Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G21080 Arabidopsis lyrata HOM05D004218 ORTHO05D004938 1.1e-140 503.4 274 100.0
AL1G38480 Arabidopsis lyrata HOM05D004218 ORTHO05D004938 2.6e-115 419.1 225 94.2
AL1G38490 Arabidopsis lyrata HOM05D004218 ORTHO05D004938 4.0e-111 405.2 225 89.8
AT1G27030 Arabidopsis thaliana HOM05D004218 ORTHO05D004938 1.7e-109 399.8 225 89.8
Thhalv10008275m.g Eutrema salsugineum HOM05D004218 ORTHO05D004938 1.5e-97 360.1 222 80.6
A07p13210 Brassica napus HOM05D004218 ORTHO05D004938 7.2e-97 357.8 225 79.6
BcaC06g35101 Brassica carinata HOM05D004218 ORTHO05D004938 4.7e-96 355.1 224 79.5
BraA07t29093Z Brassica rapa HOM05D004218 ORTHO05D004938 1.0e-95 354.0 225 78.7
BcaB06g28798 Brassica carinata HOM05D004218 ORTHO05D004938 5.2e-95 351.7 220 80.0
BcaB03g11982 Brassica carinata HOM05D004218 ORTHO05D004938 8.8e-95 350.9 222 78.4
BolC4t27868H Brassica oleracea HOM05D004218 ORTHO05D004938 8.8e-95 350.9 222 78.8
Thhalv10007811m.g Eutrema salsugineum HOM05D004218 ORTHO05D004938 2.8e-93 345.9 222 76.6
Sp1g21770 Schrenkiella parvula HOM05D004218 ORTHO05D004938 1.6e-91 340.1 222 75.2
BcaB03g14100 Brassica carinata HOM05D004218 ORTHO05D004938 1.0e-90 337.4 222 75.7
Carub.0001s2395 Capsella rubella HOM05D004218 ORTHO05D004938 1.3e-90 337.0 223 73.5
Thhalv10023603m.g Eutrema salsugineum HOM05D004218 ORTHO05D004938 1.3e-90 337.0 222 76.6
BraA07t29096Z Brassica rapa HOM05D004218 ORTHO05D004938 3.8e-90 335.5 222 74.8
A07p13260 Brassica napus HOM05D004218 ORTHO05D004938 1.2e-88 330.5 222 73.9
THA.LOC104822097 Tarenaya hassleriana HOM05D004218 ORTHO05D004938 5.2e-87 325.1 221 74.2
AL1G38500 Arabidopsis lyrata HOM05D004218 ORTHO05D004938 7.5e-86 321.2 220 72.3
Aa31LG7G8130 Aethionema arabicum HOM05D004218 ORTHO05D004938 1.7e-85 320.1 217 71.9
Sp1g21780 Schrenkiella parvula HOM05D004218 ORTHO05D004938 2.2e-85 319.7 222 68.5
AT1G27020 Arabidopsis thaliana HOM05D004218 ORTHO05D004938 3.7e-85 318.9 220 72.3
BcaC06g35098 Brassica carinata HOM05D004218 ORTHO05D004938 8.3e-85 317.8 222 72.5
Thhalv10000255m.g Eutrema salsugineum HOM05D004218 ORTHO05D004938 4.1e-84 315.5 222 72.1
Sp1g21785 Schrenkiella parvula HOM05D004218 ORTHO05D004938 5.4e-84 315.1 223 72.6
BraA09t39542Z Brassica rapa HOM05D004218 ORTHO05D004938 7.0e-84 314.7 223 72.6
A09p40450 Brassica napus HOM05D004218 ORTHO05D004938 9.2e-84 314.3 223 72.6
Thhalv10008276m.g Eutrema salsugineum HOM05D004218 ORTHO05D004938 9.2e-84 314.3 221 71.0
CARHR024900 Cardamine hirsuta HOM05D004218 ORTHO05D004938 1.2e-83 313.9 220 71.4
Carub.0001s2394 Capsella rubella HOM05D004218 ORTHO05D004938 5.9e-83 311.6 225 68.0
CARHR024890 Cardamine hirsuta HOM05D004218 ORTHO05D004938 7.8e-83 311.2 220 68.2
C07p19810 Brassica napus HOM05D004218 ORTHO05D004938 1.7e-82 310.1 220 66.8
BolC7t42494H Brassica oleracea HOM05D004218 ORTHO05D004938 1.7e-82 310.1 220 66.8
BcaB03g14099 Brassica carinata HOM05D004218 ORTHO05D004938 2.3e-82 309.7 218 67.4
A07p13220 Brassica napus HOM05D004218 ORTHO05D004938 3.9e-82 308.9 220 66.4
BcaC05g26350 Brassica carinata HOM05D004218 ORTHO05D004938 4.7e-80 302.0 223 71.7
BraA07t29094Z Brassica rapa HOM05D004218 ORTHO05D004938 1.2e-78 297.4 220 65.0
BraA08t34706Z Brassica rapa HOM05D004218 ORTHO05D004938 1.7e-77 293.5 218 68.8
AL1G38470 Arabidopsis lyrata HOM05D004218 ORTHO05D004938 2.9e-77 292.7 198 72.2
BolC5t31091H Brassica oleracea HOM05D004218 ORTHO05D004938 8.3e-77 291.2 204 74.0
A08p27710 Brassica napus HOM05D004218 ORTHO05D004938 5.4e-76 288.5 218 67.9
BcaC07g39255 Brassica carinata HOM05D004218 ORTHO05D004938 1.2e-75 287.3 217 67.3
C08p22580 Brassica napus HOM05D004218 ORTHO05D004938 1.2e-75 287.3 217 67.3
BcaC06g35100 Brassica carinata HOM05D004218 ORTHO05D004938 1.2e-70 270.8 220 61.4
C05p23720 Brassica napus HOM05D004218 ORTHO05D004938 2.6e-70 269.6 197 71.6
Cpa.g.sc5.274 Carica papaya HOM05D004218 ORTHO05D004938 5.4e-60 235.3 219 53.0
MD16G1078500 Malus domestica HOM05D004218 ORTHO05D004938 8.6e-58 228.0 219 52.5
vmacro01228 Vaccinium macrocarpon HOM05D004218 ORTHO05D004938 1.1e-57 227.6 219 51.6
AL1G17150 Arabidopsis lyrata HOM05D004218 ORTHO05D004938 2.5e-57 226.5 219 53.0
Ciclev10031724m.g Citrus clementina HOM05D004218 ORTHO05D004938 4.3e-57 225.7 219 50.2
THA.LOC104822930 Tarenaya hassleriana HOM05D004218 ORTHO05D004938 4.3e-57 225.7 219 51.6
CSS0011407 Camellia sinensis var. sinensis HOM05D004218 ORTHO05D004938 5.6e-57 225.3 219 50.7
TAR374G0431 Trochodendron aralioides HOM05D004218 ORTHO05D004938 9.6e-57 224.6 219 50.2
CARHR006730 Cardamine hirsuta HOM05D004218 ORTHO05D004938 1.2e-56 224.2 219 52.5
SGA_v2.0_scaffold302G47864 Striga asiatica HOM05D004218 ORTHO05D004938 1.2e-56 224.2 219 51.1
Carub.0001s0633 Capsella rubella HOM05D004218 ORTHO05D004938 2.1e-56 223.4 219 52.5
PSO478G0406 Papaver somniferum HOM05D004218 ORTHO05D004938 2.1e-56 223.4 222 52.3
Dinv34202 Davidia involucrata HOM05D004218 ORTHO05D004938 2.8e-56 223.0 219 49.8
PSO017G6443 Papaver somniferum HOM05D004218 ORTHO05D004938 2.8e-56 223.0 222 51.4
Thecc.02G354900 Theobroma cacao HOM05D004218 ORTHO05D004938 4.7e-56 222.2 219 50.7
Ca_04743_v3 Cicer arietinum L. HOM05D004218 ORTHO05D004938 6.2e-56 221.9 220 51.4
TPR.G13761 Trifolium pratense HOM05D004218 ORTHO05D004938 8.1e-56 221.5 220 51.4
Lj6A794T99 Lonicera japonica HOM05D004218 ORTHO05D004938 1.1e-55 221.1 219 50.2
Duzib248G0205 Durio zibethinus HOM05D004218 ORTHO05D004938 1.4e-55 220.7 219 50.7
Migut.L01342 Erythranthe guttata HOM05D004218 ORTHO05D004938 1.4e-55 220.7 219 51.6
Thhalv10007958m.g Eutrema salsugineum HOM05D004218 ORTHO05D004938 1.4e-55 220.7 219 52.1
QL03p065637 Quercus lobata HOM05D004218 ORTHO05D004938 1.4e-55 220.7 219 50.2
AT1G07040 Arabidopsis thaliana HOM05D004218 ORTHO05D004938 1.8e-55 220.3 219 51.6
Medtr5g038460 Medicago truncatula HOM05D004218 ORTHO05D004938 1.8e-55 220.3 219 51.1
Prupe.1G268000 Prunus persica HOM05D004218 ORTHO05D004938 1.8e-55 220.3 219 50.2
CiPaw.05G139700 Carya illinoinensis HOM05D004218 ORTHO05D004938 3.1e-55 219.5 219 50.2
Gohir.D13G068200 Gossypium hirsutum HOM05D004218 ORTHO05D004938 3.1e-55 219.5 219 51.1
BolC5t29284H Brassica oleracea HOM05D004218 ORTHO05D004938 4.0e-55 219.2 219 51.1
Lsat_1_v5_gn_8_54121 Lactuca sativa HOM05D004218 ORTHO05D004938 4.0e-55 219.2 219 51.1
Phvul.002G066300 Phaseolus vulgaris HOM05D004218 ORTHO05D004938 4.0e-55 219.2 219 50.2
PGR119G2468 Punica granatum HOM05D004218 ORTHO05D004938 4.0e-55 219.2 219 50.7
Actinidia31179 Actinidia chinensis HOM05D004218 ORTHO05D004938 5.2e-55 218.8 219 49.8
COL.COLO4_07925 Corchorus olitorius HOM05D004218 ORTHO05D004938 5.2e-55 218.8 219 50.2
Glyma.02G021600 Glycine max HOM05D004218 ORTHO05D004938 5.2e-55 218.8 219 49.3
Sp1g05760 Schrenkiella parvula HOM05D004218 ORTHO05D004938 6.9e-55 218.4 219 51.6
Hund25269 Selenicereus undatus HOM05D004218 ORTHO05D004938 6.9e-55 218.4 219 50.2
VMungo1215G2729 Vigna mungo HOM05D004218 ORTHO05D004938 9.0e-55 218.0 219 49.8
ATR1120G161 Amborella trichopoda HOM05D004218 ORTHO05D004938 1.2e-54 217.6 220 50.9
Nn3g17132 Nelumbo nucifera HOM05D004218 ORTHO05D004938 1.5e-54 217.2 219 49.8
Gorai.013G077700 Gossypium raimondii HOM05D004218 ORTHO05D004938 2.0e-54 216.9 219 50.7
Rhsim12G0057400 Rhododendron simsii HOM05D004218 ORTHO05D004938 2.0e-54 216.9 233 49.4
FAN17G0090 Fragaria x ananassa HOM05D004218 ORTHO05D004938 3.4e-54 216.1 219 50.7
FAN22G1204 Fragaria x ananassa HOM05D004218 ORTHO05D004938 3.4e-54 216.1 219 50.7
Lj2g0000105 Lotus japonicus HOM05D004218 ORTHO05D004938 3.4e-54 216.1 219 49.3
TWI18G0549 Tripterygium wilfordii HOM05D004218 ORTHO05D004938 3.4e-54 216.1 219 49.3
Cc11_g13440 Coffea canephora HOM05D004218 ORTHO05D004938 4.4e-54 215.7 219 51.1
Lalb_Chr17g0340391 Lupinus albus HOM05D004218 ORTHO05D004938 5.8e-54 215.3 219 50.7
CANSAT64G2557 Cannabis sativa HOM05D004218 ORTHO05D004938 7.6e-54 214.9 219 48.9
DCAR_027386 Daucus carota HOM05D004218 ORTHO05D004938 7.6e-54 214.9 219 48.9
GSVIVG01020072001 Vitis vinifera HOM05D004218 ORTHO05D004938 7.6e-54 214.9 219 49.3
Cfa009032 Carpinus fangiana HOM05D004218 ORTHO05D004938 9.9e-54 214.5 219 48.9
CsaV3_6G036150 Cucumis sativus L. HOM05D004218 ORTHO05D004938 9.9e-54 214.5 220 48.2
C07p19800 Brassica napus HOM05D004218 ORTHO05D004938 1.3e-53 214.2 119 87.4
BolC7t42493H Brassica oleracea HOM05D004218 ORTHO05D004938 1.3e-53 214.2 119 87.4
CAN.G279.12 Capsicum annuum HOM05D004218 ORTHO05D004938 1.3e-53 214.2 219 49.8
A10p05580 Brassica napus HOM05D004218 ORTHO05D004938 1.7e-53 213.8 219 51.1
BraA10t42819Z Brassica rapa HOM05D004218 ORTHO05D004938 1.7e-53 213.8 219 51.1
FAN07G0325 Fragaria x ananassa HOM05D004218 ORTHO05D004938 1.7e-53 213.8 219 50.2
RcHm_v2.0_Chr4g0440591 Rosa chinensis HOM05D004218 ORTHO05D004938 1.7e-53 213.8 219 49.3
Eucgr.G02550 Eucalyptus grandis HOM05D004218 ORTHO05D004938 2.2e-53 213.4 219 48.9
Hma1.2p1_1545F.1_g289920 Hydrangea macrophylla HOM05D004218 ORTHO05D004938 2.2e-53 213.4 219 47.5
Potri.008G194800 Populus trichocarpa HOM05D004218 ORTHO05D004938 2.9e-53 213.0 222 50.0
AUR62026251 Chenopodium quinoa HOM05D004218 ORTHO05D004938 3.8e-53 212.6 219 50.2
MELO3C026498.2 Cucumis melo HOM05D004218 ORTHO05D004938 3.8e-53 212.6 220 48.2
Manes.05G096800 Manihot esculenta HOM05D004218 ORTHO05D004938 6.4e-53 211.8 219 50.2
MSTRG.7824 Avicennia marina HOM05D004218 ORTHO05D004938 8.4e-53 211.5 219 50.7
Sc14g0008380 Simmondsia chinensis HOM05D004218 ORTHO05D004938 1.4e-52 210.7 220 49.5
Psat0s3244g0040 Pisum sativum HOM05D004218 ORTHO05D004938 1.9e-52 210.3 219 47.9
PGSC0003DMG400017643 Solanum tuberosum HOM05D004218 ORTHO05D004938 1.9e-52 210.3 219 49.3
ClCG08G009010 Citrullus lanatus HOM05D004218 ORTHO05D004938 2.4e-52 209.9 220 48.2
HanXRQChr08g0209171 Helianthus annuus HOM05D004218 ORTHO05D004938 2.4e-52 209.9 219 48.4
Os10g0463800 Oryza sativa ssp. japonica HOM05D004218 ORTHO05D004938 2.4e-52 209.9 221 51.6
FAN12G1121 Fragaria x ananassa HOM05D004218 ORTHO05D004938 4.2e-52 209.1 226 49.1
Aqoxy3G03270 Aquilegia oxysepala HOM05D004218 ORTHO05D004938 5.4e-52 208.8 219 48.9
Sed0012992 Sechium edule HOM05D004218 ORTHO05D004938 5.4e-52 208.8 220 48.2
Sabra08G0148000 Salix brachista HOM05D004218 ORTHO05D004938 7.1e-52 208.4 222 48.6
Peaxi162Scf00209g00319 Petunia axillaris HOM05D004218 ORTHO05D004938 1.6e-51 207.2 219 49.3
Sopen05g003030 Solanum pennellii HOM05D004218 ORTHO05D004938 4.6e-51 205.7 219 48.4
Solyc05g007060.4 Solanum lycopersicum HOM05D004218 ORTHO05D004938 1.7e-50 203.8 219 47.9
Dinv24956 Davidia involucrata HOM05D004218 ORTHO05D004938 3.0e-50 203.0 198 49.5
Zm00001eb046510 Zea mays HOM05D004218 ORTHO05D004938 3.9e-50 202.6 221 49.8
Ah.01g005530 Amaranthus hybridus HOM05D004218 ORTHO05D004938 5.1e-50 202.2 219 47.9
CDE06G2220 Ceratophyllum demersum HOM05D004218 ORTHO05D004938 6.6e-50 201.8 219 48.4
Nitab4.5_0009649g0010 Nicotiana tabacum HOM05D004218 ORTHO05D004938 6.6e-50 201.8 212 48.1
ECA236G4940 Erigeron canadensis HOM05D004218 ORTHO05D004938 1.1e-49 201.1 221 47.5
Gohir.A13G052700 Gossypium hirsutum HOM05D004218 ORTHO05D004938 1.1e-49 201.1 235 46.0
HPP92_000630 Vanilla planifolia HOM05D004218 ORTHO05D004938 4.3e-49 199.1 219 46.1
SEGI_07096 Sequoiadendron giganteum HOM05D004218 ORTHO05D004938 2.1e-48 196.8 219 46.6
unitig_749.g13251 Utricularia gibba HOM05D004218 ORTHO05D004938 4.8e-48 195.7 219 47.9
arahy.Tifrunner.gnm1.ann1.08CHDU Arachis hypogaea HOM05D004218 ORTHO05D004938 1.4e-47 194.1 219 47.0
AagrBONN_evm.TU.Sc2ySwM_362.1084 Anthoceros agrestis HOM05D004218 ORTHO05D004938 1.8e-47 193.7 219 47.5
arahy.Tifrunner.gnm1.ann1.VAP5EU Arachis hypogaea HOM05D004218 ORTHO05D004938 6.9e-47 191.8 220 47.3
C05p05130 Brassica napus HOM05D004218 ORTHO05D004938 1.5e-46 190.7 200 49.0
BolC7t42500H Brassica oleracea HOM05D004218 ORTHO05D004938 1.5e-46 190.7 133 69.2
SMO118G0107 Selaginella moellendorffii HOM05D004218 ORTHO05D004938 5.8e-46 188.7 219 47.9
Pp3c14_9960 Physcomitrium patens HOM05D004218 ORTHO05D004938 1.3e-45 187.6 219 48.4
EL10Ac6g13149 Beta vulgaris HOM05D004218 ORTHO05D004938 2.2e-45 186.8 219 46.6
Mapoly0004s0239 Marchantia polymorpha HOM05D004218 ORTHO05D004938 8.4e-45 184.9 219 47.0
Nitab4.5_0009146g0020 Nicotiana tabacum HOM05D004218 ORTHO05D004938 1.4e-44 184.1 191 48.7
C07p19850 Brassica napus HOM05D004218 ORTHO05D004938 6.0e-43 178.7 133 65.4
BolC7t42503H Brassica oleracea HOM05D004218 ORTHO05D004938 6.0e-43 178.7 133 65.4
SalBow2G1790 Salvia bowleyana HOM05D004218 ORTHO05D004938 1.5e-41 174.1 198 46.5
SalBow2G2061 Salvia bowleyana HOM05D004218 ORTHO05D004938 1.5e-41 174.1 198 46.5
Atru.chr11.1849 Acer truncatum HOM05D004218 ORTHO05D004938 4.9e-37 159.1 147 54.4
C07p19840 Brassica napus HOM05D004218 ORTHO05D004938 3.2e-36 156.4 111 67.6
FvH4_4g31940 Fragaria vesca HOM05D004218 ORTHO05D004938 3.0e-34 149.8 145 53.1
BolC8t49896H Brassica oleracea HOM05D004218 ORTHO05D004938 1.3e-32 144.4 80 81.2
AUR62026441 Chenopodium quinoa HOM05D004218 ORTHO05D004938 9.0e-31 138.3 145 51.0
Psat0s917g0040 Pisum sativum HOM05D004218 ORTHO05D004938 4.5e-30 136.0 145 48.3
AL8G21090 Arabidopsis lyrata HOM05D004218 ORTHO05D004938 4.9e-29 132.5 196 41.3
C07p19830 Brassica napus HOM05D004218 ORTHO05D004938 2.5e-28 130.2 76 82.9
Cre07.g342800 Chlamydomonas reinhardtii HOM05D004218 ORTHO05D004938 1.2e-22 111.3 256 31.2
PRCOL_00000833 Prasinoderma coloniale HOM05D004218 ORTHO05D004938 2.7e-19 100.1 223 32.3
Glyma.01G042500 Glycine max HOM05D004218 ORTHO05D004938 1.4e-18 97.8 144 41.7
Lj6A794G97 Lonicera japonica HOM05D004218 ORTHO05D004938 2.8e-16 90.1 109 47.7
Haze_12061 Corylus avellana HOM05D004218 ORTHO05D004938 1.1e-15 88.2 91 50.5
BcaC05g24668 Brassica carinata HOM05D004218 ORTHO05D002942 4.2e-12 76.3 72 55.6
AUR62026443 Chenopodium quinoa HOM05D004218 ORTHO05D004938 4.2e-12 76.3 64 50.0
CAN.G683.6 Capsicum annuum HOM05D004218 ORTHO05D004938 9.1e-07 58.5 56 48.2


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