Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G26840 Arabidopsis lyrata HOM05D000385 ORTHO05D000269 3.8e-66 254.6 120 100.0
Carub.0002s1166 Capsella rubella HOM05D000385 ORTHO05D000269 6.1e-16 87.8 123 43.9
AT1G69660 Arabidopsis thaliana HOM05D000385 ORTHO05D000269 6.3e-13 77.8 99 44.4
AL6G43280 Arabidopsis lyrata HOM05D000385 ORTHO05D000269 5.4e-12 74.7 89 44.9
AL6G43290 Arabidopsis lyrata HOM05D000385 ORTHO05D000269 5.4e-12 74.7 100 44.0
AL4G20950 Arabidopsis lyrata HOM05D000385 ORTHO05D000269 9.1e-12 73.9 99 43.4
Carub.0006s2811 Capsella rubella HOM05D000385 ORTHO05D000269 2.7e-11 72.4 89 46.1
AT3G22080 Arabidopsis thaliana HOM05D000385 ORTHO05D000269 1.0e-10 70.5 97 37.1
AL2G28830 Arabidopsis lyrata HOM05D000385 ORTHO05D000269 1.7e-10 69.7 85 45.9
Thhalv10019611m.g Eutrema salsugineum HOM05D000385 ORTHO05D000269 2.3e-10 69.3 94 39.4
BcaC08g46414 Brassica carinata HOM05D000385 ORTHO05D000269 2.9e-10 68.9 86 41.9
C06p43440 Brassica napus HOM05D000385 ORTHO05D000269 5.0e-10 68.2 86 41.9
Carub.0003s2224 Capsella rubella HOM05D000385 ORTHO05D000269 5.0e-10 68.2 83 43.4
Aa31LG8G8530 Aethionema arabicum HOM05D000385 ORTHO05D000269 6.6e-10 67.8 91 36.3
A07p36050 Brassica napus HOM05D000385 ORTHO05D000269 6.6e-10 67.8 86 40.7
BraA07t31185Z Brassica rapa HOM05D000385 ORTHO05D000269 6.6e-10 67.8 86 40.7
CARHR062590 Cardamine hirsuta HOM05D000385 ORTHO05D000269 6.6e-10 67.8 85 43.5
C06p43450 Brassica napus HOM05D000385 ORTHO05D000269 8.6e-10 67.4 90 40.0
C02p26650 Brassica napus HOM05D000385 ORTHO05D000269 1.5e-09 66.6 205 28.3
C08p45650 Brassica napus HOM05D000385 ORTHO05D000269 1.5e-09 66.6 81 43.2
Aa31LG8G8570 Aethionema arabicum HOM05D000385 ORTHO05D000269 1.9e-09 66.2 89 43.8
AL4G16590 Arabidopsis lyrata HOM05D000385 ORTHO05D000269 4.2e-09 65.1 98 36.7
Thhalv10022296m.g Eutrema salsugineum HOM05D000385 ORTHO05D000269 4.2e-09 65.1 85 41.2
BcaC03g15105 Brassica carinata HOM05D000385 ORTHO05D000269 5.5e-09 64.7 104 34.6
A02p16040 Brassica napus HOM05D000385 ORTHO05D000269 5.5e-09 64.7 89 37.1
BraA02t06665Z Brassica rapa HOM05D000385 ORTHO05D000269 5.5e-09 64.7 89 37.1
A07p31450 Brassica napus HOM05D000385 ORTHO05D000269 9.5e-09 63.9 84 39.3
BolC6t38785H Brassica oleracea HOM05D000385 ORTHO05D000269 1.6e-08 63.2 89 40.4
BcaB04g20546 Brassica carinata HOM05D000385 ORTHO05D000269 2.1e-08 62.8 87 37.9
Aa31LG8G8520 Aethionema arabicum HOM05D000385 ORTHO05D000269 3.6e-08 62.0 84 41.7
AT1G69650 Arabidopsis thaliana HOM05D000385 ORTHO05D000269 3.6e-08 62.0 89 39.3
BcaC03g15103 Brassica carinata HOM05D000385 ORTHO05D000269 1.4e-07 60.1 84 39.3
C02p26630 Brassica napus HOM05D000385 ORTHO05D000269 1.4e-07 60.1 84 39.3
BolC2t08733H Brassica oleracea HOM05D000385 ORTHO05D000269 1.4e-07 60.1 84 39.3
C06p36750 Brassica napus HOM05D000385 ORTHO05D000269 1.8e-07 59.7 89 37.1
CARHR260580 Cardamine hirsuta HOM05D000385 ORTHO05D000269 1.8e-07 59.7 100 38.0
BolC6t39420H Brassica oleracea HOM05D000385 ORTHO05D000269 2.3e-07 59.3 94 38.3
Carub.0002s1632 Capsella rubella HOM05D000385 ORTHO05D000269 2.3e-07 59.3 78 41.0
BcaC08g45879 Brassica carinata HOM05D000385 ORTHO05D000269 3.0e-07 58.9 89 39.3
A05p26760 Brassica napus HOM05D000385 ORTHO05D000269 6.8e-07 57.8 87 39.1
BraA05t21558Z Brassica rapa HOM05D000385 ORTHO05D000269 6.8e-07 57.8 87 39.1
BcaB06g26103 Brassica carinata HOM05D000385 ORTHO05D000269 1.5e-06 56.6 164 28.7
A07p31470 Brassica napus HOM05D000385 ORTHO05D000269 1.5e-06 56.6 89 38.2
C06p36830 Brassica napus HOM05D000385 ORTHO05D000269 1.5e-06 56.6 89 37.1
BraA07t30780Z Brassica rapa HOM05D000385 ORTHO05D000269 1.5e-06 56.6 89 38.2
Aa31LG8G8580 Aethionema arabicum HOM05D000385 ORTHO05D000269 2.6e-06 55.8 163 28.8
BcaB03g15488 Brassica carinata HOM05D000385 ORTHO05D000269 4.4e-06 55.1 90 36.7
C03p51130 Brassica napus HOM05D000385 ORTHO05D000269 4.4e-06 55.1 83 37.3
Thhalv10028049m.g Eutrema salsugineum HOM05D000385 ORTHO05D000269 4.4e-06 55.1 95 31.6
BcaC08g45877 Brassica carinata HOM05D000385 ORTHO05D000269 5.7e-06 54.7 89 37.1


User provided reference genes

Program Settings