Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G23820 Arabidopsis lyrata HOM05D006009 ORTHO05D007389 0.0e+00 1348.6 727 100.0
AT5G49880 Arabidopsis thaliana HOM05D006009 ORTHO05D007389 0.0e+00 1278.1 727 95.0
Carub.0008s0974 Capsella rubella HOM05D006009 ORTHO05D007389 0.0e+00 1193.7 727 89.1
CARHR258850 Cardamine hirsuta HOM05D006009 ORTHO05D007389 0.0e+00 1163.7 727 87.2
Thhalv10012797m.g Eutrema salsugineum HOM05D006009 ORTHO05D007389 0.0e+00 1145.6 728 85.6
Sp6g11340 Schrenkiella parvula HOM05D006009 ORTHO05D007389 0.0e+00 1140.2 727 85.1
BcaB08g35360 Brassica carinata HOM05D006009 ORTHO05D007389 0.0e+00 1113.6 728 83.9
BraSC37t46134Z Brassica rapa HOM05D006009 ORTHO05D007389 0.0e+00 1099.3 730 83.6
A10p08680 Brassica napus HOM05D006009 ORTHO05D007389 0.0e+00 1087.8 730 82.9
BcaC04g20834 Brassica carinata HOM05D006009 ORTHO05D007389 5.4e-309 1063.9 728 81.2
C09p38660 Brassica napus HOM05D006009 ORTHO05D007389 6.6e-307 1057.0 730 81.1
BolC9t56722H Brassica oleracea HOM05D006009 ORTHO05D007389 6.6e-307 1057.0 730 81.1
THA.LOC104806651 Tarenaya hassleriana HOM05D006009 ORTHO05D007389 1.1e-293 1013.1 729 76.7
Aa31sc62G20 Aethionema arabicum HOM05D006009 ORTHO05D007389 2.7e-284 981.9 728 75.5
Atru.chr6.240 Acer truncatum HOM05D006009 ORTHO05D007389 9.7e-258 893.6 729 67.2
QL02p103325 Quercus lobata HOM05D006009 ORTHO05D007389 4.8e-257 891.3 725 66.5
Duzib160G0440 Durio zibethinus HOM05D006009 ORTHO05D007389 6.3e-257 891.0 725 66.3
Thecc.06G017900 Theobroma cacao HOM05D006009 ORTHO05D007389 2.0e-255 885.9 725 65.8
Cfa004445 Carpinus fangiana HOM05D006009 ORTHO05D007389 2.6e-255 885.6 725 66.9
Dinv29632 Davidia involucrata HOM05D006009 ORTHO05D007389 9.4e-253 877.1 725 65.9
RcHm_v2.0_Chr7g0219751 Rosa chinensis HOM05D006009 ORTHO05D007389 9.7e-250 867.1 725 65.2
COL.COLO4_31132 Corchorus olitorius HOM05D006009 ORTHO05D007389 5.3e-248 861.3 697 67.1
CiPaw.05G001600 Carya illinoinensis HOM05D006009 ORTHO05D007389 6.5e-246 854.4 725 65.1
Manes.10G106700 Manihot esculenta HOM05D006009 ORTHO05D007389 6.5e-246 854.4 726 64.6
FvH4_5g27851 Fragaria vesca HOM05D006009 ORTHO05D007389 1.1e-245 853.6 725 64.7
Haze_09985 Corylus avellana HOM05D006009 ORTHO05D007389 2.0e-242 842.8 812 59.4
Ciclev10000419m.g Citrus clementina HOM05D006009 ORTHO05D007389 2.6e-242 842.4 727 63.3
CSS0016468 Camellia sinensis var. sinensis HOM05D006009 ORTHO05D007389 1.7e-241 839.7 725 62.9
Gohir.D06G150100 Gossypium hirsutum HOM05D006009 ORTHO05D007389 3.8e-238 828.6 725 62.3
CsaV3_5G037180 Cucumis sativus L. HOM05D006009 ORTHO05D007389 5.0e-238 828.2 727 63.0
MD08G1248100 Malus domestica HOM05D006009 ORTHO05D007389 5.0e-238 828.2 725 63.9
TWI59G1011 Tripterygium wilfordii HOM05D006009 ORTHO05D007389 8.6e-238 827.4 725 63.0
Rhsim11G0117900 Rhododendron simsii HOM05D006009 ORTHO05D007389 2.5e-237 825.9 754 61.0
Actinidia00150 Actinidia chinensis HOM05D006009 ORTHO05D007389 4.2e-237 825.1 725 62.6
Gorai.010G175200 Gossypium raimondii HOM05D006009 ORTHO05D007389 1.6e-236 823.2 726 62.3
Nitab4.5_0002261g0040 Nicotiana tabacum HOM05D006009 ORTHO05D007389 1.6e-236 823.2 731 63.6
Sabra03G0000300 Salix brachista HOM05D006009 ORTHO05D007389 1.6e-236 823.2 731 63.2
MD15G1442900 Malus domestica HOM05D006009 ORTHO05D007389 4.7e-236 821.6 726 62.5
Potri.003G000900 Populus trichocarpa HOM05D006009 ORTHO05D007389 4.7e-236 821.6 731 63.5
ClCG11G000290 Citrullus lanatus HOM05D006009 ORTHO05D007389 8.0e-236 820.8 727 63.1
Ca_13530_v3 Cicer arietinum L. HOM05D006009 ORTHO05D007389 1.8e-235 819.7 727 63.3
Solyc01g103040.4 Solanum lycopersicum HOM05D006009 ORTHO05D007389 2.3e-235 819.3 725 62.8
MELO3C022930.2 Cucumis melo HOM05D006009 ORTHO05D007389 4.0e-235 818.5 727 62.3
arahy.Tifrunner.gnm1.ann1.WHZ4K1 Arachis hypogaea HOM05D006009 ORTHO05D007389 5.7e-234 814.7 725 62.3
TPR.G5949 Trifolium pratense HOM05D006009 ORTHO05D007389 2.4e-232 809.3 727 63.1
arahy.Tifrunner.gnm1.ann1.AUD1A6 Arachis hypogaea HOM05D006009 ORTHO05D007389 3.1e-232 808.9 725 61.9
Nitab4.5_0005110g0010 Nicotiana tabacum HOM05D006009 ORTHO05D007389 4.1e-232 808.5 749 61.5
PGR142G3497 Punica granatum HOM05D006009 ORTHO05D007389 3.5e-231 805.4 731 61.4
Psat4g001000 Pisum sativum HOM05D006009 ORTHO05D007389 4.5e-231 805.1 727 61.8
Lsat_1_v5_gn_5_104280 Lactuca sativa HOM05D006009 ORTHO05D007389 1.9e-229 799.7 729 61.7
Cc02_g23590 Coffea canephora HOM05D006009 ORTHO05D007389 2.5e-229 799.3 730 60.4
Prupe.1G585300 Prunus persica HOM05D006009 ORTHO05D007389 3.3e-229 798.9 669 66.5
Sopen01g045450 Solanum pennellii HOM05D006009 ORTHO05D007389 2.8e-228 795.8 725 61.8
Eucgr.I02796 Eucalyptus grandis HOM05D006009 ORTHO05D007389 4.0e-227 792.0 728 60.6
SGA_v2.0_scaffold131G34411 Striga asiatica HOM05D006009 ORTHO05D007389 1.2e-226 790.4 735 61.1
TAR628G0644 Trochodendron aralioides HOM05D006009 ORTHO05D007389 3.4e-226 788.9 727 62.3
Medtr4g134640 Medicago truncatula HOM05D006009 ORTHO05D007389 5.8e-226 788.1 726 61.2
Hma1.2p1_0052F.1_g030000 Hydrangea macrophylla HOM05D006009 ORTHO05D007389 1.1e-224 783.9 708 61.7
Lj4g0014586 Lotus japonicus HOM05D006009 ORTHO05D007389 1.1e-224 783.9 726 60.7
Peaxi162Scf00011g01924 Petunia axillaris HOM05D006009 ORTHO05D007389 1.2e-223 780.4 726 60.9
Glyma.17G001700 Glycine max HOM05D006009 ORTHO05D007389 3.5e-223 778.9 726 59.9
Sc03g0005770 Simmondsia chinensis HOM05D006009 ORTHO05D007389 1.0e-222 777.3 727 60.0
ECA234G2369 Erigeron canadensis HOM05D006009 ORTHO05D007389 2.3e-222 776.2 716 60.6
Lalb_Chr12g0195841 Lupinus albus HOM05D006009 ORTHO05D007389 3.9e-222 775.4 726 60.2
Aqoxy6G00035 Aquilegia oxysepala HOM05D006009 ORTHO05D007389 1.2e-220 770.4 736 58.3
HanXRQChr10g0301411 Helianthus annuus HOM05D006009 ORTHO05D007389 4.4e-218 761.9 726 58.5
Migut.B00722 Erythranthe guttata HOM05D006009 ORTHO05D007389 3.7e-217 758.8 737 59.0
FAN08G0569 Fragaria x ananassa HOM05D006009 ORTHO05D007389 8.3e-217 757.7 796 56.5
PSO017G1873 Papaver somniferum HOM05D006009 ORTHO05D007389 2.1e-215 753.1 728 57.4
MSTRG.16468 Avicennia marina HOM05D006009 ORTHO05D007389 4.6e-215 751.9 704 60.4
MBI03_g05191_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D007389 6.0e-215 751.5 727 58.5
Phvul.003G076200 Phaseolus vulgaris HOM05D006009 ORTHO05D007389 1.7e-214 750.0 702 60.3
vmacro01680 Vaccinium macrocarpon HOM05D006009 ORTHO05D007389 1.9e-213 746.5 814 54.4
Glyma.07G272700 Glycine max HOM05D006009 ORTHO05D007389 3.4e-210 735.7 699 59.9
Potri.004G228900 Populus trichocarpa HOM05D006009 ORTHO05D007389 8.1e-204 714.5 730 57.9
AUR62042641 Chenopodium quinoa HOM05D006009 ORTHO05D007389 1.1e-203 714.1 749 55.7
Nn5g27199 Nelumbo nucifera HOM05D006009 ORTHO05D007389 1.3e-201 707.2 727 57.6
FAN04G2183 Fragaria x ananassa HOM05D006009 ORTHO05D007389 1.9e-200 703.4 671 60.4
Gohir.A06G144400 Gossypium hirsutum HOM05D006009 ORTHO05D007389 1.9e-200 703.4 725 55.9
Ah.03g136790 Amaranthus hybridus HOM05D006009 ORTHO05D007389 3.0e-198 696.0 727 55.7
DCAR_001725 Daucus carota HOM05D006009 ORTHO05D007389 3.6e-196 689.1 701 55.9
Lj5C283T7 Lonicera japonica HOM05D006009 ORTHO05D007389 8.1e-196 688.0 728 55.4
AUR62032470 Chenopodium quinoa HOM05D006009 ORTHO05D007389 2.6e-194 682.9 729 54.5
unitig_8.g4550 Utricularia gibba HOM05D006009 ORTHO05D007389 3.2e-192 676.0 670 56.6
PSO170G2218 Papaver somniferum HOM05D006009 ORTHO05D007389 3.9e-190 669.1 701 54.5
EL10Ac6g13997 Beta vulgaris HOM05D006009 ORTHO05D007389 2.5e-189 666.4 777 51.9
ATR1089G153 Amborella trichopoda HOM05D006009 ORTHO05D007389 3.0e-182 642.9 736 51.9
Os01g0877300 Oryza sativa ssp. japonica HOM05D006009 ORTHO05D007389 2.6e-170 603.2 733 49.4
Oeu043610.2 Olea europaea HOM05D006009 ORTHO05D007389 6.5e-169 598.6 672 53.0
HPP92_003614 Vanilla planifolia HOM05D006009 ORTHO05D007389 4.8e-164 582.4 730 49.2
CANSAT01G0444 Cannabis sativa HOM05D006009 ORTHO05D007389 4.1e-163 579.3 594 56.9
CDE05G2940 Ceratophyllum demersum HOM05D006009 ORTHO05D007389 4.7e-143 512.7 575 52.3
Cpa.g.sc173.18 Carica papaya HOM05D006009 ORTHO05D007389 1.5e-136 491.1 357 73.1
FAN18G4220 Fragaria x ananassa HOM05D006009 ORTHO05D007389 1.4e-131 474.6 556 51.3
Sed0013076 Sechium edule HOM05D006009 ORTHO05D007389 1.9e-128 464.2 588 50.5
Manes.10G107000 Manihot esculenta HOM05D006009 ORTHO05D007389 1.6e-127 461.1 429 60.4
CAN.G855.52 Capsicum annuum HOM05D006009 ORTHO05D007389 1.5e-120 438.0 361 65.7
GSVIVG01023148001 Vitis vinifera HOM05D006009 ORTHO05D007389 1.2e-117 428.3 431 58.2
GSVIVG01023147001 Vitis vinifera HOM05D006009 ORTHO05D007389 2.0e-117 427.6 299 74.9
Oeu028479.1 Olea europaea HOM05D006009 ORTHO05D007389 3.9e-105 386.7 265 76.2
CAN.G855.51 Capsicum annuum HOM05D006009 ORTHO05D007389 6.4e-100 369.4 376 56.4
Pp3c17_20400 Physcomitrium patens HOM05D006009 ORTHO05D007389 6.2e-87 326.2 696 33.8
AagrBONN_evm.TU.Sc2ySwM_228.1218 Anthoceros agrestis HOM05D006009 ORTHO05D007389 2.9e-84 317.4 730 33.6
ECA234G2367 Erigeron canadensis HOM05D000005 ORTHO05D000012 5.1e-81 306.6 343 55.1
Cpa.g.sc173.20 Carica papaya HOM05D006009 ORTHO05D007389 3.3e-80 303.9 372 51.6
Mapoly0034s0031 Marchantia polymorpha HOM05D006009 ORTHO05D007389 8.1e-79 299.3 662 30.8
Zm00001eb145920 Zea mays HOM05D006009 ORTHO05D007389 3.1e-78 297.4 446 45.1
Sabra01G0173900 Salix brachista HOM05D006009 ORTHO05D007389 8.4e-76 289.3 505 40.4
CBR_g38734 Chara braunii HOM05D006009 ORTHO05D007389 7.6e-69 266.2 720 30.1
Oeu028480.1 Olea europaea HOM05D006009 ORTHO05D007389 2.2e-68 264.6 272 54.8
SMO343G0014 Selaginella moellendorffii HOM05D006009 ORTHO05D007389 6.0e-66 256.5 702 29.5
SHI05061 Sapria himalayana HOM05D000030 ORTHO05D000009 8.1e-63 246.1 441 42.0
Eucgr.D02407 Eucalyptus grandis HOM05D006009 ORTHO05D007389 1.6e-29 135.6 136 57.4
SEGI_34522 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 1.0e-25 122.9 82 68.3
Hund15371 Selenicereus undatus HOM05D006009 ORTHO05D007389 3.3e-24 117.9 226 39.4
PRCOL_00003389 Prasinoderma coloniale HOM05D006009 ORTHO05D007389 9.7e-24 116.3 504 23.8
SEGI_26370 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 1.3e-23 115.9 125 49.6
SEGI_19376 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 2.8e-23 114.8 144 47.9
Oeu028483.1 Olea europaea HOM05D006009 ORTHO05D007389 6.8e-17 93.6 107 49.5
Psat6g226760 Pisum sativum HOM05D003335 ORTHO05D003853 1.5e-16 92.4 181 35.4
SEGI_01187 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 1.5e-16 92.4 152 38.8
QL08p014094 Quercus lobata HOM05D006009 ORTHO05D007389 2.6e-16 91.7 99 54.5
MBI18_g16980_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 4.1e-14 84.3 55 78.2
SMO343G0089 Selaginella moellendorffii HOM05D006009 ORTHO05D007389 5.4e-14 84.0 221 31.2
MCO13G251 Micromonas commoda HOM05D006009 ORTHO05D007389 2.7e-13 81.6 115 39.1
Glyma.14G105500 Glycine max HOM05D006009 ORTHO05D007389 5.0e-12 77.4 70 52.9
Zm00001eb351220 Zea mays HOM05D006009 ORTHO05D007389 6.5e-12 77.0 55 70.9
MBI18_g20174_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D007389 3.2e-11 74.7 68 54.4
MBI06_g11892_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D004199 6.1e-10 70.5 105 46.7
GSVIVG01023072001 Vitis vinifera HOM05D001300 ORTHO05D014438 1.4e-09 69.3 93 40.9


User provided reference genes

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