Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G25950 Arabidopsis lyrata HOM05D006795 ORTHO05D008573 1.1e-109 399.8 184 100.0
Carub.0008s1172 Capsella rubella HOM05D006795 ORTHO05D008573 1.9e-101 372.5 184 92.9
AT5G51700 Arabidopsis thaliana HOM05D006795 ORTHO05D008573 1.4e-99 366.3 184 90.8
Sp6g13920 Schrenkiella parvula HOM05D006795 ORTHO05D008573 4.9e-97 357.8 185 88.1
BolC2t08156H Brassica oleracea HOM05D006795 ORTHO05D008573 4.5e-95 351.3 187 88.8
Thhalv10014608m.g Eutrema salsugineum HOM05D006795 ORTHO05D008573 4.5e-95 351.3 178 89.3
C02p20240 Brassica napus HOM05D006795 ORTHO05D008573 1.0e-94 350.1 187 88.2
BcaB08g35519 Brassica carinata HOM05D006795 ORTHO05D008573 1.3e-94 349.7 186 86.0
BraA02t06278Z Brassica rapa HOM05D006795 ORTHO05D008573 3.9e-94 348.2 187 88.2
BcaC03g14579 Brassica carinata HOM05D006795 ORTHO05D008573 5.0e-94 347.8 187 87.7
A02p12140 Brassica napus HOM05D006795 ORTHO05D008573 6.6e-94 347.4 187 87.7
BcaB05g23990 Brassica carinata HOM05D006795 ORTHO05D008573 2.5e-93 345.5 187 88.2
CARHR264540 Cardamine hirsuta HOM05D006795 ORTHO05D008573 2.5e-93 345.5 181 87.3
Aa31LG3G8130 Aethionema arabicum HOM05D006795 ORTHO05D008573 1.4e-88 329.7 177 84.2
A10p09570 Brassica napus HOM05D006795 ORTHO05D008573 1.4e-88 329.7 190 83.2
BraA10t43032Z Brassica rapa HOM05D006795 ORTHO05D008573 1.4e-88 329.7 190 83.2
Haze_13816 Corylus avellana HOM05D006795 ORTHO05D008573 2.0e-74 282.7 182 69.8
FAN06G0634 Fragaria x ananassa HOM05D001585 ORTHO05D001677 5.8e-74 281.2 182 67.6
FAN06G3003 Fragaria x ananassa HOM05D001585 ORTHO05D001677 5.8e-74 281.2 182 67.6
MD07G1259600 Malus domestica HOM05D006795 ORTHO05D008573 7.6e-74 280.8 181 68.5
FvH4_7g28300 Fragaria vesca HOM05D006795 ORTHO05D008573 1.3e-73 280.0 182 67.6
THA.LOC104825075 Tarenaya hassleriana HOM05D006795 ORTHO05D008573 1.7e-73 279.6 179 71.5
GSVIVG01018489001 Vitis vinifera HOM05D006795 ORTHO05D008573 2.9e-73 278.9 180 71.7
Prupe.2G283700 Prunus persica HOM05D006795 ORTHO05D008573 3.7e-73 278.5 182 68.1
FAN03G1859 Fragaria x ananassa HOM05D001585 ORTHO05D001677 6.4e-73 277.7 183 67.8
MD01G1187300 Malus domestica HOM05D006795 ORTHO05D008573 6.4e-73 277.7 182 67.6
RcHm_v2.0_Chr1g0375271 Rosa chinensis HOM05D006795 ORTHO05D008573 8.3e-73 277.3 184 67.9
FAN10G2418 Fragaria x ananassa HOM05D006795 ORTHO05D008573 1.1e-72 276.9 183 66.7
PGR042G2278 Punica granatum HOM05D006795 ORTHO05D008573 1.1e-72 276.9 184 66.8
FAN03G1183 Fragaria x ananassa HOM05D001585 ORTHO05D001677 1.4e-72 276.6 183 67.2
CAN.G1187.5 Capsicum annuum HOM05D006795 ORTHO05D008573 2.4e-72 275.8 185 66.5
Cpa.g.sc3.258 Carica papaya HOM05D006795 ORTHO05D008573 3.2e-72 275.4 185 67.6
COL.COLO4_14197 Corchorus olitorius HOM05D006795 ORTHO05D008573 4.1e-72 275.0 181 69.1
arahy.Tifrunner.gnm1.ann1.939HGU Arachis hypogaea HOM05D006795 ORTHO05D008573 7.1e-72 274.2 185 68.1
Oeu021736.1 Olea europaea HOM05D006795 ORTHO05D008573 7.1e-72 274.2 184 68.5
Manes.06G139000 Manihot esculenta HOM05D006795 ORTHO05D008573 2.1e-71 272.7 181 68.0
arahy.Tifrunner.gnm1.ann1.ATT3CU Arachis hypogaea HOM05D006795 ORTHO05D008573 4.6e-71 271.6 185 67.6
Dinv07998 Davidia involucrata HOM05D006795 ORTHO05D008573 4.6e-71 271.6 183 66.1
Medtr1g102470 Medicago truncatula HOM05D006795 ORTHO05D008573 1.0e-70 270.4 186 66.7
Lj5g0021204 Lotus japonicus HOM05D006795 ORTHO05D008573 1.3e-70 270.0 186 64.5
Peaxi162Scf00132g00138 Petunia axillaris HOM05D006795 ORTHO05D008573 1.7e-70 269.6 183 65.0
CANSAT21G1655 Cannabis sativa HOM05D006795 ORTHO05D008573 2.3e-70 269.2 182 68.1
PSO478G2429 Papaver somniferum HOM05D006795 ORTHO05D008573 2.3e-70 269.2 178 66.3
Potri.015G132300 Populus trichocarpa HOM05D006795 ORTHO05D008573 2.3e-70 269.2 183 65.0
PSO782G4689 Papaver somniferum HOM05D006795 ORTHO05D008573 3.9e-70 268.5 178 66.3
Lj8A35T83 Lonicera japonica HOM05D006795 ORTHO05D008573 6.6e-70 267.7 181 67.4
Manes.06G149000 Manihot esculenta HOM05D006795 ORTHO05D008573 6.6e-70 267.7 181 66.3
Thecc.03G163300 Theobroma cacao HOM05D006795 ORTHO05D008573 8.6e-70 267.3 181 67.4
TWI39G0269 Tripterygium wilfordii HOM05D006795 ORTHO05D008573 1.9e-69 266.2 181 68.5
CiPaw.03G097900 Carya illinoinensis HOM05D006795 ORTHO05D008573 3.3e-69 265.4 183 65.0
Ciclev10005807m.g Citrus clementina HOM05D006795 ORTHO05D008573 5.6e-69 264.6 183 66.1
SGA_v2.0_scaffold2G01112 Striga asiatica HOM05D006795 ORTHO05D008573 5.6e-69 264.6 187 66.3
Duzib068G1417 Durio zibethinus HOM05D006795 ORTHO05D008573 7.3e-69 264.2 183 65.6
ECA238G4708 Erigeron canadensis HOM05D006795 ORTHO05D008573 9.6e-69 263.8 181 66.3
Hund04657 Selenicereus undatus HOM05D006795 ORTHO05D008573 9.6e-69 263.8 185 65.9
CSS0024840 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 1.2e-68 263.5 184 65.2
AUR62035033 Chenopodium quinoa HOM05D006795 ORTHO05D008573 2.8e-68 262.3 183 65.6
Migut.F00416 Erythranthe guttata HOM05D006795 ORTHO05D008573 2.8e-68 262.3 182 63.2
Psat6g202120 Pisum sativum HOM05D006795 ORTHO05D008573 4.7e-68 261.5 186 66.1
Psat6g202920 Pisum sativum HOM05D006795 ORTHO05D008573 4.7e-68 261.5 186 66.1
Sabra15G0145100 Salix brachista HOM05D006795 ORTHO05D008573 4.7e-68 261.5 183 65.0
Sc13g0008130 Simmondsia chinensis HOM05D006795 ORTHO05D008573 6.2e-68 261.2 182 66.5
Sopen11g029960 Solanum pennellii HOM05D006795 ORTHO05D008573 6.2e-68 261.2 186 64.5
TAR636G0045 Trochodendron aralioides HOM05D006795 ORTHO05D008573 6.2e-68 261.2 183 63.4
vmacro06760 Vaccinium macrocarpon HOM05D006795 ORTHO05D008573 6.2e-68 261.2 185 65.9
Actinidia03085 Actinidia chinensis HOM05D006795 ORTHO05D008573 8.1e-68 260.8 181 65.7
Nn1g01176 Nelumbo nucifera HOM05D006795 ORTHO05D008573 8.1e-68 260.8 182 63.2
Actinidia31794 Actinidia chinensis HOM05D006795 ORTHO05D008573 1.8e-67 259.6 185 65.4
AUR62016086 Chenopodium quinoa HOM05D006795 ORTHO05D008573 1.8e-67 259.6 183 63.9
Cc02_g03780 Coffea canephora HOM05D006795 ORTHO05D008573 1.8e-67 259.6 182 64.8
Solyc11g072290.3 Solanum lycopersicum HOM05D006795 ORTHO05D008573 1.8e-67 259.6 186 63.4
unitig_0.g1164 Utricularia gibba HOM05D006795 ORTHO05D008573 2.4e-67 259.2 186 62.4
Lsat_1_v5_gn_2_129741 Lactuca sativa HOM05D006795 ORTHO05D008573 4.0e-67 258.5 187 65.2
Nitab4.5_0001589g0020 Nicotiana tabacum HOM05D006795 ORTHO05D008573 6.8e-67 257.7 182 61.0
Aqoxy7G00570 Aquilegia oxysepala HOM05D006795 ORTHO05D008573 8.9e-67 257.3 182 62.6
Nitab4.5_0000205g0150 Nicotiana tabacum HOM05D006795 ORTHO05D008573 8.9e-67 257.3 183 62.3
Rhsim03G0172800 Rhododendron simsii HOM05D006795 ORTHO05D008573 8.9e-67 257.3 181 65.7
Glyma.10G242200 Glycine max HOM05D006795 ORTHO05D008573 1.2e-66 256.9 182 62.6
QL12p039358 Quercus lobata HOM05D006795 ORTHO05D008573 1.2e-66 256.9 182 64.8
MSTRG.119 Avicennia marina HOM05D006795 ORTHO05D008573 1.5e-66 256.5 179 62.0
Ah.13g067570 Amaranthus hybridus HOM05D006795 ORTHO05D008573 3.4e-66 255.4 183 65.0
CDE06G1038 Ceratophyllum demersum HOM05D006795 ORTHO05D008573 1.7e-65 253.1 183 63.4
ClCG11G008970 Citrullus lanatus HOM05D006795 ORTHO05D008573 3.8e-65 251.9 182 63.2
FAN01G1007 Fragaria x ananassa HOM05D006795 ORTHO05D008573 4.9e-65 251.5 179 64.8
Glyma.20G151900 Glycine max HOM05D006795 ORTHO05D008573 4.9e-65 251.5 182 61.0
Gohir.A09G178600 Gossypium hirsutum HOM05D006795 ORTHO05D008573 4.9e-65 251.5 183 65.6
Gohir.D09G174200 Gossypium hirsutum HOM05D006795 ORTHO05D008573 4.9e-65 251.5 183 65.6
Gorai.006G196200 Gossypium raimondii HOM05D006795 ORTHO05D008573 4.9e-65 251.5 183 65.6
HPP92_005470 Vanilla planifolia HOM05D006795 ORTHO05D008573 1.1e-64 250.4 178 64.0
EL10Ac3g05773 Beta vulgaris HOM05D006795 ORTHO05D008573 1.4e-64 250.0 183 62.3
TPR.G26107 Trifolium pratense HOM05D006795 ORTHO05D008573 1.4e-64 250.0 183 62.8
Atru.chr1.614 Acer truncatum HOM05D006795 ORTHO05D008573 1.9e-64 249.6 186 62.9
Sed0014900 Sechium edule HOM05D006795 ORTHO05D008573 4.2e-64 248.4 181 64.1
ATR1145G092 Amborella trichopoda HOM05D006795 ORTHO05D008573 7.1e-64 247.7 192 60.4
Os02g0535400 Oryza sativa ssp. japonica HOM05D006795 ORTHO05D008573 9.3e-64 247.3 177 63.3
Lalb_Chr02g0140771 Lupinus albus HOM05D006795 ORTHO05D008573 1.2e-63 246.9 180 61.1
SEGI_28069 Sequoiadendron giganteum HOM05D006795 ORTHO05D008573 1.2e-63 246.9 180 63.3
CsaV3_2G010830 Cucumis sativus L. HOM05D006795 ORTHO05D008573 4.6e-63 245.0 179 61.5
Eucgr.A02872 Eucalyptus grandis HOM05D006795 ORTHO05D008573 7.8e-63 244.2 186 61.3
Zm00001eb242890 Zea mays HOM05D006795 ORTHO05D008573 8.7e-62 240.7 177 61.0
Mapoly0020s0061 Marchantia polymorpha HOM05D006795 ORTHO05D008573 8.1e-60 234.2 183 57.4
Pp3c14_10540 Physcomitrium patens HOM05D006795 ORTHO05D008573 1.7e-57 226.5 191 58.1
Oeu042417.2 Olea europaea HOM05D006795 ORTHO05D008573 2.9e-57 225.7 168 63.7
Ca_10834_v3 Cicer arietinum L. HOM05D006795 ORTHO05D008573 1.4e-56 223.4 180 61.1
CBR_g32001 Chara braunii HOM05D006795 ORTHO05D008573 3.5e-55 218.8 179 54.2
SMO146G0237 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 7.9e-55 217.6 179 57.5
SalBow4G0392 Salvia bowleyana HOM05D006795 ORTHO05D008573 1.3e-54 216.9 157 61.8
SalBow4G1076 Salvia bowleyana HOM05D006795 ORTHO05D008573 1.3e-54 216.9 157 61.8
CSS0028605 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 7.3e-53 211.1 159 61.6
VMungo0720G2517 Vigna mungo HOM05D006795 ORTHO05D008573 1.1e-48 197.2 156 57.7
Phvul.007G063300 Phaseolus vulgaris HOM05D006795 ORTHO05D008573 3.9e-46 188.7 137 58.4
PGSC0003DMG400027380 Solanum tuberosum HOM05D006795 ORTHO05D008573 1.9e-45 186.4 129 62.8
TAR629G1442 Trochodendron aralioides HOM05D006795 ORTHO05D008573 2.1e-44 183.0 161 55.9
MCO02G265 Micromonas commoda HOM05D006795 ORTHO05D008573 3.7e-44 182.2 182 46.7
MELO3C008527.2 Cucumis melo HOM05D006795 ORTHO05D008573 7.6e-34 147.9 76 73.7
Zm00001eb181460 Zea mays HOM05D006795 ORTHO05D008573 3.8e-33 145.6 89 67.4
PRCOL_00002330 Prasinoderma coloniale HOM05D006795 ORTHO05D008573 8.5e-09 64.7 61 41.0
SMO146G0045 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 8.0e-07 58.2 149 32.9


User provided reference genes

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