Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G26600 Arabidopsis lyrata HOM05D006981 ORTHO05D008719 5.2e-60 234.2 117 100.0
AT5G52220 Arabidopsis thaliana HOM05D006981 ORTHO05D008719 1.5e-59 232.6 117 99.1
CARHR265140 Cardamine hirsuta HOM05D006981 ORTHO05D008719 1.1e-54 216.5 117 90.6
Carub.0008s1231 Capsella rubella HOM05D006981 ORTHO05D008719 2.5e-54 215.3 116 91.4
Thhalv10015042m.g Eutrema salsugineum HOM05D006981 ORTHO05D008719 3.7e-50 201.4 119 85.7
Sp6g14470 Schrenkiella parvula HOM05D006981 ORTHO05D008719 5.3e-49 197.6 118 85.6
BcaC04g20601 Brassica carinata HOM05D006981 ORTHO05D008719 7.0e-49 197.2 116 87.1
BolC9t57050H Brassica oleracea HOM05D006981 ORTHO05D008719 7.0e-49 197.2 116 87.1
Aa31LG3G8600 Aethionema arabicum HOM05D006981 ORTHO05D008719 9.1e-49 196.8 118 83.1
BcaB08g35575 Brassica carinata HOM05D006981 ORTHO05D008719 2.0e-48 195.7 119 84.0
C09p41630 Brassica napus HOM05D006981 ORTHO05D008719 2.7e-48 195.3 116 86.2
A10p09920 Brassica napus HOM05D006981 ORTHO05D008719 2.2e-47 192.2 116 84.5
BraA10t43072Z Brassica rapa HOM05D006981 ORTHO05D008719 1.5e-46 189.5 116 82.8
THA.LOC104825097 Tarenaya hassleriana HOM05D006981 ORTHO05D008719 8.3e-42 173.7 117 74.4
Thecc.03G174800 Theobroma cacao HOM05D006981 ORTHO05D008719 2.3e-36 155.6 120 66.7
TWI14G0356 Tripterygium wilfordii HOM05D006981 ORTHO05D008719 3.0e-36 155.2 118 69.5
Gohir.D08G111300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 8.9e-36 153.7 117 66.7
Gorai.004G119200 Gossypium raimondii HOM05D006981 ORTHO05D008719 8.9e-36 153.7 117 66.7
Nitab4.5_0000080g0060 Nicotiana tabacum HOM05D006981 ORTHO05D008719 8.9e-36 153.7 119 65.5
AUR62021209 Chenopodium quinoa HOM05D006981 ORTHO05D008719 2.0e-35 152.5 120 65.0
Duzib084G0697 Durio zibethinus HOM05D006981 ORTHO05D008719 2.0e-35 152.5 121 67.8
MBI17_g21049_MAGBIO Magnolia biondii HOM05D006981 ORTHO05D008719 2.6e-35 152.1 119 66.4
Nitab4.5_0019580g0020 Nicotiana tabacum HOM05D006981 ORTHO05D008719 3.4e-35 151.8 119 64.7
vmacro06697 Vaccinium macrocarpon HOM05D006981 ORTHO05D008719 3.4e-35 151.8 120 64.2
GSVIVG01010548001 Vitis vinifera HOM05D006981 ORTHO05D008719 3.4e-35 151.8 119 66.4
Ah.13g068510 Amaranthus hybridus HOM05D006981 ORTHO05D008719 4.4e-35 151.4 123 62.6
CDE08G1025 Ceratophyllum demersum HOM05D006981 ORTHO05D008719 4.4e-35 151.4 121 62.8
CAN.G28.6 Capsicum annuum HOM05D006981 ORTHO05D008719 5.7e-35 151.0 119 63.0
Hma1.2p1_0270F.1_g108180 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 5.7e-35 151.0 119 67.2
Duzib205G0859 Durio zibethinus HOM05D006981 ORTHO05D008719 7.5e-35 150.6 121 66.1
Eucgr.K00242 Eucalyptus grandis HOM05D006981 ORTHO05D008719 7.5e-35 150.6 122 64.8
AUR62016001 Chenopodium quinoa HOM05D006981 ORTHO05D008719 9.8e-35 150.2 120 64.2
Cpa.g.sc107.36 Carica papaya HOM05D006981 ORTHO05D008719 1.7e-34 149.4 120 64.2
SGA_v2.0_scaffold2G01066 Striga asiatica HOM05D006981 ORTHO05D008719 1.7e-34 149.4 121 61.2
TAR375G0811 Trochodendron aralioides HOM05D006981 ORTHO05D008719 2.2e-34 149.1 119 68.1
COL.COLO4_14290 Corchorus olitorius HOM05D006981 ORTHO05D008719 3.7e-34 148.3 121 66.1
Hund11756 Selenicereus undatus HOM05D006981 ORTHO05D008719 3.7e-34 148.3 119 63.9
CsaV3_5G005720 Cucumis sativus L. HOM05D006981 ORTHO05D008719 4.9e-34 147.9 120 65.8
Gohir.A08G100300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 4.9e-34 147.9 123 62.6
MELO3C005381.2 Cucumis melo HOM05D006981 ORTHO05D008719 6.3e-34 147.5 119 64.7
Migut.F00354 Erythranthe guttata HOM05D006981 ORTHO05D008719 6.3e-34 147.5 130 60.8
Manes.06G146000 Manihot esculenta HOM05D006981 ORTHO05D008719 6.3e-34 147.5 119 67.2
Lj2g0020265 Lotus japonicus HOM05D006981 ORTHO05D008719 8.3e-34 147.1 114 67.5
Phvul.004G118000 Phaseolus vulgaris HOM05D006981 ORTHO05D008719 1.1e-33 146.7 114 67.5
Solyc06g051300.3 Solanum lycopersicum HOM05D006981 ORTHO05D008719 2.4e-33 145.6 119 60.5
Ciclev10006231m.g Citrus clementina HOM05D006981 ORTHO05D008719 3.1e-33 145.2 119 65.5
PGR142G3060 Punica granatum HOM05D006981 ORTHO05D008719 3.1e-33 145.2 122 62.3
Sc19g0001580 Simmondsia chinensis HOM05D006981 ORTHO05D008719 3.1e-33 145.2 117 68.4
PGSC0003DMG400015647 Solanum tuberosum HOM05D006981 ORTHO05D008719 3.1e-33 145.2 119 60.5
EL10Ac3g05672 Beta vulgaris HOM05D006981 ORTHO05D008719 4.1e-33 144.8 121 61.2
ClCG01G005500 Citrullus lanatus HOM05D003170 ORTHO05D008719 4.1e-33 144.8 119 65.5
Glyma.09G140600 Glycine max HOM05D006981 ORTHO05D008719 4.1e-33 144.8 114 64.9
QL09p014567 Quercus lobata HOM05D006981 ORTHO05D008719 4.1e-33 144.8 119 63.0
VMungo0464G1391 Vigna mungo HOM05D006981 ORTHO05D008719 5.4e-33 144.4 114 66.7
MSTRG.27124 Avicennia marina HOM05D006981 ORTHO05D008719 9.2e-33 143.7 121 62.8
CiPaw.03G105000 Carya illinoinensis HOM05D006981 ORTHO05D008719 9.2e-33 143.7 121 62.0
Glyma.16G194500 Glycine max HOM05D006981 ORTHO05D008719 1.2e-32 143.3 114 64.0
Manes.09G002400 Manihot esculenta HOM05D006981 ORTHO05D008719 1.2e-32 143.3 119 65.5
Oeu056238.2 Olea europaea HOM05D006981 ORTHO05D008719 1.2e-32 143.3 121 61.2
Aqoxy7G00390 Aquilegia oxysepala HOM05D006981 ORTHO05D008719 2.0e-32 142.5 119 61.3
Atru.chr1.479 Acer truncatum HOM05D006981 ORTHO05D008719 2.7e-32 142.1 120 63.3
Sopen06g017220 Solanum pennellii HOM05D006981 ORTHO05D008719 2.7e-32 142.1 117 59.8
Zm00001eb309380 Zea mays HOM05D006981 ORTHO05D008719 2.7e-32 142.1 125 60.8
HanXRQChr08g0209251 Helianthus annuus HOM05D006981 ORTHO05D008719 3.5e-32 141.7 123 61.0
SalBow4G2131 Salvia bowleyana HOM05D006981 ORTHO05D008719 4.5e-32 141.4 118 63.6
Sed0011448 Sechium edule HOM05D006981 ORTHO05D008719 4.5e-32 141.4 119 62.2
DCAR_009354 Daucus carota HOM05D006981 ORTHO05D008719 5.9e-32 141.0 122 60.7
Lsat_1_v5_gn_8_8340 Lactuca sativa HOM05D006981 ORTHO05D008719 5.9e-32 141.0 126 57.9
Nn4g26525 Nelumbo nucifera HOM05D006981 ORTHO05D008719 7.8e-32 140.6 121 63.6
Cfa008306 Carpinus fangiana HOM05D006981 ORTHO05D008719 1.0e-31 140.2 121 62.8
Haze_13729 Corylus avellana HOM05D006981 ORTHO05D008719 1.0e-31 140.2 121 62.8
ECA233G5478 Erigeron canadensis HOM05D006981 ORTHO05D008719 2.3e-31 139.0 133 56.4
Sabra15G0150900 Salix brachista HOM05D006981 ORTHO05D008719 2.3e-31 139.0 126 61.1
SalBow4G1422 Salvia bowleyana HOM05D006981 ORTHO05D008719 2.3e-31 139.0 118 62.7
Cc02_g03150 Coffea canephora HOM05D006981 ORTHO05D008719 2.9e-31 138.7 134 57.5
Actinidia32871 Actinidia chinensis HOM05D006981 ORTHO05D008719 3.8e-31 138.3 140 53.6
Lalb_Chr19g0130931 Lupinus albus HOM05D006981 ORTHO05D008719 3.8e-31 138.3 118 61.9
Medtr6g471020 Medicago truncatula HOM05D006981 ORTHO05D008719 3.8e-31 138.3 114 64.9
Potri.015G140200 Populus trichocarpa HOM05D006981 ORTHO05D008719 3.8e-31 138.3 127 60.6
HPP92_028124 Vanilla planifolia HOM05D006981 ORTHO05D008719 3.8e-31 138.3 120 61.7
RcHm_v2.0_Chr1g0377021 Rosa chinensis HOM05D006981 ORTHO05D008719 5.0e-31 137.9 115 64.3
Prupe.2G292700 Prunus persica HOM05D006981 ORTHO05D008719 6.6e-31 137.5 115 61.7
CSS0044451 Camellia sinensis var. sinensis HOM05D006981 ORTHO05D008719 8.6e-31 137.1 112 65.2
FAN10G3446 Fragaria x ananassa HOM05D006981 ORTHO05D008719 8.6e-31 137.1 115 63.5
FvH4_7g29270 Fragaria vesca HOM05D006981 ORTHO05D008719 1.1e-30 136.7 115 63.5
FAN01G2034 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.1e-30 136.7 118 61.9
FAN03G1713 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.1e-30 136.7 115 63.5
unitig_747.g21767 Utricularia gibba HOM05D006981 ORTHO05D008719 1.1e-30 136.7 121 60.3
Lj1C995G12 Lonicera japonica HOM05D006981 ORTHO05D008719 1.9e-30 136.0 123 58.5
PSO782G4575 Papaver somniferum HOM05D006981 ORTHO05D008719 1.9e-30 136.0 129 57.4
FAN03G1998 Fragaria x ananassa HOM05D006981 ORTHO05D008719 2.5e-30 135.6 115 63.5
HPP92_020865 Vanilla planifolia HOM05D006981 ORTHO05D008719 4.3e-30 134.8 120 60.0
arahy.Tifrunner.gnm1.ann1.8WRD93 Arachis hypogaea HOM05D006981 ORTHO05D008719 5.6e-30 134.4 124 58.9
arahy.Tifrunner.gnm1.ann1.T9EWQW Arachis hypogaea HOM05D006981 ORTHO05D008719 7.3e-30 134.0 123 61.0
CANSAT21G0349 Cannabis sativa HOM05D006981 ORTHO05D008719 7.3e-30 134.0 113 62.8
FAN06G1994 Fragaria x ananassa HOM05D006981 ORTHO05D008719 9.5e-30 133.7 113 63.7
MD07G1267100 Malus domestica HOM05D006981 ORTHO05D008719 1.2e-29 133.3 119 59.7
Ca_25351_v3 Cicer arietinum L. HOM05D000367 ORTHO05D001438 1.6e-29 132.9 114 61.4
PSO478G2189 Papaver somniferum HOM05D006981 ORTHO05D008719 2.1e-29 132.5 130 56.2
SHI13798 Sapria himalayana HOM05D006981 ORTHO05D008719 6.8e-28 127.5 148 47.3
FAN06G2660 Fragaria x ananassa HOM05D006981 ORTHO05D008719 2.0e-27 125.9 113 61.9
SMO141G0174 Selaginella moellendorffii HOM05D006981 ORTHO05D008719 1.2e-24 116.7 120 51.7
Peaxi162Scf00040g00323 Petunia axillaris HOM05D006981 ORTHO05D008719 3.0e-23 112.1 119 52.1
Pp3c14_5260 Physcomitrium patens HOM05D006981 ORTHO05D008719 6.6e-23 110.9 127 52.0
Manes.14G129556 Manihot esculenta HOM05D006981 ORTHO05D008719 3.3e-22 108.6 77 71.4
AagrBONN_evm.TU.Sc2ySwM_369.83 Anthoceros agrestis HOM05D006981 ORTHO05D008719 1.1e-20 103.6 122 48.4
Mapoly0027s0013 Marchantia polymorpha HOM05D006981 ORTHO05D008719 2.3e-20 102.4 129 48.1
Actinidia34099 Actinidia chinensis HOM05D006981 ORTHO05D008719 4.4e-19 98.2 72 62.5
PRCOL_00004746 Prasinoderma coloniale HOM05D006981 ORTHO05D008719 2.9e-18 95.5 120 41.7
Psat1g030600 Pisum sativum HOM05D006981 ORTHO05D008719 2.5e-14 82.4 61 70.5
Cre06.g281750 Chlamydomonas reinhardtii HOM05D006981 ORTHO05D008719 9.5e-14 80.5 121 38.8
Hma1.2p1_0270F.1_g108170 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 1.1e-12 77.0 58 65.5
Psat1g030360 Pisum sativum HOM05D006981 ORTHO05D008719 1.2e-11 73.6 58 56.9
SEGI_30853 Sequoiadendron giganteum HOM05D006981 ORTHO05D008719 1.2e-11 73.6 78 52.6
CBR_g4805 Chara braunii HOM05D006981 ORTHO05D008719 1.2e-08 63.5 108 35.2


User provided reference genes

Program Settings