Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G27020 Arabidopsis lyrata HOM05D002831 ORTHO05D004341 9.9e-163 577.0 358 100.0
AT5G52550 Arabidopsis thaliana HOM05D002831 ORTHO05D004341 1.0e-130 470.7 365 86.6
Carub.0008s1268 Capsella rubella HOM05D002831 ORTHO05D004341 1.6e-72 277.3 362 56.6
BraA02t06237Z Brassica rapa HOM05D002831 ORTHO05D004341 5.6e-65 252.3 365 51.5
BNapus_Darmor_BZH_scaffold_232p00070 Brassica napus HOM05D002831 ORTHO05D004341 1.6e-64 250.8 364 50.8
A02p11720 Brassica napus HOM05D002831 ORTHO05D004341 5.8e-62 242.3 364 50.5
Aa31LG3G8920 Aethionema arabicum HOM05D002831 ORTHO05D004341 7.3e-57 225.3 354 46.9
A01p16930 Brassica napus HOM05D002831 ORTHO05D004341 4.0e-55 219.5 290 54.1
BcaB05g21966 Brassica carinata HOM05D002831 ORTHO05D004341 1.0e-50 204.9 284 55.6
C01p21210 Brassica napus HOM05D002831 ORTHO05D004341 4.8e-48 196.1 290 51.4
BcaC03g14518 Brassica carinata HOM05D002831 ORTHO05D004341 1.4e-47 194.5 318 47.8
Sp7g23710 Schrenkiella parvula HOM05D002831 ORTHO05D004341 3.2e-44 183.3 187 61.0
AL7G27410 Arabidopsis lyrata HOM05D002831 ORTHO05D004341 3.5e-43 179.9 188 60.6
AT4G25670 Arabidopsis thaliana HOM05D002831 ORTHO05D004341 7.9e-43 178.7 189 60.3
Thhalv10027473m.g Eutrema salsugineum HOM05D002831 ORTHO05D004341 7.9e-43 178.7 187 60.4
CARHR233110 Cardamine hirsuta HOM05D002831 ORTHO05D004341 2.3e-42 177.2 188 60.6
Carub.0007s1530 Capsella rubella HOM05D002831 ORTHO05D004341 3.0e-42 176.8 190 61.1
THA.LOC104800271 Tarenaya hassleriana HOM05D002831 ORTHO05D004341 6.7e-42 175.6 375 41.9
AT4G25690 Arabidopsis thaliana HOM05D002831 ORTHO05D004341 1.1e-41 174.9 184 60.9
BraA01t01645Z Brassica rapa HOM05D002831 ORTHO05D004341 1.9e-41 174.1 187 59.9
AL7G27390 Arabidopsis lyrata HOM05D002831 ORTHO05D004341 2.5e-41 173.7 185 60.0
Sp7g23730 Schrenkiella parvula HOM05D002831 ORTHO05D004341 2.5e-41 173.7 185 61.1
Thhalv10026278m.g Eutrema salsugineum HOM05D002831 ORTHO05D004341 1.3e-40 171.4 185 60.5
BolC1t02046H Brassica oleracea HOM05D002831 ORTHO05D004341 2.1e-40 170.6 198 57.1
Lj1P1004T73 Lonicera japonica HOM05D002831 ORTHO05D004341 8.1e-40 168.7 203 54.2
BcaNung07307 Brassica carinata HOM05D002831 ORTHO05D004341 1.4e-39 167.9 181 60.8
BraA01t01648Z Brassica rapa HOM05D002831 ORTHO05D004341 2.4e-39 167.2 188 59.0
TWI39G0102 Tripterygium wilfordii HOM05D002831 ORTHO05D004341 4.0e-39 166.4 195 52.8
CSS0004722 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D004341 2.6e-38 163.7 197 52.3
CSS0021117 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D004341 2.6e-38 163.7 197 52.3
TWI23G0387 Tripterygium wilfordii HOM05D002831 ORTHO05D004341 3.4e-38 163.3 203 50.7
Duzib084G1013 Durio zibethinus HOM05D002831 ORTHO05D004341 2.4e-36 157.1 194 52.1
DCAR_020268 Daucus carota HOM05D002831 ORTHO05D004341 4.2e-36 156.4 202 48.0
THA.LOC104811959 Tarenaya hassleriana HOM05D002831 ORTHO05D004341 2.7e-35 153.7 376 37.5
TWI14G0525 Tripterygium wilfordii HOM05D002831 ORTHO05D004341 4.6e-35 152.9 192 50.0
BcaC06g32789 Brassica carinata HOM05D002831 ORTHO05D004341 7.9e-35 152.1 200 54.0
Dinv28390 Davidia involucrata HOM05D002831 ORTHO05D004341 1.8e-34 151.0 202 48.0
Dinv35249 Davidia involucrata HOM05D002831 ORTHO05D004341 1.8e-34 151.0 200 50.0
Thecc.03G183700 Theobroma cacao HOM05D002831 ORTHO05D004341 2.3e-34 150.6 201 50.7
CARHR265540 Cardamine hirsuta HOM05D002831 ORTHO05D004341 5.1e-34 149.4 351 39.6
Eucgr.A02748 Eucalyptus grandis HOM05D002831 ORTHO05D004341 1.1e-33 148.3 193 50.8
PSO478G4817 Papaver somniferum HOM05D002831 ORTHO05D004341 1.1e-33 148.3 190 50.5
CARHR233150 Cardamine hirsuta HOM05D002831 ORTHO05D004341 1.5e-33 147.9 181 56.4
Cpa.g.sc107.104 Carica papaya HOM05D002831 ORTHO05D004341 1.5e-33 147.9 197 49.7
Actinidia08576 Actinidia chinensis HOM05D002831 ORTHO05D004341 2.5e-33 147.1 196 48.5
COL.COLO4_10060 Corchorus olitorius HOM05D002831 ORTHO05D004341 2.5e-33 147.1 202 50.0
Duzib068G1050 Durio zibethinus HOM05D002831 ORTHO05D004341 2.5e-33 147.1 200 49.5
TAR374G0609 Trochodendron aralioides HOM05D002831 ORTHO05D004341 2.5e-33 147.1 194 47.9
Actinidia34155 Actinidia chinensis HOM05D002831 ORTHO05D004341 3.3e-33 146.7 202 48.5
DCAR_009393 Daucus carota HOM05D002831 ORTHO05D004341 4.3e-33 146.4 198 49.5
Ciclev10005857m.g Citrus clementina HOM05D002831 ORTHO05D004341 7.4e-33 145.6 197 49.2
Oeu060465.1 Olea europaea HOM05D002831 ORTHO05D004341 7.4e-33 145.6 195 49.2
PSO782G2858 Papaver somniferum HOM05D002831 ORTHO05D004341 7.4e-33 145.6 191 50.3
Peaxi162Scf00444g00016 Petunia axillaris HOM05D002831 ORTHO05D004341 7.4e-33 145.6 198 48.5
CSS0012099 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D004341 4.8e-32 142.9 203 46.3
CSS0034926 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D004341 4.8e-32 142.9 203 46.3
Nitab4.5_0000084g0400 Nicotiana tabacum HOM05D002831 ORTHO05D004341 6.2e-32 142.5 207 46.4
Rhsim09G0200400 Rhododendron simsii HOM05D002831 ORTHO05D004341 8.2e-32 142.1 191 47.6
Peaxi162Scf00618g00748 Petunia axillaris HOM05D001680 ORTHO05D004341 1.1e-31 141.7 197 46.2
BolC1t02049H Brassica oleracea HOM05D002831 ORTHO05D004341 1.4e-31 141.4 188 53.2
Gorai.006G199200 Gossypium raimondii HOM05D002831 ORTHO05D004341 4.0e-31 139.8 199 49.7
CAN.G126.12 Capsicum annuum HOM05D002831 ORTHO05D004341 5.3e-31 139.4 199 46.7
Atru.chr1.379 Acer truncatum HOM05D002831 ORTHO05D004341 6.9e-31 139.0 199 47.2
Atru.ctg97_1.16 Acer truncatum HOM05D002831 ORTHO05D004341 6.9e-31 139.0 199 47.2
Gohir.A09G182600 Gossypium hirsutum HOM05D002831 ORTHO05D004341 6.9e-31 139.0 200 49.5
Gohir.D09G177200 Gossypium hirsutum HOM05D002831 ORTHO05D004341 6.9e-31 139.0 199 49.7
Nitab4.5_0003825g0080 Nicotiana tabacum HOM05D002831 ORTHO05D004341 1.5e-30 137.9 196 46.9
PGSC0003DMG400028898 Solanum tuberosum HOM05D002831 ORTHO05D004341 2.0e-30 137.5 197 46.2
Sopen06g012030 Solanum pennellii HOM05D002831 ORTHO05D004341 2.6e-30 137.1 197 46.2
Cc02_g02420 Coffea canephora HOM05D002831 ORTHO05D004341 3.4e-30 136.7 202 45.5
Potri.017G143215 Populus trichocarpa HOM05D002831 ORTHO05D004341 4.5e-30 136.3 198 46.0
Nitab4.5_0000572g0140 Nicotiana tabacum HOM05D002831 ORTHO05D004341 5.8e-30 136.0 199 45.2
Sabra04G0053100 Salix brachista HOM05D002831 ORTHO05D004341 1.0e-29 135.2 196 45.4
Potri.004G079900 Populus trichocarpa HOM05D002831 ORTHO05D004341 1.3e-29 134.8 196 44.9
Oeu036905.1 Olea europaea HOM05D002831 ORTHO05D004341 2.2e-29 134.0 212 44.8
Duzib205G1365 Durio zibethinus HOM05D002831 ORTHO05D004341 2.9e-29 133.7 191 47.6
vmacro06629 Vaccinium macrocarpon HOM05D002831 ORTHO05D004341 1.4e-28 131.3 197 45.7
AUR62021127 Chenopodium quinoa HOM05D002831 ORTHO05D004341 2.5e-28 130.6 199 48.2
Sopen03g003930 Solanum pennellii HOM05D002831 ORTHO05D004341 4.2e-28 129.8 194 46.4
AUR62031417 Chenopodium quinoa HOM05D002831 ORTHO05D004341 7.1e-28 129.0 199 47.7
Aqoxy7G00243 Aquilegia oxysepala HOM05D002831 ORTHO05D004341 9.3e-28 128.6 198 44.9
Solyc06g036250.2 Solanum lycopersicum HOM05D002831 ORTHO05D004341 1.2e-27 128.3 186 45.7
Gorai.004G117400 Gossypium raimondii HOM05D002831 ORTHO05D004341 1.6e-27 127.9 174 49.4
Actinidia31838 Actinidia chinensis HOM05D002831 ORTHO05D004341 2.7e-27 127.1 205 46.3
Sabra17G0120100 Salix brachista HOM05D002831 ORTHO05D004341 2.7e-27 127.1 196 43.9
ATR0661G020 Amborella trichopoda HOM05D002831 ORTHO05D004341 3.5e-27 126.7 133 56.4
PGR042G3073 Punica granatum HOM05D002831 ORTHO05D004341 4.6e-27 126.3 202 45.0
Gohir.D08G109800 Gossypium hirsutum HOM05D002831 ORTHO05D004341 6.0e-27 125.9 174 48.9
Rhsim03G0190700 Rhododendron simsii HOM05D002831 ORTHO05D004341 6.0e-27 125.9 197 44.7
Migut.F00296 Erythranthe guttata HOM05D002831 ORTHO05D004341 1.8e-26 124.4 187 44.4
Gohir.A08G098200 Gossypium hirsutum HOM05D002831 ORTHO05D004341 1.8e-26 124.4 174 48.3
Gohir.D12G256900 Gossypium hirsutum HOM05D002831 ORTHO05D004341 1.8e-26 124.4 200 45.0
Gorai.008G275100 Gossypium raimondii HOM05D002831 ORTHO05D004341 1.8e-26 124.4 200 45.0
Oeu045362.1 Olea europaea HOM05D002831 ORTHO05D004341 1.8e-26 124.4 202 43.1
Ah.13g069150 Amaranthus hybridus HOM05D002831 ORTHO05D004341 3.0e-26 123.6 184 48.4
Ah.07g206590 Amaranthus hybridus HOM05D002831 ORTHO05D004341 3.9e-26 123.2 185 47.6
Gohir.A12G255500 Gossypium hirsutum HOM05D002831 ORTHO05D004341 5.1e-26 122.9 200 45.0
Nitab4.5_0000248g0010 Nicotiana tabacum HOM05D002831 ORTHO05D004341 8.7e-26 122.1 181 45.9
SalBow4G1512 Salvia bowleyana HOM05D002831 ORTHO05D004341 8.7e-26 122.1 203 43.8
MSTRG.27090 Avicennia marina HOM05D002831 ORTHO05D004341 1.1e-25 121.7 194 44.3
PGSC0003DMG400010167 Solanum tuberosum HOM05D002831 ORTHO05D004341 1.1e-25 121.7 184 46.2
Gohir.D11G011100 Gossypium hirsutum HOM05D002831 ORTHO05D004341 1.3e-24 118.2 193 46.6
Gorai.007G012600 Gossypium raimondii HOM05D002831 ORTHO05D004341 1.6e-24 117.9 193 46.6
Hma1.2p1_0274F.1_g110180 Hydrangea macrophylla HOM05D002831 ORTHO05D004341 2.2e-24 117.5 201 42.3
Lalb_Chr02g0141231 Lupinus albus HOM05D002831 ORTHO05D004341 4.8e-24 116.3 176 46.0
Gohir.A11G011900 Gossypium hirsutum HOM05D002831 ORTHO05D004341 6.3e-24 115.9 193 46.1
EL10Ac3g05428 Beta vulgaris HOM05D002831 ORTHO05D004341 1.8e-23 114.4 191 45.0
SGA_v2.0_scaffold10G05296 Striga asiatica HOM05D002831 ORTHO05D004341 5.3e-23 112.8 199 42.7
MSTRG.74 Avicennia marina HOM05D002831 ORTHO05D004341 1.5e-22 111.3 195 41.0
C07p54490 Brassica napus HOM05D000048 ORTHO05D000445 1.5e-22 111.3 99 66.7
BolC2t08091H Brassica oleracea HOM05D002831 ORTHO05D004341 1.5e-22 111.3 121 67.8
BolC7t45934H Brassica oleracea HOM05D000048 ORTHO05D000445 1.5e-22 111.3 99 66.7
Glyma.09G132500 Glycine max HOM05D002831 ORTHO05D004341 1.5e-22 111.3 188 46.8
unitig_0.g2470 Utricularia gibba HOM05D002831 ORTHO05D004341 3.4e-22 110.2 184 45.1
Manes.14G023000 Manihot esculenta HOM05D002831 ORTHO05D004341 4.5e-22 109.8 208 40.9
HPP92_022210 Vanilla planifolia HOM05D002831 ORTHO05D004341 1.7e-21 107.8 188 42.6
HPP92_022228 Vanilla planifolia HOM05D002831 ORTHO05D004341 1.7e-21 107.8 188 43.1
Sc19g0001290 Simmondsia chinensis HOM05D002831 ORTHO05D004341 3.8e-21 106.7 183 42.1
TPR.G7753 Trifolium pratense HOM05D002831 ORTHO05D004341 3.8e-21 106.7 187 43.9
vmacro09817 Vaccinium macrocarpon HOM05D002831 ORTHO05D004341 3.8e-21 106.7 106 55.7
Manes.06G152100 Manihot esculenta HOM05D002831 ORTHO05D004341 5.0e-21 106.3 197 41.1
Migut.F01087 Erythranthe guttata HOM05D002831 ORTHO05D004341 6.5e-21 105.9 171 45.6
GSVIVG01028866001 Vitis vinifera HOM05D002831 ORTHO05D010484 2.5e-20 104.0 183 43.7
Glyma.20G162500 Glycine max HOM05D002831 ORTHO05D004341 4.2e-20 103.2 183 42.1
SGA_v2.0_scaffold113G31691 Striga asiatica HOM05D002831 ORTHO05D008967 4.2e-20 103.2 192 42.7
HPP92_022231 Vanilla planifolia HOM05D002831 ORTHO05D004341 5.5e-20 102.8 115 54.8
CiPaw.06G003300 Carya illinoinensis HOM05D002831 ORTHO05D004341 7.2e-20 102.4 202 39.6
CAN.G204.16 Capsicum annuum HOM05D002831 ORTHO05D004341 1.2e-19 101.7 170 45.9
Cfa016283 Carpinus fangiana HOM05D002831 ORTHO05D004341 1.6e-19 101.3 197 39.6
Psat6g196360 Pisum sativum HOM05D002831 ORTHO05D004341 2.1e-19 100.9 188 42.0
Glyma.10G231300 Glycine max HOM05D002831 ORTHO05D004341 3.6e-19 100.1 185 42.2
Lj5g0008853 Lotus japonicus HOM05D002831 ORTHO05D004341 3.6e-19 100.1 186 41.4
CiPaw.06G003100 Carya illinoinensis HOM05D002831 ORTHO05D004341 4.6e-19 99.8 202 38.6
unitig_37.g11969 Utricularia gibba HOM05D002831 ORTHO05D004341 4.6e-19 99.8 186 44.6
TPR.G21560 Trifolium pratense HOM05D002831 ORTHO05D004341 6.1e-19 99.4 184 41.8
arahy.Tifrunner.gnm1.ann1.VWVY78 Arachis hypogaea HOM05D002831 ORTHO05D010484 7.9e-19 99.0 194 39.2
CANSAT11G0421 Cannabis sativa HOM05D002831 ORTHO05D004341 1.0e-18 98.6 199 39.2
SGA_v2.0_scaffold60G21104 Striga asiatica HOM05D002831 ORTHO05D004341 1.0e-18 98.6 212 39.6
HPP92_008924 Vanilla planifolia HOM05D002831 ORTHO05D004341 3.0e-18 97.1 173 42.8
Ca_10728_v3 Cicer arietinum L. HOM05D002831 ORTHO05D004341 5.1e-18 96.3 180 40.6
Prupe.2G300400 Prunus persica HOM05D002831 ORTHO05D004341 8.8e-18 95.5 198 38.4
Haze_00039 Corylus avellana HOM05D002831 ORTHO05D004341 4.3e-17 93.2 145 43.4
Glyma.16G179300 Glycine max HOM05D002831 ORTHO05D004341 7.4e-17 92.4 198 38.9
QL09p012962 Quercus lobata HOM05D002831 ORTHO05D004341 7.4e-17 92.4 203 38.4
Lalb_Chr03g0034811 Lupinus albus HOM05D002831 ORTHO05D004341 9.7e-17 92.0 189 39.7
BraA03t14689Z Brassica rapa HOM05D000048 ORTHO05D000445 2.2e-16 90.9 111 54.1
Lalb_Chr06g0161301 Lupinus albus HOM05D002831 ORTHO05D004341 2.8e-16 90.5 183 39.9
TAR375G0840 Trochodendron aralioides HOM05D002831 ORTHO05D004341 2.8e-16 90.5 196 36.7
CiPaw.12G018300 Carya illinoinensis HOM05D002831 ORTHO05D004341 1.1e-15 88.6 190 39.5
VMungo0464G0591 Vigna mungo HOM05D002831 ORTHO05D004341 6.9e-15 85.9 192 37.5
RcHm_v2.0_Chr1g0378241 Rosa chinensis HOM05D002831 ORTHO05D004341 9.1e-15 85.5 199 36.7
Phvul.004G109000 Phaseolus vulgaris HOM05D002831 ORTHO05D004341 1.2e-14 85.1 198 36.9
Lalb_Chr21g0305221 Lupinus albus HOM05D002831 ORTHO05D004341 3.4e-14 83.6 144 42.4
Carub.0007s1527 Capsella rubella HOM05D002831 ORTHO05D004341 4.5e-14 83.2 61 77.0
MD07G1278500 Malus domestica HOM05D002831 ORTHO05D004341 4.5e-14 83.2 200 38.0
MD01G1207900 Malus domestica HOM05D002831 ORTHO05D004341 2.9e-13 80.5 200 35.0
FvH4_7g30190 Fragaria vesca HOM05D002831 ORTHO05D004341 3.8e-13 80.1 200 37.0
FAN06G3328 Fragaria x ananassa HOM05D002831 ORTHO05D004341 3.8e-13 80.1 200 37.0
VMungo0720G1018 Vigna mungo HOM05D002831 ORTHO05D004341 6.5e-13 79.3 186 37.1
FAN10G3196 Fragaria x ananassa HOM05D002831 ORTHO05D004341 1.1e-12 78.6 199 35.7
MSTRG.8713 Avicennia marina HOM05D002831 ORTHO05D004341 1.4e-12 78.2 200 34.5
MELO3C006940.2 Cucumis melo HOM05D002831 ORTHO05D004341 2.5e-12 77.4 197 38.6
FAN03G0781 Fragaria x ananassa HOM05D002831 ORTHO05D004341 2.5e-12 77.4 200 36.5
ECA232G1618 Erigeron canadensis HOM05D002831 ORTHO05D004341 3.2e-12 77.0 193 36.3
FAN03G0359 Fragaria x ananassa HOM05D002831 ORTHO05D004341 3.2e-12 77.0 200 36.5
FAN01G0089 Fragaria x ananassa HOM05D002831 ORTHO05D004341 7.2e-12 75.9 200 36.0
Hma1.2p1_0327F.1_g126410 Hydrangea macrophylla HOM05D002831 ORTHO05D004341 7.2e-12 75.9 200 34.0
MBI11_g04751_MAGBIO Magnolia biondii HOM05D002831 ORTHO05D004341 7.2e-12 75.9 184 38.6
CsaV3_3G017430 Cucumis sativus L. HOM05D002831 ORTHO05D004341 1.4e-10 71.6 197 37.1
ClCG05G008340 Citrullus lanatus HOM05D002831 ORTHO05D004341 1.8e-10 71.2 196 37.2
SEGI_15574 Sequoiadendron giganteum HOM05D002831 ORTHO05D004341 6.7e-10 69.3 90 48.9
BcaB03g12482 Brassica carinata HOM05D002831 ORTHO05D004341 5.7e-09 66.2 163 38.0
Medtr1g100090 Medicago truncatula HOM05D002831 ORTHO05D004341 7.4e-09 65.9 120 40.8
Sed0011382 Sechium edule HOM05D002831 ORTHO05D004341 7.4e-09 65.9 195 34.9
Nn1g01625 Nelumbo nucifera HOM05D002831 ORTHO05D004341 1.4e-07 61.6 136 43.4
Sabra06G0007800 Salix brachista HOM05D002831 ORTHO05D010484 4.1e-07 60.1 130 33.8
Os02g0104200 Oryza sativa ssp. japonica HOM05D002831 ORTHO05D004341 5.3e-07 59.7 186 32.8
Sed0001656 Sechium edule HOM05D002831 ORTHO05D004341 3.5e-06 57.0 196 34.2
Sp4g01780 Schrenkiella parvula HOM05D003229 ORTHO05D003835 7.7e-06 55.8 41 75.6


User provided reference genes

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