Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G24050 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 3.4e-89 331.6 167 100.0
AT5G50060 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 1.6e-78 296.2 167 87.4
Carub.0008s1001 Capsella rubella HOM05D007751 ORTHO05D009813 1.2e-75 286.6 167 86.2
CARHR258620 Cardamine hirsuta HOM05D007751 ORTHO05D009813 8.4e-48 194.1 167 62.9
Carub.0008s1007 Capsella rubella HOM05D007751 ORTHO05D009813 1.1e-44 183.7 167 55.7
A10p08560 Brassica napus HOM05D007751 ORTHO05D009813 2.6e-41 172.6 164 55.5
BraSC37t46147Z Brassica rapa HOM05D007751 ORTHO05D009813 5.9e-41 171.4 164 54.9
AT5G50030 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 1.0e-40 170.6 163 55.8
Aa31sc47G40 Aethionema arabicum HOM05D007751 ORTHO05D009813 8.5e-40 167.5 164 53.7
Sp6g11920 Schrenkiella parvula HOM05D007751 ORTHO05D009813 1.1e-39 167.2 167 50.9
AL8G24030 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 1.9e-39 166.4 164 54.3
AL8G24070 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 3.2e-39 165.6 163 53.4
Thhalv10014776m.g Eutrema salsugineum HOM05D007751 ORTHO05D009813 3.2e-39 165.6 164 52.4
CARHR258630 Cardamine hirsuta HOM05D007751 ORTHO05D009813 4.2e-39 165.2 163 54.0
Carub.0002s0822 Capsella rubella HOM05D007751 ORTHO05D009813 1.0e-37 160.6 169 50.9
Sp6g11910 Schrenkiella parvula HOM05D007751 ORTHO05D009813 3.0e-37 159.1 167 51.5
Thhalv10015309m.g Eutrema salsugineum HOM05D007751 ORTHO05D009813 2.5e-36 156.0 168 50.0
BcaC01g04833 Brassica carinata HOM05D007751 ORTHO05D009813 1.7e-35 153.3 164 51.2
AL8G24060 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 4.8e-35 151.8 172 48.8
Carub.0008s0996 Capsella rubella HOM05D007751 ORTHO05D009813 4.8e-35 151.8 169 47.9
C03p16960 Brassica napus HOM05D007751 ORTHO05D009813 1.4e-34 150.2 161 50.3
C03p33340 Brassica napus HOM05D007751 ORTHO05D009813 1.4e-34 150.2 164 50.0
Carub.0008s0995 Capsella rubella HOM05D007751 ORTHO05D009813 1.4e-34 150.2 169 49.1
BolC9t56709H Brassica oleracea HOM05D007751 ORTHO05D009813 1.8e-34 149.8 153 54.9
Sp6g11860 Schrenkiella parvula HOM05D007751 ORTHO05D009813 1.8e-34 149.8 164 49.4
BraA03t10746Z Brassica rapa HOM05D007751 ORTHO05D009813 5.3e-34 148.3 161 49.7
AT5G50040 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 9.1e-34 147.5 167 49.1
CARHR257930 Cardamine hirsuta HOM05D007751 ORTHO05D009813 1.5e-33 146.7 167 49.1
AL8G24040 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 3.4e-33 145.6 171 48.5
A04p13370 Brassica napus HOM05D007751 ORTHO05D009813 3.4e-33 145.6 167 46.1
BcaB01g04307 Brassica carinata HOM05D007751 ORTHO05D009813 4.5e-33 145.2 161 48.4
BcaC01g06316 Brassica carinata HOM05D007751 ORTHO05D009813 4.5e-33 145.2 161 48.4
BolC3t14109H Brassica oleracea HOM05D007751 ORTHO05D009813 4.5e-33 145.2 161 48.4
BraA04t16992Z Brassica rapa HOM05D007751 ORTHO05D009813 4.5e-33 145.2 167 45.5
AT5G50070 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 7.7e-33 144.4 172 48.3
Carub.0008s0994 Capsella rubella HOM05D007751 ORTHO05D009813 7.7e-33 144.4 164 48.8
Aa31sc47G80 Aethionema arabicum HOM05D007751 ORTHO05D009813 1.0e-32 144.1 154 46.8
A03p14510 Brassica napus HOM05D007751 ORTHO05D009813 1.0e-32 144.1 161 48.4
C04p47120 Brassica napus HOM05D007751 ORTHO05D009813 1.3e-32 143.7 167 45.5
BolC4t26306H Brassica oleracea HOM05D007751 ORTHO05D009813 2.2e-32 142.9 167 44.9
CARHR258610 Cardamine hirsuta HOM05D007751 ORTHO05D009813 5.0e-32 141.7 167 47.3
Sp6g11880 Schrenkiella parvula HOM05D007751 ORTHO05D009813 1.1e-31 140.6 164 47.0
AT1G54980 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 1.4e-31 140.2 170 47.6
Carub.0008s1000 Capsella rubella HOM05D007751 ORTHO05D009813 1.9e-31 139.8 168 47.6
Carub.0008s0998 Capsella rubella HOM05D007751 ORTHO05D009813 3.2e-31 139.0 167 45.5
AT5G50050 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 6.1e-30 134.8 161 47.8
AT4G24640 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 2.0e-28 129.8 163 42.9
CARHR284460 Cardamine hirsuta HOM05D007751 ORTHO05D009813 2.0e-28 129.8 170 40.6
Thhalv10026329m.g Eutrema salsugineum HOM05D007751 ORTHO05D009813 4.4e-28 128.6 163 42.9
AL7G28560 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 5.7e-28 128.3 163 42.3
Carub.0007s1642 Capsella rubella HOM05D007751 ORTHO05D009813 2.2e-27 126.3 163 41.1
Carub.0008s1002 Capsella rubella HOM05D007751 ORTHO05D009813 2.8e-27 125.9 172 44.8
Carub.0008s0997 Capsella rubella HOM05D007751 ORTHO05D009813 6.3e-27 124.8 167 43.1
THA.LOC104799810 Tarenaya hassleriana HOM05D007751 ORTHO05D009813 8.2e-27 124.4 170 40.6
C09p38520 Brassica napus HOM05D007751 ORTHO05D009813 2.4e-26 122.9 119 55.5
Aa31sc47G50 Aethionema arabicum HOM05D007751 ORTHO05D009813 2.0e-25 119.8 170 40.6
Sp7g22630 Schrenkiella parvula HOM05D007751 ORTHO05D009813 3.4e-25 119.0 163 39.3
CARHR232030 Cardamine hirsuta HOM05D007751 ORTHO05D009813 4.5e-25 118.6 163 38.7
Carub.0002s0821 Capsella rubella HOM05D007751 ORTHO05D009813 1.3e-24 117.1 167 44.9
AL1G65530 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 1.7e-24 116.7 141 46.1
Carub.0008s0999 Capsella rubella HOM05D007751 ORTHO05D009813 2.2e-24 116.3 165 43.0
BcaNung04957 Brassica carinata HOM05D007751 ORTHO05D009813 8.5e-24 114.4 163 38.7
THA.LOC104800050 Tarenaya hassleriana HOM05D007751 ORTHO05D009813 3.2e-23 112.5 144 40.3
C01p19970 Brassica napus HOM05D007751 ORTHO05D009813 8.0e-22 107.8 163 38.7
BolC1t01925H Brassica oleracea HOM05D007751 ORTHO05D009813 1.0e-21 107.5 163 38.7
BcaC09g50845 Brassica carinata HOM05D007751 ORTHO05D009813 1.8e-21 106.7 163 38.0
BraA01t01533Z Brassica rapa HOM05D007751 ORTHO05D009813 2.3e-21 106.3 163 38.0
C02p25780 Brassica napus HOM05D007751 ORTHO05D009813 6.7e-21 104.8 165 41.2
A01p15990 Brassica napus HOM05D007751 ORTHO05D009813 2.0e-20 103.2 163 37.4
BolC2t08647H Brassica oleracea HOM05D007751 ORTHO05D009813 3.3e-20 102.4 151 41.7
BraA02t06621Z Brassica rapa HOM05D007751 ORTHO05D009813 3.3e-20 102.4 165 40.6
Carub.0002s0820 Capsella rubella HOM05D007751 ORTHO05D009813 2.8e-19 99.4 167 35.3
BraA01t01929Z Brassica rapa HOM05D007751 ORTHO05D009813 3.7e-19 99.0 164 37.8
Carub.0008s1006 Capsella rubella HOM05D007751 ORTHO05D009813 3.7e-19 99.0 173 37.0
A01p20050 Brassica napus HOM05D007751 ORTHO05D009813 1.4e-18 97.1 170 37.1
Carub.0008s1005 Capsella rubella HOM05D007751 ORTHO05D009813 1.4e-18 97.1 173 36.4
C02p26100 Brassica napus HOM05D007751 ORTHO05D009813 1.8e-18 96.7 164 37.8
BolC2t08679H Brassica oleracea HOM05D007751 ORTHO05D009813 1.8e-18 96.7 164 37.8
A02p15670 Brassica napus HOM05D007751 ORTHO05D009813 3.1e-18 95.9 164 37.8
BraA02t06629Z Brassica rapa HOM05D007751 ORTHO05D009813 3.1e-18 95.9 164 37.8
BcaC03g15060 Brassica carinata HOM05D007751 ORTHO05D009813 9.1e-18 94.4 153 38.6
Aa31LG4G9710 Aethionema arabicum HOM05D007751 ORTHO05D009813 3.5e-17 92.4 112 42.0
BcaC07g38163 Brassica carinata HOM05D007751 ORTHO05D009813 1.0e-16 90.9 105 47.6
A08p21410 Brassica napus HOM05D007751 ORTHO05D009813 2.7e-14 82.8 111 41.4
BolC8t48582H Brassica oleracea HOM05D007751 ORTHO05D009813 1.4e-13 80.5 108 44.4
Carub.0008s1004 Capsella rubella HOM05D007751 ORTHO05D009813 1.5e-12 77.0 136 37.5
Carub.0008s1003 Capsella rubella HOM05D007751 ORTHO05D009813 3.7e-11 72.4 163 33.7
MD10G1032600 Malus domestica HOM05D004894 ORTHO05D005689 2.9e-08 62.8 111 31.5
Prupe.8G038100 Prunus persica HOM05D004894 ORTHO05D005689 3.8e-08 62.4 112 29.5
BcaB01g02924 Brassica carinata HOM05D007751 ORTHO05D009813 5.0e-08 62.0 59 49.2
FAN24G3270 Fragaria x ananassa HOM05D004894 ORTHO05D005689 6.5e-08 61.6 112 28.6
FvH4_2g13220 Fragaria vesca HOM05D004894 ORTHO05D005689 1.1e-07 60.8 112 28.6
A02p15600 Brassica napus HOM05D007751 ORTHO05D009813 2.5e-07 59.7 114 35.1
Manes.02G182301 Manihot esculenta HOM05D004894 ORTHO05D005689 2.5e-07 59.7 120 31.7
BolC4t26309H Brassica oleracea HOM05D007751 ORTHO05D009813 4.2e-07 58.9 67 47.8
Lalb_Chr03g0035461 Lupinus albus HOM05D004894 ORTHO05D005689 4.2e-07 58.9 96 31.2
Psat7g222760 Pisum sativum HOM05D004894 ORTHO05D005689 7.2e-07 58.2 152 28.3
FAN20G3174 Fragaria x ananassa HOM05D004894 ORTHO05D005689 9.4e-07 57.8 112 32.1
MD10G1032700 Malus domestica HOM05D004894 ORTHO05D005689 1.2e-06 57.4 136 24.3
Lalb_Chr03g0035551 Lupinus albus HOM05D004894 ORTHO05D005689 1.6e-06 57.0 113 31.0
Haze_17791 Corylus avellana HOM05D004894 ORTHO05D009560 2.1e-06 56.6 106 28.3
Medtr4g062290 Medicago truncatula HOM05D004894 ORTHO05D005689 2.7e-06 56.2 109 30.3


User provided reference genes

Program Settings