Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G24040 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 1.5e-87 326.2 180 100.0
AT5G50040 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 3.8e-70 268.5 180 85.0
CARHR258610 Cardamine hirsuta HOM05D007751 ORTHO05D009813 3.1e-56 222.2 180 70.6
Carub.0008s0995 Capsella rubella HOM05D007751 ORTHO05D009813 5.3e-56 221.5 182 72.5
CARHR257930 Cardamine hirsuta HOM05D007751 ORTHO05D009813 5.9e-55 218.0 177 68.9
Thhalv10015309m.g Eutrema salsugineum HOM05D007751 ORTHO05D009813 7.2e-53 211.1 180 71.1
Carub.0008s0996 Capsella rubella HOM05D007751 ORTHO05D009813 1.1e-50 203.8 182 65.9
Sp6g11910 Schrenkiella parvula HOM05D007751 ORTHO05D009813 3.7e-49 198.7 180 68.3
Carub.0008s1000 Capsella rubella HOM05D007751 ORTHO05D009813 4.5e-47 191.8 181 62.4
C04p47120 Brassica napus HOM05D007751 ORTHO05D009813 1.3e-46 190.3 180 65.0
BolC4t26306H Brassica oleracea HOM05D007751 ORTHO05D009813 2.2e-46 189.5 180 64.4
A04p13370 Brassica napus HOM05D007751 ORTHO05D009813 2.9e-46 189.1 180 64.4
BraA04t16992Z Brassica rapa HOM05D007751 ORTHO05D009813 2.9e-46 189.1 180 64.4
Carub.0008s0998 Capsella rubella HOM05D007751 ORTHO05D009813 3.6e-44 182.2 182 61.5
AT5G50050 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 4.0e-43 178.7 177 59.3
Carub.0008s0997 Capsella rubella HOM05D007751 ORTHO05D009813 8.8e-43 177.6 180 58.9
Carub.0008s1007 Capsella rubella HOM05D007751 ORTHO05D009813 9.7e-42 174.1 183 59.6
AL8G24070 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 2.8e-41 172.6 178 60.1
Carub.0008s0999 Capsella rubella HOM05D007751 ORTHO05D009813 5.3e-40 168.3 174 59.2
C03p33340 Brassica napus HOM05D007751 ORTHO05D009813 9.1e-40 167.5 177 57.6
Sp6g11920 Schrenkiella parvula HOM05D007751 ORTHO05D009813 2.7e-39 166.0 183 55.2
BraA03t10746Z Brassica rapa HOM05D007751 ORTHO05D009813 4.5e-39 165.2 174 58.0
BcaC01g04833 Brassica carinata HOM05D007751 ORTHO05D009813 5.9e-39 164.9 177 57.1
BcaB01g04307 Brassica carinata HOM05D007751 ORTHO05D009813 2.2e-38 162.9 174 57.5
BcaC01g06316 Brassica carinata HOM05D007751 ORTHO05D009813 2.2e-38 162.9 174 57.5
BolC3t14109H Brassica oleracea HOM05D007751 ORTHO05D009813 2.2e-38 162.9 174 57.5
C03p16960 Brassica napus HOM05D007751 ORTHO05D009813 3.8e-38 162.2 174 57.5
A03p14510 Brassica napus HOM05D007751 ORTHO05D009813 8.5e-38 161.0 174 56.9
Sp6g11880 Schrenkiella parvula HOM05D007751 ORTHO05D009813 6.1e-36 154.8 177 54.8
Thhalv10014776m.g Eutrema salsugineum HOM05D007751 ORTHO05D009813 4.0e-35 152.1 180 54.4
BraSC37t46147Z Brassica rapa HOM05D007751 ORTHO05D009813 9.8e-34 147.5 179 53.1
Carub.0008s1001 Capsella rubella HOM05D007751 ORTHO05D009813 9.8e-34 147.5 182 50.0
A10p08560 Brassica napus HOM05D007751 ORTHO05D009813 1.3e-33 147.1 179 53.1
AL8G24030 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 2.8e-33 146.0 180 54.4
AT5G50030 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 3.7e-33 145.6 179 54.2
CARHR258630 Cardamine hirsuta HOM05D007751 ORTHO05D009813 4.8e-33 145.2 180 52.8
Carub.0008s0994 Capsella rubella HOM05D007751 ORTHO05D009813 1.0e-30 137.5 178 52.8
AL8G24060 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 1.3e-30 137.1 188 48.4
Aa31sc47G40 Aethionema arabicum HOM05D007751 ORTHO05D009813 1.5e-29 133.7 180 50.0
Aa31sc47G80 Aethionema arabicum HOM05D007751 ORTHO05D009813 1.9e-29 133.3 159 49.7
Sp6g11860 Schrenkiella parvula HOM05D007751 ORTHO05D009813 7.2e-29 131.3 180 49.4
AL8G24050 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 9.5e-29 131.0 171 48.5
Carub.0008s1002 Capsella rubella HOM05D007751 ORTHO05D009813 1.6e-28 130.2 188 47.3
AT5G50070 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 2.8e-28 129.4 188 45.7
Carub.0002s0822 Capsella rubella HOM05D007751 ORTHO05D009813 2.8e-28 129.4 185 46.5
CARHR284460 Cardamine hirsuta HOM05D007751 ORTHO05D009813 1.0e-27 127.5 185 44.3
AT1G54980 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 1.8e-27 126.7 176 49.4
AT5G50060 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 1.8e-27 126.7 171 46.2
BolC9t56709H Brassica oleracea HOM05D007751 ORTHO05D009813 5.7e-26 121.7 166 50.0
Carub.0007s1642 Capsella rubella HOM05D007751 ORTHO05D009813 1.1e-24 117.5 180 45.0
Thhalv10026329m.g Eutrema salsugineum HOM05D007751 ORTHO05D009813 1.4e-24 117.1 180 44.4
AL1G65530 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 2.4e-24 116.3 145 50.3
AT4G24640 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 2.4e-24 116.3 180 43.9
AL7G28560 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 3.1e-24 115.9 180 43.3
THA.LOC104799810 Tarenaya hassleriana HOM05D007751 ORTHO05D009813 3.1e-24 115.9 182 41.8
Carub.0008s1005 Capsella rubella HOM05D007751 ORTHO05D009813 1.5e-21 107.1 188 41.5
Carub.0008s1006 Capsella rubella HOM05D007751 ORTHO05D009813 3.3e-21 105.9 188 42.6
Sp7g22630 Schrenkiella parvula HOM05D007751 ORTHO05D009813 3.3e-21 105.9 180 40.6
CARHR232030 Cardamine hirsuta HOM05D007751 ORTHO05D009813 1.2e-20 104.0 180 38.3
Carub.0002s0821 Capsella rubella HOM05D007751 ORTHO05D009813 1.8e-19 100.1 178 41.6
THA.LOC104800050 Tarenaya hassleriana HOM05D007751 ORTHO05D009813 5.2e-19 98.6 179 39.1
Aa31sc47G50 Aethionema arabicum HOM05D007751 ORTHO05D009813 1.5e-18 97.1 152 42.1
BcaNung04957 Brassica carinata HOM05D007751 ORTHO05D009813 2.0e-18 96.7 180 40.6
C09p38520 Brassica napus HOM05D007751 ORTHO05D009813 2.0e-18 96.7 124 51.6
CARHR258620 Cardamine hirsuta HOM05D007751 ORTHO05D009813 6.4e-17 91.7 183 38.8
C02p25780 Brassica napus HOM05D007751 ORTHO05D009813 3.2e-16 89.4 181 39.8
Aa31LG4G9710 Aethionema arabicum HOM05D007751 ORTHO05D009813 5.4e-16 88.6 111 45.0
BraA02t06621Z Brassica rapa HOM05D007751 ORTHO05D009813 7.0e-16 88.2 181 40.3
BolC1t01925H Brassica oleracea HOM05D007751 ORTHO05D009813 1.6e-15 87.0 180 38.9
BcaC09g50845 Brassica carinata HOM05D007751 ORTHO05D009813 2.0e-15 86.7 180 38.3
BraA01t01533Z Brassica rapa HOM05D007751 ORTHO05D009813 4.6e-15 85.5 180 38.3
C01p19970 Brassica napus HOM05D007751 ORTHO05D009813 5.9e-15 85.1 180 38.3
Carub.0002s0820 Capsella rubella HOM05D007751 ORTHO05D009813 5.9e-15 85.1 183 35.0
A08p21410 Brassica napus HOM05D007751 ORTHO05D009813 2.3e-14 83.2 110 43.6
A01p15990 Brassica napus HOM05D007751 ORTHO05D009813 3.9e-14 82.4 180 37.8
BcaC07g38163 Brassica carinata HOM05D007751 ORTHO05D009813 8.6e-14 81.3 105 45.7
BolC2t08647H Brassica oleracea HOM05D007751 ORTHO05D009813 9.5e-13 77.8 154 38.3
Carub.0008s1003 Capsella rubella HOM05D007751 ORTHO05D009813 8.9e-11 71.2 190 34.7
BolC8t48582H Brassica oleracea HOM05D007751 ORTHO05D009813 1.2e-10 70.9 108 42.6
Carub.0008s1004 Capsella rubella HOM05D007751 ORTHO05D009813 2.6e-10 69.7 145 37.2
BolC4t26309H Brassica oleracea HOM05D007751 ORTHO05D009813 7.5e-10 68.2 78 61.5
BcaB01g02924 Brassica carinata HOM05D007751 ORTHO05D009813 1.7e-09 67.0 58 58.6
A01p20050 Brassica napus HOM05D007751 ORTHO05D009813 2.9e-09 66.2 186 34.9
BraA01t01929Z Brassica rapa HOM05D007751 ORTHO05D009813 3.7e-09 65.9 186 34.9
BolC2t08679H Brassica oleracea HOM05D007751 ORTHO05D009813 8.3e-09 64.7 186 34.9
C02p26100 Brassica napus HOM05D007751 ORTHO05D009813 2.4e-08 63.2 186 34.4
A02p15670 Brassica napus HOM05D007751 ORTHO05D009813 4.1e-08 62.4 186 34.4
BraA02t06629Z Brassica rapa HOM05D007751 ORTHO05D009813 4.1e-08 62.4 186 34.4
BcaC03g15060 Brassica carinata HOM05D007751 ORTHO05D009813 5.4e-08 62.0 157 33.8


User provided reference genes

Program Settings