Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G26470 Arabidopsis lyrata HOM05D005936 ORTHO05D007967 5.4e-162 574.3 299 100.0
AT5G52100 Arabidopsis thaliana HOM05D005936 ORTHO05D007967 1.6e-158 562.8 299 97.7
Carub.0008s1218 Capsella rubella HOM05D005936 ORTHO05D007967 1.8e-157 559.3 299 96.7
Sp6g14350 Schrenkiella parvula HOM05D005936 ORTHO05D007967 3.7e-155 551.6 299 94.6
SpUn0060_0040 Schrenkiella parvula HOM05D005936 ORTHO05D007967 3.7e-155 551.6 299 94.6
BcaB01g04183 Brassica carinata HOM05D005936 ORTHO05D007967 1.8e-154 549.3 301 95.0
BcaC01g06163 Brassica carinata HOM05D005936 ORTHO05D007967 7.0e-154 547.4 301 95.0
BolC3t14249H Brassica oleracea HOM05D005936 ORTHO05D007967 7.0e-154 547.4 301 95.0
BraA03t10875Z Brassica rapa HOM05D005936 ORTHO05D007967 8.6e-152 540.4 301 94.0
A03p15850 Brassica napus HOM05D005936 ORTHO05D007967 2.9e-147 525.4 290 94.5
Aa31LG3G8470 Aethionema arabicum HOM05D005936 ORTHO05D007967 3.5e-145 518.5 305 89.8
C03p18520 Brassica napus HOM05D005936 ORTHO05D007967 1.1e-143 513.5 315 87.3
THA.LOC104811994 Tarenaya hassleriana HOM05D005936 ORTHO05D007967 4.7e-142 508.1 298 89.3
Cfa008280 Carpinus fangiana HOM05D005936 ORTHO05D007967 1.3e-128 463.4 303 79.5
Potri.015G135400 Populus trichocarpa HOM05D005936 ORTHO05D007967 1.1e-127 460.3 303 79.2
Thecc.03G170800 Theobroma cacao HOM05D005936 ORTHO05D007967 3.3e-127 458.8 302 77.5
Peaxi162Scf00915g00243 Petunia axillaris HOM05D005936 ORTHO05D007967 5.6e-127 458.0 303 77.6
Nitab4.5_0005024g0030 Nicotiana tabacum HOM05D005936 ORTHO05D007967 2.1e-126 456.1 306 76.5
Duzib084G0661 Durio zibethinus HOM05D005936 ORTHO05D007967 3.6e-126 455.3 302 78.8
Gohir.D09G040700 Gossypium hirsutum HOM05D005936 ORTHO05D007967 8.1e-126 454.1 303 78.9
Gorai.006G046600 Gossypium raimondii HOM05D005936 ORTHO05D007967 8.1e-126 454.1 303 78.9
Migut.F00375 Erythranthe guttata HOM05D005936 ORTHO05D007967 1.4e-125 453.4 300 77.3
CSS0027176 Camellia sinensis var. sinensis HOM05D005936 ORTHO05D007967 2.4e-125 452.6 282 82.3
CSS0048625 Camellia sinensis var. sinensis HOM05D005936 ORTHO05D007967 2.4e-125 452.6 282 82.3
Nitab4.5_0001083g0080 Nicotiana tabacum HOM05D005936 ORTHO05D007967 2.4e-125 452.6 308 76.0
CiPaw.04G067400 Carya illinoinensis HOM05D005936 ORTHO05D007967 3.1e-125 452.2 303 77.6
Sabra15G0147400 Salix brachista HOM05D005936 ORTHO05D007967 2.0e-124 449.5 298 78.2
Solyc03g026210.4 Solanum lycopersicum HOM05D005936 ORTHO05D007967 4.4e-124 448.4 300 77.7
Gohir.A09G039900 Gossypium hirsutum HOM05D005936 ORTHO05D007967 9.9e-124 447.2 303 77.6
MD07G1264500 Malus domestica HOM05D005936 ORTHO05D007967 1.3e-123 446.8 304 77.3
PGSC0003DMG400014268 Solanum tuberosum HOM05D005936 ORTHO05D007967 1.7e-123 446.4 300 77.0
GSVIVG01010618001 Vitis vinifera HOM05D005936 ORTHO05D007967 2.9e-123 445.7 278 81.7
FvH4_7g29020 Fragaria vesca HOM05D005936 ORTHO05D007967 4.9e-123 444.9 303 77.2
FAN06G1408 Fragaria x ananassa HOM05D005936 ORTHO05D007967 4.9e-123 444.9 303 77.2
Actinidia34080 Actinidia chinensis HOM05D005936 ORTHO05D007967 8.4e-123 444.1 282 81.2
ClCG05G007820 Citrullus lanatus HOM05D005936 ORTHO05D007967 1.1e-122 443.7 302 77.8
CsaV3_3G016820 Cucumis sativus L. HOM05D005936 ORTHO05D007967 1.9e-122 443.0 301 77.4
QL09p014981 Quercus lobata HOM05D005936 ORTHO05D007967 1.9e-122 443.0 301 76.7
AUR62021235 Chenopodium quinoa HOM05D005936 ORTHO05D007967 2.4e-122 442.6 299 76.3
FAN06G0122 Fragaria x ananassa HOM05D005936 ORTHO05D007967 2.4e-122 442.6 303 76.9
Oeu021758.1 Olea europaea HOM05D005936 ORTHO05D007967 2.4e-122 442.6 302 77.2
Ah.13g068310 Amaranthus hybridus HOM05D005936 ORTHO05D007967 3.2e-122 442.2 300 76.3
Eucgr.A02812 Eucalyptus grandis HOM05D005936 ORTHO05D007967 3.2e-122 442.2 302 76.2
Nn1g01364 Nelumbo nucifera HOM05D005936 ORTHO05D007967 4.2e-122 441.8 291 75.6
FAN03G0200 Fragaria x ananassa HOM05D005936 ORTHO05D007967 5.4e-122 441.4 302 76.8
FAN03G0500 Fragaria x ananassa HOM05D005936 ORTHO05D007967 9.3e-122 440.7 302 76.5
vmacro06722 Vaccinium macrocarpon HOM05D005936 ORTHO05D007967 9.3e-122 440.7 284 79.2
Prupe.2G290400 Prunus persica HOM05D005936 ORTHO05D007967 2.1e-121 439.5 282 80.9
CANSAT21G0538 Cannabis sativa HOM05D005936 ORTHO05D007967 4.6e-121 438.3 305 76.1
PGR042G3346 Punica granatum HOM05D005936 ORTHO05D007967 4.6e-121 438.3 281 79.4
DCAR_018171 Daucus carota HOM05D005936 ORTHO05D007967 7.8e-121 437.6 303 75.2
SalBow1G7635 Salvia bowleyana HOM05D005936 ORTHO05D007967 1.3e-120 436.8 302 75.8
CANSAT21G1747 Cannabis sativa HOM05D005936 ORTHO05D007967 2.3e-120 436.0 301 76.1
AUR62016030 Chenopodium quinoa HOM05D005936 ORTHO05D007967 2.3e-120 436.0 307 74.6
Cc00_g24160 Coffea canephora HOM05D005936 ORTHO05D007967 6.6e-120 434.5 305 73.8
Hma1.2p1_0270F.1_g108440 Hydrangea macrophylla HOM05D005936 ORTHO05D007967 8.7e-120 434.1 302 75.2
PSO478G3778 Papaver somniferum HOM05D005936 ORTHO05D007967 2.5e-119 432.6 303 74.6
Rhsim03G0177300 Rhododendron simsii HOM05D005936 ORTHO05D007967 3.3e-119 432.2 294 76.9
Lsat_1_v5_gn_8_7461 Lactuca sativa HOM05D005936 ORTHO05D007967 5.6e-119 431.4 290 75.9
TAR374G0336 Trochodendron aralioides HOM05D005936 ORTHO05D007967 5.6e-119 431.4 286 77.3
Ciclev10005510m.g Citrus clementina HOM05D005936 ORTHO05D007967 9.6e-119 430.6 291 77.0
RcHm_v2.0_Chr1g0376731 Rosa chinensis HOM05D005936 ORTHO05D007967 1.6e-118 429.9 301 75.7
VMungo0720G1210 Vigna mungo HOM05D005936 ORTHO05D007967 3.6e-118 428.7 305 73.8
Aqoxy7G00442 Aquilegia oxysepala HOM05D005936 ORTHO05D007967 4.0e-117 425.2 281 76.5
TPR.G17430 Trifolium pratense HOM05D005936 ORTHO05D007967 9.0e-117 424.1 306 74.2
COL.COLO4_14264 Corchorus olitorius HOM05D005936 ORTHO05D007967 1.5e-116 423.3 302 74.5
Medtr1g101400 Medicago truncatula HOM05D005936 ORTHO05D007967 1.5e-116 423.3 305 74.8
ATR0757G004 Amborella trichopoda HOM05D005936 ORTHO05D007967 2.6e-116 422.5 297 72.1
HanXRQChr13g0405681 Helianthus annuus HOM05D005936 ORTHO05D007967 2.6e-116 422.5 290 73.4
Phvul.007G066600 Phaseolus vulgaris HOM05D005936 ORTHO05D007967 5.8e-116 421.4 305 72.1
Lalb_Chr21g0304951 Lupinus albus HOM05D005936 ORTHO05D007967 7.6e-116 421.0 288 75.3
EL10Ac3g05696 Beta vulgaris HOM05D005936 ORTHO05D007967 1.7e-115 419.9 299 73.2
Glyma.10G238800 Glycine max HOM05D005936 ORTHO05D007967 2.9e-115 419.1 277 78.3
Thhalv10014460m.g Eutrema salsugineum HOM05D005936 ORTHO05D007967 1.1e-114 417.2 227 94.3
LjContig00238g0017909 Lotus japonicus HOM05D005936 ORTHO05D007967 1.1e-114 417.2 303 72.6
PSO782G1152 Papaver somniferum HOM05D005936 ORTHO05D007967 7.1e-114 414.5 293 74.1
ECA233G0165 Erigeron canadensis HOM05D005936 ORTHO05D007967 1.2e-113 413.7 272 76.1
arahy.Tifrunner.gnm1.ann1.UTGK89 Arachis hypogaea HOM05D005936 ORTHO05D007967 2.3e-112 409.5 310 70.6
Hma1.2p1_0010F.1_g006890 Hydrangea macrophylla HOM05D005936 ORTHO05D007967 8.7e-112 407.5 262 78.6
Manes.06G143900 Manihot esculenta HOM05D005936 ORTHO05D007967 9.3e-106 387.5 262 75.6
Os03g0118600 Oryza sativa ssp. japonica HOM05D005936 ORTHO05D007967 2.7e-105 386.0 277 69.7
Haze_13754 Corylus avellana HOM05D005936 ORTHO05D007967 1.0e-104 384.0 272 74.6
arahy.Tifrunner.gnm1.ann1.AYWY8E Arachis hypogaea HOM05D005936 ORTHO05D007967 2.3e-104 382.9 298 71.1
MELO3C006876.2 Cucumis melo HOM05D005936 ORTHO05D007967 8.7e-104 380.9 264 76.5
Dinv28478 Davidia involucrata HOM05D005936 ORTHO05D007967 1.5e-103 380.2 272 73.5
TWI23G0201 Tripterygium wilfordii HOM05D005936 ORTHO05D007967 2.8e-102 375.9 294 68.0
Lj1C993G3 Lonicera japonica HOM05D005936 ORTHO05D007967 3.7e-102 375.6 303 67.3
unitig_0.g2488 Utricularia gibba HOM05D005936 ORTHO05D007967 8.2e-102 374.4 264 71.6
Psat6g200960 Pisum sativum HOM05D005936 ORTHO05D007967 2.0e-100 369.8 241 78.4
MBI12_g29760_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 5.8e-100 368.2 303 67.7
Ca_10793_v3 Cicer arietinum L. HOM05D005936 ORTHO05D007967 4.2e-98 362.1 267 73.0
CDE09G1316 Ceratophyllum demersum HOM05D005936 ORTHO05D007967 1.2e-97 360.5 241 74.7
Sed0016287 Sechium edule HOM05D005936 ORTHO05D007967 6.3e-94 348.2 220 80.5
SEGI_11434 Sequoiadendron giganteum HOM05D005936 ORTHO05D007967 3.2e-90 335.9 282 58.9
TAR375G0526 Trochodendron aralioides HOM05D005936 ORTHO05D007967 7.4e-87 324.7 263 67.7
Actinidia32894 Actinidia chinensis HOM05D005936 ORTHO05D007967 9.1e-85 317.8 244 70.5
Pp3c21_9920 Physcomitrium patens HOM05D005936 ORTHO05D007967 5.5e-82 308.5 280 54.3
Mapoly0001s0282 Marchantia polymorpha HOM05D005936 ORTHO05D007967 2.7e-81 306.2 276 58.3
Glyma.20G155600 Glycine max HOM05D005936 ORTHO05D007967 2.6e-79 299.7 220 72.7
vmacro06720 Vaccinium macrocarpon HOM05D005936 ORTHO05D007967 1.1e-77 294.3 265 63.0
SMO367G1305 Selaginella moellendorffii HOM05D005936 ORTHO05D007967 2.0e-76 290.0 280 53.2
CARHR265020 Cardamine hirsuta HOM05D005936 ORTHO05D007967 1.3e-75 287.3 155 94.8
Hund04704 Selenicereus undatus HOM05D005936 ORTHO05D007967 2.6e-71 273.1 250 61.2
MD01G1197100 Malus domestica HOM05D005936 ORTHO05D007967 1.6e-68 263.8 323 52.9
Zm00001eb001140 Zea mays HOM05D005936 ORTHO05D007967 3.2e-66 256.1 190 68.9
CBR_g30244 Chara braunii HOM05D005936 ORTHO05D007967 2.7e-65 253.1 284 47.5
MD01G1197000 Malus domestica HOM05D005936 ORTHO05D007967 1.0e-59 234.6 289 51.9
MBI12_g45864_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 1.5e-58 230.7 215 61.4
MBI18_g06814_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 2.5e-58 229.9 276 50.4
MBI18_g40469_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 2.7e-57 226.5 182 66.5
CAN.G548.3 Capsicum annuum HOM05D005936 ORTHO05D007967 3.1e-53 213.0 158 71.5
Cpa.g.sc107.7 Carica papaya HOM05D005936 ORTHO05D007967 3.1e-53 213.0 155 71.0
AagrBONN_evm.TU.Sc2ySwM_340.388 Anthoceros agrestis HOM05D003851 ORTHO05D005657 1.5e-50 204.1 204 51.5
MSTRG.8763 Avicennia marina HOM05D005936 ORTHO05D007967 4.2e-50 202.6 160 69.4
Duzib205G1997 Durio zibethinus HOM05D005936 ORTHO05D007967 2.1e-49 200.3 227 53.7
Sopen03g005080 Solanum pennellii HOM05D005936 ORTHO05D007967 6.1e-49 198.7 155 69.0
MBI09_g40772_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 7.0e-45 185.3 154 63.6
MBI18_g34964_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 6.6e-43 178.7 154 61.7
Cpa.g.sc107.8 Carica papaya HOM05D005936 ORTHO05D007967 1.5e-42 177.6 118 76.3
Os03g0117000 Oryza sativa ssp. japonica HOM05D005936 ORTHO05D007967 3.3e-42 176.4 203 51.2
MBI18_g28463_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 1.6e-41 174.1 155 61.3
FAN01G1428 Fragaria x ananassa HOM05D005936 ORTHO05D007967 5.8e-39 165.6 200 52.5
MBI08_g23116_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 2.4e-37 160.2 139 61.9
MBI07_g12175_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 6.4e-30 135.6 158 50.6
MBI15_g15729_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 3.1e-16 90.1 83 59.0
RcHm_v2.0_Chr1g0376771 Rosa chinensis HOM05D005936 ORTHO05D342530 6.0e-12 75.9 134 40.3
MBI16_g19597_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 2.1e-09 67.4 86 44.2


User provided reference genes

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