Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G26520 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 7.2e-55 216.9 99 100.0
Thhalv10001746m.g Eutrema salsugineum HOM05D007394 ORTHO05D009996 6.1e-30 134.0 93 65.6
Sp4g25600 Schrenkiella parvula HOM05D007394 ORTHO05D009996 1.0e-29 133.3 93 63.4
A05p03820 Brassica napus HOM05D007394 ORTHO05D009996 1.8e-29 132.5 90 64.4
BcaC02g12386 Brassica carinata HOM05D007394 ORTHO05D009996 2.3e-29 132.1 90 63.3
C04p04520 Brassica napus HOM05D007394 ORTHO05D009996 2.3e-29 132.1 90 63.3
AL2G24960 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 4.4e-28 127.9 93 62.4
BcaB02g08929 Brassica carinata HOM05D007394 ORTHO05D009996 1.3e-27 126.3 95 60.0
CARHR138610 Cardamine hirsuta HOM05D007394 ORTHO05D009996 1.3e-27 126.3 94 62.8
BcaB02g08934 Brassica carinata HOM05D007394 ORTHO05D009996 1.7e-27 125.9 90 61.1
BcaB02g08928 Brassica carinata HOM05D007394 ORTHO05D009996 2.9e-27 125.2 93 59.1
BraA05t19371Z Brassica rapa HOM05D007394 ORTHO05D009996 2.9e-27 125.2 93 59.1
Sp3g24200 Schrenkiella parvula HOM05D007394 ORTHO05D009996 3.7e-27 124.8 99 60.6
A05p03840 Brassica napus HOM05D007394 ORTHO05D009996 4.9e-27 124.4 93 59.1
Sp4g25610 Schrenkiella parvula HOM05D007394 ORTHO05D009996 6.4e-27 124.0 91 59.3
AT2G43510 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 7.0e-26 120.6 85 60.0
BcaC02g12378 Brassica carinata HOM05D007394 ORTHO05D009996 7.0e-26 120.6 90 58.9
A03p24290 Brassica napus HOM05D007394 ORTHO05D009996 9.2e-26 120.2 94 58.5
BraA03t11637Z Brassica rapa HOM05D007394 ORTHO05D009996 9.2e-26 120.2 94 58.5
BraA03t11639Z Brassica rapa HOM05D007394 ORTHO05D009996 9.2e-26 120.2 94 58.5
Carub.0004s2598 Capsella rubella HOM05D007394 ORTHO05D009996 9.2e-26 120.2 93 59.1
BcaC02g12381 Brassica carinata HOM05D007394 ORTHO05D009996 1.6e-25 119.4 94 57.4
C04p04540 Brassica napus HOM05D007394 ORTHO05D009996 1.6e-25 119.4 93 58.1
BolC4t22087H Brassica oleracea HOM05D007394 ORTHO05D009996 1.6e-25 119.4 93 58.1
AL4G42300 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 2.0e-25 119.0 85 61.2
BcaC02g12384 Brassica carinata HOM05D007394 ORTHO05D009996 2.0e-25 119.0 90 60.0
AL4G42310 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 2.7e-25 118.6 90 61.1
A04p32800 Brassica napus HOM05D007394 ORTHO05D009996 4.6e-25 117.9 95 54.7
BraA04t18742Z Brassica rapa HOM05D007394 ORTHO05D009996 4.6e-25 117.9 95 54.7
C04p04590 Brassica napus HOM05D007394 ORTHO05D009996 7.8e-25 117.1 91 58.2
Carub.0004s2597 Capsella rubella HOM05D007394 ORTHO05D009996 1.7e-24 115.9 88 56.8
BolC4t22090H Brassica oleracea HOM05D007394 ORTHO05D009996 2.3e-24 115.5 91 58.2
BraA05t19373Z Brassica rapa HOM05D007394 ORTHO05D009996 3.0e-24 115.2 88 59.1
AT2G43520 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 3.9e-24 114.8 90 58.9
THA.LOC109116252 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 3.9e-24 114.8 93 53.8
A05p03830 Brassica napus HOM05D007394 ORTHO05D009996 8.6e-24 113.6 94 56.4
CARHR138620 Cardamine hirsuta HOM05D007394 ORTHO05D009996 1.9e-23 112.5 90 53.3
CARHR138640 Cardamine hirsuta HOM05D007394 ORTHO05D009996 1.9e-23 112.5 104 48.1
C04p70500 Brassica napus HOM05D007394 ORTHO05D009996 2.5e-23 112.1 93 55.9
BcaC02g12382 Brassica carinata HOM05D007394 ORTHO05D009996 3.3e-23 111.7 93 53.8
C04p04550 Brassica napus HOM05D007394 ORTHO05D009996 3.3e-23 111.7 93 53.8
CARHR138630 Cardamine hirsuta HOM05D007394 ORTHO05D009996 3.3e-23 111.7 89 58.4
THA.LOC104803932 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 5.6e-23 110.9 93 55.9
BcaB06g29322 Brassica carinata HOM05D007394 ORTHO05D009996 7.3e-23 110.5 71 64.8
Carub.0004s2599 Capsella rubella HOM05D007394 ORTHO05D009996 9.5e-23 110.2 93 50.5
A04p32810 Brassica napus HOM05D007394 ORTHO05D009996 1.2e-22 109.8 93 54.8
BraA04t18743Z Brassica rapa HOM05D007394 ORTHO05D009996 1.2e-22 109.8 93 54.8
THA.LOC104803941 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 1.6e-22 109.4 93 54.8
BcaB01g03378 Brassica carinata HOM05D007394 ORTHO05D009996 2.1e-22 109.0 79 59.5
BcaB06g29321 Brassica carinata HOM05D007394 ORTHO05D009996 2.1e-22 109.0 71 63.4
BcaB02g08930 Brassica carinata HOM05D007394 ORTHO05D009996 2.8e-22 108.6 93 52.7
Aa31LG1G25280 Aethionema arabicum HOM05D007459 ORTHO05D009234 6.2e-22 107.5 85 61.2
A03p24300 Brassica napus HOM05D007394 ORTHO05D009996 8.0e-22 107.1 90 53.3
A04p32790 Brassica napus HOM05D007394 ORTHO05D009996 8.0e-22 107.1 88 58.0
BraA03t11638Z Brassica rapa HOM05D007394 ORTHO05D009996 8.0e-22 107.1 90 53.3
BraA03t11640Z Brassica rapa HOM05D007394 ORTHO05D009996 8.0e-22 107.1 90 53.3
Thhalv10001697m.g Eutrema salsugineum HOM05D007394 ORTHO05D009996 8.0e-22 107.1 91 54.9
BcaB02g10434 Brassica carinata HOM05D007394 ORTHO05D009996 1.1e-21 106.7 92 51.1
C04p70530 Brassica napus HOM05D007394 ORTHO05D009996 1.1e-21 106.7 93 53.8
Sp3g24100 Schrenkiella parvula HOM05D007394 ORTHO05D009996 1.1e-21 106.7 95 51.6
Carub.0002s0551 Capsella rubella HOM05D007394 ORTHO05D009996 2.3e-21 105.5 95 47.4
AL1G53780 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 1.2e-20 103.2 90 52.2
BolC4t28552H Brassica oleracea HOM05D007394 ORTHO05D009996 1.2e-20 103.2 93 51.6
AL4G42320 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 2.6e-20 102.1 97 49.5
AT1G47540 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 2.6e-20 102.1 90 51.1
AT2G43535 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 4.4e-20 101.3 72 58.3
Aa31LG1G25260 Aethionema arabicum HOM05D007394 ORTHO05D009996 9.8e-20 100.1 67 64.2
BcaC01g05230 Brassica carinata HOM05D007394 ORTHO05D009996 9.8e-20 100.1 90 51.1
THA.LOC104803922 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 9.8e-20 100.1 94 50.0
BcaB06g29320 Brassica carinata HOM05D007394 ORTHO05D009996 1.3e-19 99.8 93 50.5
BcaC02g07168 Brassica carinata HOM05D007459 ORTHO05D009234 4.9e-19 97.8 68 63.2
THA.LOC104798701 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 1.1e-18 96.7 92 55.4
Carub.0004s2602 Capsella rubella HOM05D007394 ORTHO05D009996 1.9e-18 95.9 89 51.7
BcaC02g07172 Brassica carinata HOM05D007394 ORTHO05D009996 4.1e-18 94.7 70 58.6
BcaC02g07171 Brassica carinata HOM05D007394 ORTHO05D009996 7.0e-18 94.0 95 48.4
BcaB06g29323 Brassica carinata HOM05D007394 ORTHO05D009996 1.2e-17 93.2 69 53.6
CARHR138650 Cardamine hirsuta HOM05D007394 ORTHO05D009996 2.0e-17 92.4 90 44.4
AT2G43550 Arabidopsis thaliana HOM05D007394 ORTHO05D015383 7.8e-17 90.5 84 53.6
AL4G42350 Arabidopsis lyrata HOM05D007394 ORTHO05D015383 1.7e-16 89.4 86 53.5
Aa31LG1G24860 Aethionema arabicum HOM05D007394 ORTHO05D009996 3.9e-16 88.2 68 57.4
CARHR138680 Cardamine hirsuta HOM05D007394 ORTHO05D015383 1.1e-15 86.7 86 54.7
THA.LOC104803915 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 1.5e-15 86.3 95 42.1
Thhalv10001696m.g Eutrema salsugineum HOM05D007394 ORTHO05D015383 1.9e-15 85.9 85 52.9
Carub.0004s2603 Capsella rubella HOM05D007394 ORTHO05D015383 2.5e-15 85.5 86 51.2
THA.LOC104805814 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 4.3e-15 84.7 96 40.6
BolC3t15251H Brassica oleracea HOM05D007394 ORTHO05D009996 7.3e-15 84.0 70 57.1
C04p70540 Brassica napus HOM05D007394 ORTHO05D015383 1.6e-14 82.8 83 50.6
AT2G43530 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 2.8e-14 82.0 91 44.0
Carub.0004s2604 Capsella rubella HOM05D007394 ORTHO05D009996 2.8e-14 82.0 96 41.7
Sp4g25660 Schrenkiella parvula HOM05D007394 ORTHO05D015383 2.8e-14 82.0 85 50.6
BcaB06g29326 Brassica carinata HOM05D007394 ORTHO05D015383 4.7e-14 81.3 83 50.6
BcaC02g07166 Brassica carinata HOM05D007394 ORTHO05D015383 4.7e-14 81.3 83 50.6
BolC4t28555H Brassica oleracea HOM05D007394 ORTHO05D015383 4.7e-14 81.3 83 50.6
A04p32830 Brassica napus HOM05D007394 ORTHO05D015383 6.2e-14 80.9 83 50.6
BraA04t18745Z Brassica rapa HOM05D007394 ORTHO05D015383 6.2e-14 80.9 83 50.6
Sp4g02290 Schrenkiella parvula HOM05D007394 ORTHO05D009234 6.2e-14 80.9 91 42.9
CARHR123510 Cardamine hirsuta HOM05D014590 ORTHO05D017585 1.2e-12 76.6 93 47.3
Thhalv10001701m.g Eutrema salsugineum HOM05D007394 ORTHO05D032247 7.5e-12 73.9 86 51.2
A04p02110 Brassica napus HOM05D014590 ORTHO05D017585 9.9e-12 73.6 94 44.7
BraA04t15937Z Brassica rapa HOM05D014590 ORTHO05D017585 9.9e-12 73.6 94 44.7
BcaB06g29325 Brassica carinata HOM05D007394 ORTHO05D032247 2.2e-11 72.4 84 45.2
BcaC02g10070 Brassica carinata HOM05D014590 ORTHO05D017585 4.9e-11 71.2 86 44.2
C04p70470 Brassica napus HOM05D007394 ORTHO05D009234 2.4e-10 68.9 91 40.7
BcaC02g07167 Brassica carinata HOM05D007394 ORTHO05D032247 5.4e-10 67.8 84 42.9
Carub.0004s2601 Capsella rubella HOM05D007394 ORTHO05D009996 1.6e-09 66.2 67 46.3
BolC4t28551H Brassica oleracea HOM05D007394 ORTHO05D033140 2.7e-09 65.5 90 38.9


User provided reference genes

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