Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G23340 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 2.7e-46 188.7 128 100.0
AT5G49550 Arabidopsis thaliana HOM05D006288 ORTHO05D007416 3.1e-42 175.3 128 96.1
AL954U10010 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 1.1e-39 166.8 128 93.0
Sp2g19860 Schrenkiella parvula HOM05D006288 ORTHO05D007416 6.7e-37 157.5 125 91.2
CARHR287980 Cardamine hirsuta HOM05D006288 ORTHO05D007416 1.3e-35 153.3 128 84.4
Thhalv10005135m.g Eutrema salsugineum HOM05D006288 ORTHO05D007416 2.8e-35 152.1 124 89.5
Carub.0008s0943 Capsella rubella HOM05D006288 ORTHO05D007416 3.7e-35 151.8 124 77.4
A09p04890 Brassica napus HOM05D006288 ORTHO05D007416 5.3e-34 147.9 125 85.6
BcaB04g19620 Brassica carinata HOM05D006288 ORTHO05D007416 9.1e-34 147.1 125 84.8
BraA09t36127Z Brassica rapa HOM05D006288 ORTHO05D007416 9.1e-34 147.1 125 85.6
BcaC04g23731 Brassica carinata HOM05D006288 ORTHO05D007416 2.0e-33 146.0 125 88.0
C09p05280 Brassica napus HOM05D006288 ORTHO05D007416 2.0e-33 146.0 125 88.0
Aa31LG7G12050 Aethionema arabicum HOM05D006288 ORTHO05D007416 1.1e-28 130.2 127 67.7
THA.LOC104805112 Tarenaya hassleriana HOM05D006288 ORTHO05D007416 1.7e-27 126.3 117 59.0
C07p39960 Brassica napus HOM05D006288 ORTHO05D007416 1.8e-26 122.9 71 87.3
BraA06t26742Z Brassica rapa HOM05D006288 ORTHO05D007416 1.8e-26 122.9 77 83.1
BolC7t44529H Brassica oleracea HOM05D006288 ORTHO05D007416 3.1e-26 122.1 71 85.9
Cpa.g.sc14.255 Carica papaya HOM05D006288 ORTHO05D007416 1.5e-23 113.2 118 53.4
Cfa007713 Carpinus fangiana HOM05D006288 ORTHO05D007416 1.6e-22 109.8 110 52.7
Gohir.D12G056100 Gossypium hirsutum HOM05D006288 ORTHO05D007416 2.7e-22 109.0 112 53.6
Gorai.008G059200 Gossypium raimondii HOM05D006288 ORTHO05D007416 2.7e-22 109.0 112 53.6
CiPaw.03G081300 Carya illinoinensis HOM05D006288 ORTHO05D007416 6.1e-22 107.8 110 50.0
Gohir.A12G056700 Gossypium hirsutum HOM05D006288 ORTHO05D007416 1.4e-21 106.7 112 52.7
Duzib133G0644 Durio zibethinus HOM05D006288 ORTHO05D007416 2.3e-21 105.9 74 73.0
Duzib133G1254 Durio zibethinus HOM05D006288 ORTHO05D007416 2.3e-21 105.9 74 73.0
GSVIVG01036516001 Vitis vinifera HOM05D006288 ORTHO05D007416 2.3e-21 105.9 113 51.3
Dinv34894 Davidia involucrata HOM05D006288 ORTHO05D007416 4.0e-21 105.1 112 49.1
FAN14G1171 Fragaria x ananassa HOM05D006288 ORTHO05D007416 4.0e-21 105.1 112 63.4
Medtr3g034300 Medicago truncatula HOM05D006288 ORTHO05D007416 4.0e-21 105.1 74 67.6
vmacro18118 Vaccinium macrocarpon HOM05D006288 ORTHO05D007416 4.0e-21 105.1 112 49.1
Lj3g0015520 Lotus japonicus HOM05D006288 ORTHO05D007416 5.2e-21 104.8 74 67.6
Oeu007090.1 Olea europaea HOM05D006288 ORTHO05D007416 5.2e-21 104.8 112 50.0
Prupe.3G247000 Prunus persica HOM05D006288 ORTHO05D007416 5.2e-21 104.8 112 50.9
RcHm_v2.0_Chr2g0164421 Rosa chinensis HOM05D006288 ORTHO05D007416 5.2e-21 104.8 111 49.5
Actinidia26277 Actinidia chinensis HOM05D006288 ORTHO05D007416 8.8e-21 104.0 110 67.3
PGR004G0851 Punica granatum HOM05D006288 ORTHO05D007416 8.8e-21 104.0 110 50.0
Glyma.13G051400 Glycine max HOM05D006288 ORTHO05D007416 1.5e-20 103.2 72 69.4
Glyma.19G037000 Glycine max HOM05D006288 ORTHO05D007416 1.5e-20 103.2 72 69.4
MD17G1067500 Malus domestica HOM05D006288 ORTHO05D007416 1.5e-20 103.2 112 49.1
Lalb_Chr21g0318141 Lupinus albus HOM05D006288 ORTHO05D007416 2.0e-20 102.8 74 67.6
Rhsim10G0068900 Rhododendron simsii HOM05D006288 ORTHO05D007416 2.0e-20 102.8 112 47.3
Sc11g0008960 Simmondsia chinensis HOM05D006288 ORTHO05D007416 2.0e-20 102.8 110 47.3
Hma1.2p1_0304F.1_g119265 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 2.6e-20 102.4 110 50.9
Hma1.2p1_0304F.1_g119270 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 2.6e-20 102.4 110 50.9
CANSAT64G2264 Cannabis sativa HOM05D005170 ORTHO05D007416 3.3e-20 102.1 72 69.4
Ca_13697_v3 Cicer arietinum L. HOM05D006288 ORTHO05D007416 3.3e-20 102.1 74 67.6
Rhsim08G0078400 Rhododendron simsii HOM05D006288 ORTHO05D007416 3.3e-20 102.1 112 46.4
Thecc.10G108100 Theobroma cacao HOM05D005170 ORTHO05D007416 3.3e-20 102.1 112 50.9
Psat5g210920 Pisum sativum HOM05D006288 ORTHO05D007416 4.4e-20 101.7 110 46.4
Migut.K00879 Erythranthe guttata HOM05D006288 ORTHO05D007416 5.7e-20 101.3 110 49.1
CsaV3_4G009920 Cucumis sativus L. HOM05D006288 ORTHO05D007416 7.4e-20 100.9 73 65.8
Hund16253 Selenicereus undatus HOM05D006288 ORTHO05D007416 7.4e-20 100.9 109 47.7
CAN.G93.47 Capsicum annuum HOM05D006288 ORTHO05D007416 9.7e-20 100.5 112 62.5
Cc07_g04640 Coffea canephora HOM05D006288 ORTHO05D007416 9.7e-20 100.5 109 50.5
Eucgr.F02878 Eucalyptus grandis HOM05D006288 ORTHO05D007416 9.7e-20 100.5 71 70.4
Nn4g23570 Nelumbo nucifera HOM05D006288 ORTHO05D007416 9.7e-20 100.5 109 67.0
Psat5g210840 Pisum sativum HOM05D006288 ORTHO05D007416 9.7e-20 100.5 74 63.5
Atru.chr8.595 Acer truncatum HOM05D006288 ORTHO05D007416 1.3e-19 100.1 74 66.2
CSS0015874 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 1.3e-19 100.1 112 47.3
CSS0028097 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 1.3e-19 100.1 112 47.3
FAN02G0987 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.3e-19 100.1 72 68.1
FAN05G5526 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.3e-19 100.1 73 67.1
FAN09G1057 Fragaria x ananassa HOM05D010582 ORTHO05D007416 1.3e-19 100.1 72 68.1
MD09G1077100 Malus domestica HOM05D006288 ORTHO05D007416 1.3e-19 100.1 74 67.6
Manes.01G106000 Manihot esculenta HOM05D006288 ORTHO05D007416 1.3e-19 100.1 112 47.3
Manes.02G062500 Manihot esculenta HOM05D006288 ORTHO05D007416 1.3e-19 100.1 72 65.3
Phvul.004G044700 Phaseolus vulgaris HOM05D006288 ORTHO05D007416 1.3e-19 100.1 72 66.7
MELO3C018910.2 Cucumis melo HOM05D006288 ORTHO05D007416 1.7e-19 99.8 73 64.4
FAN10G3625 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.7e-19 99.8 74 64.9
Potri.017G106200 Populus trichocarpa HOM05D006288 ORTHO05D007416 1.7e-19 99.8 114 64.0
TWI60G1717 Tripterygium wilfordii HOM05D006288 ORTHO05D007416 1.7e-19 99.8 73 67.1
Actinidia17612 Actinidia chinensis HOM05D006288 ORTHO05D007416 2.2e-19 99.4 70 68.6
Sabra17G0089200 Salix brachista HOM05D006288 ORTHO05D007416 2.2e-19 99.4 74 66.2
TPR.G14566 Trifolium pratense HOM05D006288 ORTHO05D007416 2.2e-19 99.4 74 64.9
PSO210G6985 Papaver somniferum HOM05D006288 ORTHO05D007416 2.8e-19 99.0 74 64.9
PSO832G2920 Papaver somniferum HOM05D006288 ORTHO05D007416 2.8e-19 99.0 71 67.6
Psat5g212400 Pisum sativum HOM05D006288 ORTHO05D007416 2.8e-19 99.0 74 62.2
VMungo0464G1523 Vigna mungo HOM05D006288 ORTHO05D007416 2.8e-19 99.0 71 67.6
PSO675G0562 Papaver somniferum HOM05D006288 ORTHO05D007416 3.7e-19 98.6 74 64.9
PSO541G1058 Papaver somniferum HOM05D006288 ORTHO05D007416 4.8e-19 98.2 74 66.2
Peaxi162Scf00019g00316 Petunia axillaris HOM05D006288 ORTHO05D007416 4.8e-19 98.2 110 47.3
QL09p029462 Quercus lobata HOM05D006288 ORTHO05D007416 6.3e-19 97.8 111 46.8
Ah.16g100880 Amaranthus hybridus HOM05D006288 ORTHO05D007416 8.2e-19 97.4 109 45.9
arahy.Tifrunner.gnm1.ann1.J0I6JM Arachis hypogaea HOM05D006288 ORTHO05D007416 8.2e-19 97.4 74 63.5
ATR0691G027 Amborella trichopoda HOM05D006288 ORTHO05D007416 1.1e-18 97.1 109 45.9
ClCG07G016140 Citrullus lanatus HOM05D006288 ORTHO05D007416 1.1e-18 97.1 73 63.0
TAR629G2245 Trochodendron aralioides HOM05D006288 ORTHO05D007416 1.4e-18 96.7 71 66.2
CSS0016762 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 1.8e-18 96.3 112 45.5
CSS0047986 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 1.8e-18 96.3 112 45.5
Sed0021882 Sechium edule HOM05D006288 ORTHO05D007416 1.8e-18 96.3 72 65.3
CSS0029131 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 2.4e-18 95.9 112 47.3
Solyc02g065690.3 Solanum lycopersicum HOM05D006288 ORTHO05D007416 4.1e-18 95.1 110 45.5
Sopen02g015910 Solanum pennellii HOM05D006288 ORTHO05D007416 4.1e-18 95.1 110 45.5
SGA_v2.0_scaffold30G12393 Striga asiatica HOM05D006288 ORTHO05D007416 7.0e-18 94.4 112 44.6
FAN10G2886 Fragaria x ananassa HOM05D006288 ORTHO05D007416 9.1e-18 94.0 76 61.8
Nitab4.5_0003203g0060 Nicotiana tabacum HOM05D006288 ORTHO05D007416 9.1e-18 94.0 72 63.9
PGSC0003DMG400026550 Solanum tuberosum HOM05D006288 ORTHO05D007416 9.1e-18 94.0 110 44.5
Zm00001eb234970 Zea mays HOM05D006288 ORTHO05D007416 1.2e-17 93.6 72 62.5
Lsat_1_v5_gn_4_173980 Lactuca sativa HOM05D006288 ORTHO05D007416 1.6e-17 93.2 114 59.6
FvH4_6g46100 Fragaria vesca HOM05D006288 ORTHO05D007416 2.0e-17 92.8 67 67.2
ECA232G4388 Erigeron canadensis HOM05D006288 ORTHO05D007416 2.6e-17 92.4 109 65.1
Os02g0190900 Oryza sativa ssp. japonica HOM05D006288 ORTHO05D007416 5.9e-17 91.3 72 62.5
SalBow7G0779 Salvia bowleyana HOM05D006288 ORTHO05D007416 5.9e-17 91.3 110 47.3
EL10Ac2g04409 Beta vulgaris HOM05D006288 ORTHO05D007416 7.7e-17 90.9 71 62.0
CDE10G0042 Ceratophyllum demersum HOM05D006288 ORTHO05D007416 7.7e-17 90.9 72 59.7
AUR62023135 Chenopodium quinoa HOM05D006288 ORTHO05D007416 2.9e-16 89.0 71 57.7
Lsat_1_v5_gn_4_174040 Lactuca sativa HOM05D006288 ORTHO05D007416 2.9e-16 89.0 114 40.4
SEGI_23755 Sequoiadendron giganteum HOM05D006288 ORTHO05D007416 6.5e-16 87.8 109 43.1
FvH4_6g24710 Fragaria vesca HOM05D006288 ORTHO05D007416 3.2e-15 85.5 55 72.7
FAN14G4004 Fragaria x ananassa HOM05D006288 ORTHO05D007416 3.2e-15 85.5 55 72.7
unitig_32.g10759 Utricularia gibba HOM05D006288 ORTHO05D007416 4.2e-15 85.1 64 64.1
TAR371G0310 Trochodendron aralioides HOM05D006288 ORTHO05D007416 2.1e-14 82.8 74 54.1
HPP92_018391 Vanilla planifolia HOM05D006288 ORTHO05D007416 6.1e-14 81.3 116 43.1
Atru.BG.156.p Acer truncatum HOM05D006288 ORTHO05D007416 4.0e-13 78.6 59 62.7
SHI46878 Sapria himalayana HOM05D006288 ORTHO05D007416 5.2e-13 78.2 74 48.6
Pp3c21_3840 Physcomitrium patens HOM05D006288 ORTHO05D007416 2.6e-12 75.9 71 50.7
HanXRQChr15g0464891 Helianthus annuus HOM05D006288 ORTHO05D007416 5.7e-12 74.7 93 62.4
Eucgr.K01979 Eucalyptus grandis HOM05D006288 ORTHO05D007416 1.3e-11 73.6 73 60.3
Mapoly0015s0174 Marchantia polymorpha HOM05D006288 ORTHO05D007416 6.3e-11 71.2 71 47.9
AagrBONN_evm.TU.Sc2ySwM_344.2644 Anthoceros agrestis HOM05D006288 ORTHO05D007416 5.0e-08 61.6 63 49.2
DCAR_011002 Daucus carota HOM05D006288 ORTHO05D007416 8.5e-08 60.8 75 41.3
Haze_03283 Corylus avellana HOM05D002280 ORTHO05D002322 1.9e-07 59.7 41 70.7
CARHR263050 Cardamine hirsuta HOM05D006288 ORTHO05D007416 2.5e-07 59.3 43 69.8
Nitab4.5_0002249g0090 Nicotiana tabacum HOM05D006288 ORTHO05D007416 2.5e-07 59.3 75 40.0
SMO358G0122 Selaginella moellendorffii HOM05D006288 ORTHO05D007416 1.2e-06 57.0 58 43.1
Hma1.2p1_2186F.1_g316383 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 3.6e-06 55.5 75 38.7
Hma1.2p1_3488F.1_g336360 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 3.6e-06 55.5 75 38.7


User provided reference genes

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