Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G25260 Arabidopsis lyrata HOM05D005248 ORTHO05D006409 3.0e-102 375.2 186 100.0
AT5G51040 Arabidopsis thaliana HOM05D005248 ORTHO05D006409 1.2e-95 353.2 189 93.7
CARHR257090 Cardamine hirsuta HOM05D005248 ORTHO05D006409 4.8e-92 341.3 188 89.9
Carub.0008s1104 Capsella rubella HOM05D005248 ORTHO05D006409 8.4e-89 330.5 189 87.8
Sp6g13210 Schrenkiella parvula HOM05D005248 ORTHO05D006409 1.0e-86 323.6 188 85.6
A10p08030 Brassica napus HOM05D005248 ORTHO05D006409 5.1e-86 321.2 188 86.7
BraSC35t45996Z Brassica rapa HOM05D005248 ORTHO05D006409 6.7e-86 320.9 188 86.7
Thhalv10014773m.g Eutrema salsugineum HOM05D005248 ORTHO05D006409 2.1e-84 315.8 188 85.6
BcaB05g24022 Brassica carinata HOM05D005248 ORTHO05D006409 6.2e-84 314.3 188 84.6
BcaC03g14629 Brassica carinata HOM05D005248 ORTHO05D006409 1.2e-82 310.1 186 84.9
BolC9t56844H Brassica oleracea HOM05D005248 ORTHO05D006409 7.6e-82 307.4 189 83.6
A02p12520 Brassica napus HOM05D005248 ORTHO05D006409 8.4e-81 303.9 186 84.4
THA.LOC104825042 Tarenaya hassleriana HOM05D005248 ORTHO05D006409 3.2e-80 302.0 188 77.1
BolC2t08204H Brassica oleracea HOM05D005248 ORTHO05D006409 4.6e-79 298.1 195 81.0
C09p39650 Brassica napus HOM05D005248 ORTHO05D006409 1.8e-78 296.2 188 81.4
BraA02t06314Z Brassica rapa HOM05D005248 ORTHO05D006409 3.9e-78 295.0 193 80.8
Aa31LG3G7530 Aethionema arabicum HOM05D005248 ORTHO05D006409 1.3e-76 290.0 205 71.7
COL.COLO4_37271 Corchorus olitorius HOM05D005248 ORTHO05D006409 9.4e-64 247.3 183 66.7
TWI39G0330 Tripterygium wilfordii HOM05D005248 ORTHO05D006409 6.1e-63 244.6 182 66.5
Ciclev10032866m.g Citrus clementina HOM05D005248 ORTHO05D006409 1.0e-62 243.8 186 66.1
Cpa.g.sc13.186 Carica papaya HOM05D005248 ORTHO05D006409 1.4e-62 243.4 187 63.6
Thecc.03G142000 Theobroma cacao HOM05D005248 ORTHO05D006409 3.0e-62 242.3 187 65.2
CSS0031400 Camellia sinensis var. sinensis HOM05D005248 ORTHO05D006409 2.5e-61 239.2 184 64.7
Gohir.D07G050600 Gossypium hirsutum HOM05D005248 ORTHO05D006409 9.7e-61 237.3 187 63.1
Duzib205G1954 Durio zibethinus HOM05D005248 ORTHO05D006409 1.7e-60 236.5 187 63.6
Gorai.001G053700 Gossypium raimondii HOM05D005248 ORTHO05D006409 1.7e-60 236.5 187 63.1
TAR371G0926 Trochodendron aralioides HOM05D005248 ORTHO05D006409 6.3e-60 234.6 188 63.3
CANSAT78G1265 Cannabis sativa HOM05D005248 ORTHO05D006409 1.1e-59 233.8 193 61.7
Gohir.A07G046300 Gossypium hirsutum HOM05D005248 ORTHO05D006409 1.8e-59 233.0 187 62.6
CSS0027803 Camellia sinensis var. sinensis HOM05D005248 ORTHO05D006409 2.4e-59 232.6 184 64.1
Dinv13708 Davidia involucrata HOM05D005248 ORTHO05D006409 2.4e-59 232.6 186 66.1
QL10p000295 Quercus lobata HOM05D005248 ORTHO05D006409 6.9e-59 231.1 182 61.5
Nitab4.5_0000976g0180 Nicotiana tabacum HOM05D005248 ORTHO05D006409 2.0e-58 229.6 184 62.5
GSVIVG01005682001 Vitis vinifera HOM05D005248 ORTHO05D006409 2.0e-58 229.6 183 62.8
CAN.G1008.49 Capsicum annuum HOM05D005248 ORTHO05D006409 4.5e-58 228.4 185 62.2
Sopen03g037010 Solanum pennellii HOM05D005248 ORTHO05D006409 7.7e-58 227.6 184 62.0
Oeu017204.1 Olea europaea HOM05D005248 ORTHO05D006409 2.2e-57 226.1 177 60.5
PSO782G4423 Papaver somniferum HOM05D005248 ORTHO05D006409 5.0e-57 224.9 192 59.4
Phvul.009G158800 Phaseolus vulgaris HOM05D005248 ORTHO05D006409 5.0e-57 224.9 183 60.7
PSO063G1686 Papaver somniferum HOM05D005248 ORTHO05D006409 1.1e-56 223.8 195 59.5
MSTRG.22815 Avicennia marina HOM05D005248 ORTHO05D006409 1.4e-56 223.4 184 63.0
PGSC0003DMG400014171 Solanum tuberosum HOM05D005248 ORTHO05D006409 1.9e-56 223.0 184 60.3
Atru.chr6.1938 Acer truncatum HOM05D005248 ORTHO05D006409 2.5e-56 222.6 221 52.9
Aqoxy4G00470 Aquilegia oxysepala HOM05D005248 ORTHO05D006409 2.5e-56 222.6 180 60.6
Lj1g0011989 Lotus japonicus HOM05D005248 ORTHO05D006409 2.5e-56 222.6 183 58.5
Cfa018696 Carpinus fangiana HOM05D005248 ORTHO05D006409 3.2e-56 222.2 183 60.7
Rhsim08G0198900 Rhododendron simsii HOM05D005248 ORTHO05D006409 9.4e-56 220.7 185 60.5
SGA_v2.0_scaffold44G16640 Striga asiatica HOM05D005248 ORTHO05D006409 1.2e-55 220.3 141 72.3
Actinidia25510 Actinidia chinensis HOM05D005248 ORTHO05D006409 1.6e-55 219.9 184 61.4
C02p20620 Brassica napus HOM05D005248 ORTHO05D006409 1.6e-55 219.9 114 92.1
Oeu051184.1 Olea europaea HOM05D005248 ORTHO05D006409 1.6e-55 219.9 158 65.2
Potri.015G108300 Populus trichocarpa HOM05D005248 ORTHO05D006409 2.1e-55 219.5 183 60.7
Hma1.2p1_0452F.1_g155900 Hydrangea macrophylla HOM05D005248 ORTHO05D006409 2.7e-55 219.2 185 58.9
Aqoxy5G00839 Aquilegia oxysepala HOM05D005248 ORTHO05D006409 3.6e-55 218.8 186 59.7
Medtr3g098480 Medicago truncatula HOM05D005248 ORTHO05D006409 3.6e-55 218.8 189 61.4
SalBow1G4990 Salvia bowleyana HOM05D005248 ORTHO05D006409 4.7e-55 218.4 184 60.9
MD14G1145800 Malus domestica HOM05D005248 ORTHO05D006409 6.1e-55 218.0 184 59.8
Manes.14G043700 Manihot esculenta HOM05D005248 ORTHO05D006409 1.0e-54 217.2 185 57.8
Sabra12G0080100 Salix brachista HOM05D005248 ORTHO05D006409 1.0e-54 217.2 183 60.7
ECA247G0315 Erigeron canadensis HOM05D005248 ORTHO05D000263 1.4e-54 216.9 153 64.1
arahy.Tifrunner.gnm1.ann1.1UQX8S Arachis hypogaea HOM05D005248 ORTHO05D006409 2.3e-54 216.1 129 74.4
Sc14g0003150 Simmondsia chinensis HOM05D005248 ORTHO05D006409 2.3e-54 216.1 130 77.7
PGR119G0545 Punica granatum HOM05D005248 ORTHO05D006409 3.0e-54 215.7 188 60.6
SGA_v2.0_scaffold37G14670 Striga asiatica HOM05D005248 ORTHO05D006409 3.0e-54 215.7 141 70.2
Sed0027310 Sechium edule HOM05D005248 ORTHO05D006409 3.9e-54 215.3 193 57.0
Glyma.04G202600 Glycine max HOM05D005248 ORTHO05D006409 6.7e-54 214.5 185 59.5
HanXRQChr02g0034361 Helianthus annuus HOM05D005248 ORTHO05D006409 6.7e-54 214.5 192 55.7
AUR62043379 Chenopodium quinoa HOM05D005248 ORTHO05D006409 1.5e-53 213.4 130 75.4
arahy.Tifrunner.gnm1.ann1.4X1L65 Arachis hypogaea HOM05D005248 ORTHO05D006409 2.0e-53 213.0 129 73.6
unitig_61.g26221 Utricularia gibba HOM05D005248 ORTHO05D006409 2.6e-53 212.6 171 61.4
AUR62043864 Chenopodium quinoa HOM05D005248 ORTHO05D006409 3.3e-53 212.2 130 74.6
EL10Ac5g11271 Beta vulgaris HOM05D005248 ORTHO05D006409 4.4e-53 211.8 186 58.1
CsaV3_2G009360 Cucumis sativus L. HOM05D005248 ORTHO05D006409 5.7e-53 211.5 170 58.8
DCAR_025638 Daucus carota HOM05D005248 ORTHO05D006409 7.4e-53 211.1 189 58.2
Peaxi162Scf00314g00750 Petunia axillaris HOM05D005248 ORTHO05D006409 7.4e-53 211.1 183 59.6
Hund10025 Selenicereus undatus HOM05D005248 ORTHO05D006409 7.4e-53 211.1 185 57.3
Lj5A86T66 Lonicera japonica HOM05D005248 ORTHO05D006409 1.3e-52 210.3 182 56.6
Cc04_g05750 Coffea canephora HOM05D005248 ORTHO05D006409 1.7e-52 209.9 184 58.2
MELO3C008773.2 Cucumis melo HOM05D005248 ORTHO05D006409 1.7e-52 209.9 194 53.1
VMungo0251G2692 Vigna mungo HOM05D005248 ORTHO05D006409 1.7e-52 209.9 138 68.1
Nn3g16250 Nelumbo nucifera HOM05D005248 ORTHO05D006409 2.2e-52 209.5 181 58.0
Prupe.5G140100 Prunus persica HOM05D005248 ORTHO05D006409 2.2e-52 209.5 183 57.4
arahy.Tifrunner.gnm1.ann1.JK6BKQ Arachis hypogaea HOM05D005248 ORTHO05D006409 2.8e-52 209.1 183 57.9
FAN04G2277 Fragaria x ananassa HOM05D005248 ORTHO05D006409 3.7e-52 208.8 183 57.4
Glyma.06G162900 Glycine max HOM05D005248 ORTHO05D006409 3.7e-52 208.8 185 58.4
MD06G1128800 Malus domestica HOM05D005248 ORTHO05D006409 3.7e-52 208.8 183 57.4
RcHm_v2.0_Chr7g0188501 Rosa chinensis HOM05D005248 ORTHO05D006409 3.7e-52 208.8 183 57.9
AUR62032207 Chenopodium quinoa HOM05D005248 ORTHO05D006409 6.3e-52 208.0 187 58.8
Nitab4.5_0012624g0030 Nicotiana tabacum HOM05D005248 ORTHO05D006409 6.3e-52 208.0 145 69.0
Hund02516 Selenicereus undatus HOM05D005248 ORTHO05D006409 8.2e-52 207.6 183 58.5
arahy.Tifrunner.gnm1.ann1.X29WZH Arachis hypogaea HOM05D005248 ORTHO05D006409 1.1e-51 207.2 183 57.9
FvH4_5g09730 Fragaria vesca HOM05D005248 ORTHO05D006409 1.1e-51 207.2 183 56.3
FAN13G2612 Fragaria x ananassa HOM05D005248 ORTHO05D006409 1.4e-51 206.8 183 56.3
Lsat_1_v5_gn_1_30140 Lactuca sativa HOM05D005248 ORTHO05D006409 1.4e-51 206.8 185 55.7
ClCG11G000550 Citrullus lanatus HOM05D005248 ORTHO05D006409 1.8e-51 206.5 201 52.7
FAN18G0065 Fragaria x ananassa HOM05D005248 ORTHO05D006409 2.4e-51 206.1 183 56.3
FAN08G1048 Fragaria x ananassa HOM05D005248 ORTHO05D006409 4.1e-51 205.3 183 55.7
Psat7g039840 Pisum sativum HOM05D005248 ORTHO05D006409 4.1e-51 205.3 137 68.6
Ah.11g047000 Amaranthus hybridus HOM05D005248 ORTHO05D006409 5.3e-51 204.9 186 57.0
Atru.chr10.902 Acer truncatum HOM05D005248 ORTHO05D006409 7.0e-51 204.5 147 64.6
Migut.I00662 Erythranthe guttata HOM05D005248 ORTHO05D006409 7.0e-51 204.5 135 71.1
Haze_07087 Corylus avellana HOM05D005248 ORTHO05D006409 2.0e-50 203.0 224 50.4
Eucgr.H01475 Eucalyptus grandis HOM05D005248 ORTHO05D006409 2.6e-50 202.6 192 53.6
Lalb_Chr12g0202581 Lupinus albus HOM05D005248 ORTHO05D006409 5.9e-50 201.4 129 72.1
vmacro19110 Vaccinium macrocarpon HOM05D005248 ORTHO05D006409 7.7e-50 201.1 184 57.1
vmacro16762 Vaccinium macrocarpon HOM05D005248 ORTHO05D006409 2.2e-49 199.5 151 64.2
Medtr8g096070 Medicago truncatula HOM05D005248 ORTHO05D006409 1.4e-48 196.8 186 51.6
Zm00001eb198100 Zea mays HOM05D005248 ORTHO05D006409 2.5e-48 196.1 185 53.0
Ca_16820_v3 Cicer arietinum L. HOM05D000402 ORTHO05D000263 3.2e-48 195.7 134 67.2
ATR0582G036 Amborella trichopoda HOM05D005248 ORTHO05D006409 8.0e-47 191.0 129 69.8
vmacro19116 Vaccinium macrocarpon HOM05D000402 ORTHO05D000263 1.0e-46 190.7 182 54.4
CDE06G0011 Ceratophyllum demersum HOM05D005248 ORTHO05D006409 1.4e-46 190.3 183 53.6
Lj9C488G13 Lonicera japonica HOM05D005248 ORTHO05D006409 1.4e-46 190.3 115 72.2
Os11g0528300 Oryza sativa ssp. japonica HOM05D005248 ORTHO05D006409 1.4e-46 190.3 129 69.0
CiPaw.12G000300 Carya illinoinensis HOM05D005248 ORTHO05D006409 1.8e-46 189.9 164 57.9
Sabra15G0130900 Salix brachista HOM05D001551 ORTHO05D000263 3.0e-46 189.1 246 44.7
HPP92_006440 Vanilla planifolia HOM05D005248 ORTHO05D006409 2.0e-45 186.4 131 67.2
Glyma.08G007100 Glycine max HOM05D005248 ORTHO05D006409 2.6e-45 186.0 136 64.7
CSS0028005 Camellia sinensis var. sinensis HOM05D005248 ORTHO05D006409 2.8e-44 182.6 154 58.4
PSO541G2841 Papaver somniferum HOM05D005248 ORTHO05D006409 3.7e-44 182.2 128 69.5
Nitab4.5_0010893g0020 Nicotiana tabacum HOM05D005248 ORTHO05D006409 1.1e-43 180.6 159 60.4
Sabra15G0128600 Salix brachista HOM05D005248 ORTHO05D006409 3.1e-43 179.1 270 40.7
Lsat_1_v5_gn_9_37901 Lactuca sativa HOM05D005248 ORTHO05D006409 7.2e-40 167.9 147 55.8
SMO146G0118 Selaginella moellendorffii HOM05D005248 ORTHO05D006409 4.8e-36 155.2 123 57.7
Mapoly0022s0036 Marchantia polymorpha HOM05D005248 ORTHO05D006409 5.3e-35 151.8 124 54.8
Gohir.A07G044532 Gossypium hirsutum HOM05D005248 ORTHO05D006409 7.7e-34 147.9 87 72.4
Pp3c16_25170 Physcomitrium patens HOM05D005248 ORTHO05D006409 4.2e-32 142.1 125 48.8
BcaC04g20744 Brassica carinata HOM05D005248 ORTHO05D006409 7.2e-32 141.4 72 90.3
Rhsim12G0181600 Rhododendron simsii HOM05D005248 ORTHO05D006409 7.2e-32 141.4 91 70.3
PSO675G1946 Papaver somniferum HOM05D005248 ORTHO05D006409 1.4e-30 137.1 80 80.0
Gohir.A11G038833 Gossypium hirsutum HOM05D005248 ORTHO05D006409 4.4e-29 132.1 86 68.6
Lj4g0025558 Lotus japonicus HOM05D005248 ORTHO05D006409 2.8e-28 129.4 130 53.8
Cre12.g550750 Chlamydomonas reinhardtii HOM05D005248 ORTHO05D006409 1.8e-27 126.7 116 52.6
Zm00001eb113310 Zea mays HOM05D005248 ORTHO05D006409 5.4e-27 125.2 79 67.1
Nitab4.5_0002540g0030 Nicotiana tabacum HOM05D005248 ORTHO05D006409 2.1e-23 113.2 132 50.8
TPR.G12753 Trifolium pratense HOM05D005248 ORTHO05D006409 6.1e-23 111.7 72 65.3
QL10p017282 Quercus lobata HOM05D005248 ORTHO05D006409 3.0e-22 109.4 65 70.8
MCO01G238 Micromonas commoda HOM05D005248 ORTHO05D006409 1.7e-20 103.6 103 44.7
TPR.G20580 Trifolium pratense HOM05D005248 ORTHO05D006409 1.6e-18 97.1 111 49.5
CAN.G412.4 Capsicum annuum HOM05D005248 ORTHO05D006409 1.3e-17 94.0 59 67.8
PRCOL_00003706 Prasinoderma coloniale HOM05D005248 ORTHO05D006409 2.3e-17 93.2 174 31.0
Gorai.007G045300 Gossypium raimondii HOM05D005248 ORTHO05D006409 3.4e-13 79.3 90 48.9
TPR.G21935 Trifolium pratense HOM05D005248 ORTHO05D006409 1.2e-07 60.8 35 74.3
AagrBONN_evm.TU.Sc2ySwM_368.2623 Anthoceros agrestis HOM05D005248 ORTHO05D006409 1.4e-06 57.4 52 48.1


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