141 Utricularia gibba HOM05D003606 ORTHO05D004650 3.9e-98 362.8 418 54.5
PSO541G4704 Papaver somniferum HOM05D003606 ORTHO05D004650 1.9e-97 360.5 372 56.7
CBR_g38286 Chara braunii HOM05D003606 ORTHO05D004650 9.6e-97 358.2 393 53.2
SMO259G0032 Selaginella moellendorffii HOM05D003606 ORTHO05D004650 2.1e-96 357.1 407 54.5
HPP92_026819 Vanilla planifolia HOM05D003606 ORTHO05D004650 1.8e-95 354.0 444 45.5
SGA_v2.0_scaffold90G27689 Striga asiatica HOM05D003606 ORTHO05D004650 1.0e-90 338.2 314 77.4
BcaC06g32566 Brassica carinata HOM05D003606 ORTHO05D004650 7.3e-89 332.0 395 51.1
AUR62009405 Chenopodium quinoa HOM05D003606 ORTHO05D004650 1.6e-88 330.9 296 72.6
BraA10t43107Z Brassica rapa HOM05D003606 ORTHO05D004650 7.6e-86 322.0 248 73.8
BcaNung05838 Brassica carinata HOM05D003606 ORTHO05D004650 1.3e-85 321.2 386 49.2
A10p10270 Brassica napus HOM05D003606 ORTHO05D004650 1.1e-84 318.2 248 73.4
MD09G1280600 Malus domestica HOM05D003606 ORTHO05D004650 4.6e-83 312.8 315 62.5
BraA10t45027Z Brassica rapa HOM05D003606 ORTHO05D004650 1.8e-82 310.8 249 72.3
MCO05G213 Micromonas commoda HOM05D003606 ORTHO05D004650 3.0e-82 310.1 387 47.3
TPR.G7603 Trifolium pratense HOM05D003606 ORTHO05D004650 2.4e-79 300.4 335 55.8
Hund00228 Selenicereus undatus HOM05D003606 ORTHO05D004650 1.8e-74 284.3 373 47.2
PRCOL_00003575 Prasinoderma coloniale HOM05D003606 ORTHO05D004650 3.2e-68 263.5 419 43.7
Haze_26363 Corylus avellana HOM05D003606 ORTHO05D004650 4.8e-64 249.6 398 39.2
Ca_22822_v3 Cicer arietinum L. HOM05D003606 ORTHO05D000002 2.0e-62 244.2 198 59.1
COL.COLO4_04880 Corchorus olitorius HOM05D003606 ORTHO05D004650 6.1e-59 232.6 293 65.9
Cre01.g000600 Chlamydomonas reinhardtii HOM05D003606 ORTHO05D004650 4.3e-57 226.5 396 43.9
BolC9t57121H Brassica oleracea HOM05D003606 ORTHO05D004650 3.7e-56 223.4 295 45.1
C09p42410 Brassica napus HOM05D003606 ORTHO05D004650 8.2e-56 222.2 299 44.8
HanXRQChr15g0491881 Helianthus annuus HOM05D003606 ORTHO05D004650 1.4e-55 221.5 191 59.2
Sc03g0002540 Simmondsia chinensis HOM05D003606 ORTHO05D004650 1.0e-42 178.7 125 67.2
CSS0037178 Camellia sinensis var. sinensis HOM05D003606 ORTHO05D004650 1.4e-42 178.3 102 79.4
AUR62034729 Chenopodium quinoa HOM05D003606 ORTHO05D004650 3.7e-40 170.2 102 74.5
CSS0009389 Camellia sinensis var. sinensis HOM05D003606 ORTHO05D004650 4.5e-38 163.3 133 60.2
Manes.07G009860 Manihot esculenta HOM05D003606 ORTHO05D004650 1.1e-36 158.7 85 81.2
BcaC06g33525 Brassica carinata HOM05D003606 ORTHO05D004650 5.5e-36 156.4 103 70.9
Cfa026891 Carpinus fangiana HOM05D003606 ORTHO05D004650 8.8e-34 149.1 371 34.2
BolC9t57120H Brassica oleracea HOM05D003606 ORTHO05D033191 8.3e-32 142.5 90 81.1
BraA10t45028Z Brassica rapa HOM05D003606 ORTHO05D004650 1.8e-31 141.4 94 73.4
BcaNung04851 Brassica carinata HOM05D003606 ORTHO05D004650 2.7e-30 137.5 106 67.9
Oeu060950.1 Olea europaea HOM05D003606 ORTHO05D016710 1.3e-29 135.2 181 40.3
TAR636G3369 Trochodendron aralioides HOM05D003606 ORTHO05D003127 1.4e-26 125.2 151 47.7
C09p42400 Brassica napus HOM05D003606 ORTHO05D033191 3.0e-26 124.0 79 78.5
SalBow4G2833 Salvia bowleyana HOM05D003606 ORTHO05D004650 5.7e-25 119.8 294 35.4
Medtr0421s0030 Medicago truncatula HOM05D003606 ORTHO05D004650 7.0e-23 112.8 86 64.0
BcaC01g02187 Brassica carinata HOM05D003606 ORTHO05D016710 2.0e-22 111.3 120 65.0
MD09G1280700 Malus domestica HOM05D003606 ORTHO05D004650 2.0e-22 111.3 77 67.5
CSS0038697 Camellia sinensis var. sinensis HOM05D003606 ORTHO05D016710 7.7e-22 109.4 56 80.4
C02p14020 Brassica napus HOM05D003606 ORTHO05D016710 8.0e-19 99.4 164 35.4
SMO259G0025 Selaginella moellendorffii HOM05D003606 ORTHO05D004650 5.2e-18 96.7 50 76.0
TPR.G39665 Trifolium pratense HOM05D003606 ORTHO05D033191 9.8e-17 92.4 65 61.5
GSVIVG01032170001 Vitis vinifera HOM05D003606 ORTHO05D004650 2.7e-14 84.3 60 61.7
QL06p005531 Quercus lobata HOM05D011240 ORTHO05D014254 3.9e-13 80.5 41 80.5
COL.COLO4_24393 Corchorus olitorius HOM05D003606 ORTHO05D004650 1.1e-12 79.0 42 76.2
TAR636G2756 Trochodendron aralioides HOM05D003606 ORTHO05D004650 2.5e-12 77.8 40 80.0
Hund00229 Selenicereus undatus HOM05D003606 ORTHO05D004650 4.3e-12 77.0 40 77.5
Eucgr.G03346 Eucalyptus grandis HOM05D003606 ORTHO05D004650 5.6e-12 76.6 42 73.8
BolC2t07520H Brassica oleracea HOM05D003606 ORTHO05D016710 1.2e-11 75.5 47 66.0
CSS0009074 Camellia sinensis var. sinensis HOM05D003606 ORTHO05D043277 4.7e-11 73.6 40 80.0
CSS0037126 Camellia sinensis var. sinensis HOM05D003606 ORTHO05D043277 4.7e-11 73.6 40 80.0
Oeu060951.1 Olea europaea HOM05D003606 ORTHO05D004650 9.8e-09 65.9 36 75.0
Eucgr.G03354 Eucalyptus grandis HOM05D003606 ORTHO05D004650 1.7e-08 65.1 42 64.3
TPR.G8471 Trifolium pratense HOM05D003606 ORTHO05D004650 2.9e-08 64.3 40 65.0
C03p42670 Brassica napus HOM05D003606 ORTHO05D016710 8.3e-08 62.8 140 31.4
C03p67300 Brassica napus HOM05D003606 ORTHO05D016710 8.3e-08 62.8 140 31.4
BolSC21t60295H Brassica oleracea HOM05D003606 ORTHO05D016710 8.3e-08 62.8 140 31.4
Actinidia18910 Actinidia chinensis HOM05D002288 ORTHO05D002894 1.2e-06 58.9 79 36.7
BolC2t06237H Brassica oleracea HOM05D003606 ORTHO05D016710 1.6e-06 58.5 140 32.1
TWI12G0929 Tripterygium wilfordii HOM05D000836 ORTHO05D000709 1.6e-06 58.5 71 43.7
THA.LOC104821238 Tarenaya hassleriana HOM05D002634 ORTHO05D003100 2.7e-06 57.8 69 42.0
Mapoly0035s0097 Marchantia polymorpha HOM05D002943 ORTHO05D002685 3.5e-06 57.4 58 46.6
Nn4g24508 Nelumbo nucifera HOM05D002288 ORTHO05D002894 4.6e-06 57.0 79 35.4
Pp3c14_5700 Physcomitrium patens HOM05D009278 ORTHO05D002685 4.6e-06 57.0 41 56.1


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