Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G25850 Arabidopsis lyrata HOM05D007220 ORTHO05D009058 1.6e-98 362.8 189 100.0
AT5G51545 Arabidopsis thaliana HOM05D007220 ORTHO05D009058 1.8e-83 312.8 190 88.9
Carub.0008s1158 Capsella rubella HOM05D007220 ORTHO05D009058 1.3e-76 290.0 190 84.2
BcaC01g06128 Brassica carinata HOM05D007220 ORTHO05D009058 1.2e-69 266.9 190 75.3
C03p18980 Brassica napus HOM05D007220 ORTHO05D009058 1.2e-69 266.9 190 75.3
BolC3t14287H Brassica oleracea HOM05D007220 ORTHO05D009058 1.2e-69 266.9 190 75.3
BraA03t10902Z Brassica rapa HOM05D007220 ORTHO05D009058 3.7e-68 261.9 190 74.2
CARHR264320 Cardamine hirsuta HOM05D007220 ORTHO05D009058 4.9e-68 261.5 195 74.9
BcaB01g04168 Brassica carinata HOM05D007220 ORTHO05D009058 1.6e-63 246.5 189 69.3
Sp6g13740 Schrenkiella parvula HOM05D007220 ORTHO05D009058 8.9e-62 240.7 189 71.4
THA.LOC104811513 Tarenaya hassleriana HOM05D007220 ORTHO05D009058 4.9e-60 235.0 194 67.5
A03p16110 Brassica napus HOM05D007220 ORTHO05D009058 1.7e-57 226.5 189 65.6
Aa31LG3G7960 Aethionema arabicum HOM05D007220 ORTHO05D009058 5.6e-56 221.5 189 65.1
Manes.14G034000 Manihot esculenta HOM05D007220 ORTHO05D009058 1.3e-44 183.7 199 51.8
Duzib205G1715 Durio zibethinus HOM05D007220 ORTHO05D009058 8.4e-44 181.0 197 55.8
Thecc.03G158900 Theobroma cacao HOM05D007220 ORTHO05D009058 9.2e-43 177.6 196 55.6
TWI39G1186 Tripterygium wilfordii HOM05D007220 ORTHO05D009058 1.6e-42 176.8 193 52.3
Cpa.g.sc3.292 Carica papaya HOM05D007220 ORTHO05D009058 2.3e-41 172.9 198 50.0
ClCG05G007450 Citrullus lanatus HOM05D007220 ORTHO05D009058 6.6e-41 171.4 198 53.0
CsaV3_3G016270 Cucumis sativus L. HOM05D007220 ORTHO05D009058 1.9e-40 169.9 192 52.6
MELO3C006826.2 Cucumis melo HOM05D007220 ORTHO05D009058 2.5e-40 169.5 198 53.0
Cfa008220 Carpinus fangiana HOM05D007220 ORTHO05D009058 4.3e-40 168.7 199 51.3
COL.COLO4_14153 Corchorus olitorius HOM05D007220 ORTHO05D009058 4.3e-40 168.7 193 52.3
Haze_13838 Corylus avellana HOM05D007220 ORTHO05D009058 5.6e-40 168.3 196 51.5
Eucgr.A02878 Eucalyptus grandis HOM05D007220 ORTHO05D009058 7.3e-40 167.9 200 52.5
Dinv28549 Davidia involucrata HOM05D007220 ORTHO05D009058 2.4e-38 162.9 206 50.5
FAN10G3220 Fragaria x ananassa HOM05D007220 ORTHO05D009058 4.0e-38 162.2 174 54.6
FAN06G4318 Fragaria x ananassa HOM05D007220 ORTHO05D009058 2.6e-37 159.5 175 54.3
GSVIVG01018558001 Vitis vinifera HOM05D007220 ORTHO05D009058 4.4e-37 158.7 176 54.0
FvH4_7g27960 Fragaria vesca HOM05D007220 ORTHO05D009058 5.8e-37 158.3 175 54.3
FAN06G0674 Fragaria x ananassa HOM05D007220 ORTHO05D009058 5.8e-37 158.3 175 53.1
MD01G1184500 Malus domestica HOM05D007220 ORTHO05D009058 5.8e-37 158.3 196 49.0
FAN03G0488 Fragaria x ananassa HOM05D007220 ORTHO05D009058 3.8e-36 155.6 175 52.6
FAN03G2818 Fragaria x ananassa HOM05D007220 ORTHO05D009058 3.8e-36 155.6 175 52.6
RcHm_v2.0_Chr1g0374911 Rosa chinensis HOM05D007220 ORTHO05D009058 6.4e-36 154.8 175 52.6
CiPaw.04G061800 Carya illinoinensis HOM05D007220 ORTHO05D009058 1.1e-35 154.1 203 46.3
FAN01G2832 Fragaria x ananassa HOM05D007220 ORTHO05D009058 1.4e-35 153.7 173 53.2
Gohir.D07G043100 Gossypium hirsutum HOM05D007220 ORTHO05D009058 1.9e-35 153.3 99 72.7
Nn4g26358 Nelumbo nucifera HOM05D007220 ORTHO05D009058 1.9e-35 153.3 200 47.0
vmacro09892 Vaccinium macrocarpon HOM05D007220 ORTHO05D009058 7.1e-35 151.4 205 48.8
Ciclev10005924m.g Citrus clementina HOM05D007220 ORTHO05D009058 9.3e-35 151.0 202 50.0
Dinv22967 Davidia involucrata HOM05D007220 ORTHO05D009058 9.3e-35 151.0 209 47.4
Actinidia25024 Actinidia chinensis HOM05D007220 ORTHO05D009058 1.2e-34 150.6 191 48.7
Cc02_g04040 Coffea canephora HOM05D007220 ORTHO05D009058 4.6e-34 148.7 140 60.0
Gohir.A07G038900 Gossypium hirsutum HOM05D007220 ORTHO05D009058 4.6e-34 148.7 189 46.6
QL09p019051 Quercus lobata HOM05D007220 ORTHO05D009058 3.9e-33 145.6 207 44.9
SGA_v2.0_scaffold2G01175 Striga asiatica HOM05D007220 ORTHO05D009058 3.9e-33 145.6 171 51.5
HanXRQChr08g0223851 Helianthus annuus HOM05D007220 ORTHO05D009058 5.1e-33 145.2 186 50.0
Potri.015G129600 Populus trichocarpa HOM05D007220 ORTHO05D009058 6.6e-33 144.8 194 49.0
Gorai.001G046100 Gossypium raimondii HOM05D007220 ORTHO05D009058 1.1e-32 144.1 189 45.5
AUR62016183 Chenopodium quinoa HOM05D007220 ORTHO05D009058 1.9e-32 143.3 201 45.3
Glyma.09G232600 Glycine max HOM05D007220 ORTHO05D009058 1.9e-32 143.3 154 51.3
SGA_v2.0_scaffold486G52391 Striga asiatica HOM05D007220 ORTHO05D009058 2.5e-32 142.9 194 48.5
MSTRG.27183 Avicennia marina HOM05D007220 ORTHO05D009058 7.3e-32 141.4 193 45.6
Sabra15G0142900 Salix brachista HOM05D007220 ORTHO05D009058 9.6e-32 141.0 192 47.9
Rhsim09G0192800 Rhododendron simsii HOM05D007220 ORTHO05D009058 2.1e-31 139.8 202 46.5
arahy.Tifrunner.gnm1.ann1.0IXC5E Arachis hypogaea HOM05D007220 ORTHO05D009058 2.8e-31 139.4 109 63.3
PGR042G1708 Punica granatum HOM05D007220 ORTHO05D009058 3.6e-31 139.0 197 44.2
SalBow4G2286 Salvia bowleyana HOM05D007220 ORTHO05D009058 5.3e-30 135.2 194 46.9
Sc19g0001910 Simmondsia chinensis HOM05D007220 ORTHO05D009058 6.9e-30 134.8 194 46.9
Atru.chr1.664 Acer truncatum HOM05D007220 ORTHO05D009058 1.5e-29 133.7 200 44.0
Lsat_1_v5_gn_8_9340 Lactuca sativa HOM05D007220 ORTHO05D009058 1.5e-29 133.7 192 47.4
CSS0026352 Camellia sinensis var. sinensis HOM05D007220 ORTHO05D009058 2.0e-29 133.3 98 67.3
Solyc03g083570.3 Solanum lycopersicum HOM05D007220 ORTHO05D009058 7.6e-29 131.3 198 46.0
Aqoxy7G00673 Aquilegia oxysepala HOM05D007220 ORTHO05D009058 1.3e-28 130.6 134 54.5
Nitab4.5_0000072g0560 Nicotiana tabacum HOM05D007220 ORTHO05D009058 1.3e-28 130.6 111 59.5
VMungo1127G0384 Vigna mungo HOM05D007220 ORTHO05D009058 1.3e-28 130.6 162 48.1
EL10Ac3g05813 Beta vulgaris HOM05D007220 ORTHO05D009058 1.7e-28 130.2 207 44.4
CAN.G152.17 Capsicum annuum HOM05D007220 ORTHO05D009058 1.7e-28 130.2 109 60.6
Nitab4.5_0001548g0050 Nicotiana tabacum HOM05D007220 ORTHO05D009058 2.2e-28 129.8 184 46.2
unitig_46.g18768 Utricularia gibba HOM05D007220 ORTHO05D009058 2.2e-28 129.8 184 46.2
Ca_30916_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 4.9e-28 128.6 152 50.7
Phvul.011G004500 Phaseolus vulgaris HOM05D007220 ORTHO05D009058 4.9e-28 128.6 176 46.6
Migut.F00451 Erythranthe guttata HOM05D007220 ORTHO05D009058 1.4e-27 127.1 101 63.4
CDE09G0763 Ceratophyllum demersum HOM05D007220 ORTHO05D009058 3.2e-27 125.9 189 40.7
Psat7g150000 Pisum sativum HOM05D007220 ORTHO05D009058 4.2e-27 125.6 184 43.5
Thhalv10015015m.g Eutrema salsugineum HOM05D007220 ORTHO05D009058 7.1e-27 124.8 116 64.7
Medtr4g035825 Medicago truncatula HOM05D007220 ORTHO05D009058 7.1e-27 124.8 194 43.8
Lj3g0016008 Lotus japonicus HOM05D007220 ORTHO05D009058 9.3e-27 124.4 153 50.3
Peaxi162Scf00241g00624 Petunia axillaris HOM05D007220 ORTHO05D009058 1.6e-26 123.6 132 52.3
Sopen03g023380 Solanum pennellii HOM05D007220 ORTHO05D009058 3.5e-26 122.5 110 57.3
ECA233G2338 Erigeron canadensis HOM05D007220 ORTHO05D009058 6.0e-26 121.7 157 50.3
Lj8A39T34 Lonicera japonica HOM05D007220 ORTHO05D009058 2.3e-25 119.8 191 41.9
Zm00001eb230760 Zea mays HOM05D007220 ORTHO05D009058 3.9e-25 119.0 145 51.7
PSO782G3417 Papaver somniferum HOM05D007220 ORTHO05D009058 1.5e-24 117.1 107 54.2
PSO478G4327 Papaver somniferum HOM05D007220 ORTHO05D009058 5.6e-24 115.2 107 53.3
SEGI_29714 Sequoiadendron giganteum HOM05D007220 ORTHO05D009058 1.3e-23 114.0 149 48.3
arahy.Tifrunner.gnm1.ann1.83G6QR Arachis hypogaea HOM05D007220 ORTHO05D009058 3.1e-22 109.4 83 63.9
HPP92_002073 Vanilla planifolia HOM05D007220 ORTHO05D009058 3.4e-21 105.9 206 34.5
TPR.G15117 Trifolium pratense HOM05D007220 ORTHO05D009058 1.1e-19 100.9 71 66.2
ATR0730G016 Amborella trichopoda HOM05D007220 ORTHO05D009058 3.2e-19 99.4 115 51.3
Prupe.2G280700 Prunus persica HOM05D007220 ORTHO05D009058 7.1e-19 98.2 147 44.9
Potri.012G128000 Populus trichocarpa HOM05D007220 ORTHO05D009058 7.9e-18 94.7 195 36.9
Sed0003033 Sechium edule HOM05D007220 ORTHO05D009058 7.9e-18 94.7 156 46.2
AUR62035102 Chenopodium quinoa HOM05D007220 ORTHO05D009058 1.1e-16 90.9 200 34.5
PGSC0003DMG400023001 Solanum tuberosum HOM05D007220 ORTHO05D009058 2.5e-16 89.7 177 35.0
MD07G1256600 Malus domestica HOM05D007220 ORTHO05D009058 5.3e-14 82.0 53 66.0
TAR629G2293 Trochodendron aralioides HOM05D007220 ORTHO05D009058 6.9e-14 81.6 151 35.8
Mapoly0002s0242 Marchantia polymorpha HOM05D007220 ORTHO05D009058 2.6e-13 79.7 77 48.1
Pp3c26_11240 Physcomitrium patens HOM05D007220 ORTHO05D009058 3.8e-12 75.9 126 43.7
AagrBONN_evm.TU.Sc2ySwM_228.5821 Anthoceros agrestis HOM05D007220 ORTHO05D009058 4.9e-12 75.5 151 35.1
DCAR_009422 Daucus carota HOM05D007220 ORTHO05D009058 4.9e-12 75.5 149 40.9
DCAR_009423 Daucus carota HOM05D007220 ORTHO05D009058 4.9e-12 75.5 149 40.9
HanXRQChr04g0107801 Helianthus annuus HOM05D000901 ORTHO05D001160 7.1e-11 71.6 141 41.1
Ca_20051_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 8.7e-09 64.7 110 41.8
MBI12_g14970_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 5.7e-08 62.0 53 56.6
MBI12_g25331_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 1.6e-07 60.5 56 53.6
MBI12_g20320_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 4.8e-07 58.9 179 31.8


User provided reference genes

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