Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G20120 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 7.5e-71 270.4 135 100.0
AL1G58110 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 2.1e-65 252.3 134 93.3
AL9U10530 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 4.7e-65 251.1 134 94.0
AL6G41320 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 8.0e-65 250.4 134 92.5
AL8G10620 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 1.0e-64 250.0 134 92.5
AL5G19890 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 1.4e-64 249.6 133 93.2
AL5G20070 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 1.4e-64 249.6 133 93.2
AL3G46750 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 1.5e-63 246.1 134 91.0
AL3G51240 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 4.1e-61 238.0 134 88.8
AL4G17480 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 1.1e-42 176.8 96 86.5
AL3G12590 Arabidopsis lyrata HOM05D010286 ORTHO05D012603 3.8e-38 161.8 137 60.6
AL3G51480 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 7.8e-36 154.1 137 57.7
BcaC06g34090 Brassica carinata HOM05D007774 ORTHO05D000309 4.3e-26 121.7 120 51.7
BcaNung03185 Brassica carinata HOM05D007774 ORTHO05D000309 6.2e-25 117.9 120 50.8
BcaB01g02983 Brassica carinata HOM05D007774 ORTHO05D000309 1.7e-22 109.8 125 49.6
AL8G21820 Arabidopsis lyrata HOM05D007774 ORTHO05D000309 1.9e-18 96.3 115 42.6
BolC2t09377H Brassica oleracea HOM05D007774 ORTHO05D000309 2.1e-17 92.8 118 46.6
Carub.0007s3110 Capsella rubella HOM05D010286 ORTHO05D000309 2.4e-16 89.4 105 46.7
Carub.0008s0717 Capsella rubella HOM05D010286 ORTHO05D000309 2.4e-16 89.4 86 51.2
BraA02t06986Z Brassica rapa HOM05D007774 ORTHO05D000309 4.0e-16 88.6 113 42.5
BolC6t36100H Brassica oleracea HOM05D007774 ORTHO05D000309 6.9e-16 87.8 105 50.5
BcaC02g10427 Brassica carinata HOM05D007774 ORTHO05D000309 2.0e-15 86.3 107 42.1
Carub.0001s3344 Capsella rubella HOM05D010286 ORTHO05D000309 2.0e-15 86.3 103 42.7
BcaC01g01743 Brassica carinata HOM05D007774 ORTHO05D000309 2.6e-15 85.9 93 50.5
BcaC02g10455 Brassica carinata HOM05D007774 ORTHO05D000309 4.5e-15 85.1 118 43.2
BraA09t41073Z Brassica rapa HOM05D007774 ORTHO05D000309 3.8e-14 82.0 103 43.7
BraA02t06821Z Brassica rapa HOM05D001038 ORTHO05D000395 6.4e-14 81.3 91 45.1
BcaC08g45193 Brassica carinata HOM05D007774 ORTHO05D000309 8.4e-14 80.9 100 45.0
BcaB01g02010 Brassica carinata HOM05D007774 ORTHO05D000309 1.4e-13 80.1 114 40.4
BcaB06g26508 Brassica carinata HOM05D007774 ORTHO05D000309 1.4e-13 80.1 95 45.3
BcaB08g35933 Brassica carinata HOM05D007774 ORTHO05D000309 1.4e-13 80.1 116 39.7
A01p38280 Brassica napus HOM05D001038 ORTHO05D000395 1.4e-13 80.1 89 46.1
BcaB06g27901 Brassica carinata HOM05D007774 ORTHO05D000309 1.9e-13 79.7 101 41.6
BraA02t08177Z Brassica rapa HOM05D007774 ORTHO05D000309 2.4e-13 79.3 100 44.0
BcaB02g11517 Brassica carinata HOM05D007774 ORTHO05D000309 3.2e-13 79.0 96 44.8
BcaB06g26754 Brassica carinata HOM05D007774 ORTHO05D000309 3.2e-13 79.0 96 44.8
BcaB06g27138 Brassica carinata HOM05D007774 ORTHO05D000309 3.2e-13 79.0 96 44.8
BcaNung05585 Brassica carinata HOM05D007774 ORTHO05D000309 3.2e-13 79.0 114 39.5
Carub.0029s0002 Capsella rubella HOM05D010286 ORTHO05D011981 4.2e-13 78.6 86 44.2
BcaB03g16006 Brassica carinata HOM05D007774 ORTHO05D000309 5.5e-13 78.2 99 38.4
BolC4t24443H Brassica oleracea HOM05D007774 ORTHO05D000309 5.5e-13 78.2 87 44.8
BcaB02g11205 Brassica carinata HOM05D007774 ORTHO05D000309 9.3e-13 77.4 96 43.8
BcaB06g26191 Brassica carinata HOM05D007774 ORTHO05D000309 9.3e-13 77.4 92 45.7
BcaB06g26683 Brassica carinata HOM05D007774 ORTHO05D000309 9.3e-13 77.4 96 43.8
BcaB06g27418 Brassica carinata HOM05D007774 ORTHO05D000309 9.3e-13 77.4 90 47.8
BcaC02g10529 Brassica carinata HOM05D007774 ORTHO05D000309 9.3e-13 77.4 100 44.0
BcaC04g22268 Brassica carinata HOM05D007774 ORTHO05D000309 9.3e-13 77.4 106 40.6
BcaC06g36173 Brassica carinata HOM05D007774 ORTHO05D000309 9.3e-13 77.4 90 47.8
BcaB07g33250 Brassica carinata HOM05D007774 ORTHO05D000309 1.2e-12 77.0 101 40.6
BcaB02g11020 Brassica carinata HOM05D007774 ORTHO05D000309 1.6e-12 76.6 118 39.0
BcaB03g16083 Brassica carinata HOM05D007774 ORTHO05D000309 1.6e-12 76.6 114 39.5
BcaB07g33982 Brassica carinata HOM05D007774 ORTHO05D000309 1.6e-12 76.6 98 44.9
BcaB01g02175 Brassica carinata HOM05D007774 ORTHO05D000309 2.7e-12 75.9 101 39.6
BcaB05g24508 Brassica carinata HOM05D001224 ORTHO05D000309 3.5e-12 75.5 83 44.6
BcaB06g27506 Brassica carinata HOM05D007774 ORTHO05D000309 3.5e-12 75.5 96 45.8
Carub.0029s0004 Capsella rubella HOM05D010286 ORTHO05D011981 3.5e-12 75.5 44 63.6
BcaB08g35546 Brassica carinata HOM05D007774 ORTHO05D000309 4.6e-12 75.1 98 43.9
BcaC04g20923 Brassica carinata HOM05D007774 ORTHO05D000395 4.6e-12 75.1 117 41.0
BcaC01g02929 Brassica carinata HOM05D007774 ORTHO05D000309 7.9e-12 74.3 98 44.9
C09p37880 Brassica napus HOM05D001038 ORTHO05D000395 7.9e-12 74.3 117 40.2
BolC9t56621H Brassica oleracea HOM05D001038 ORTHO05D000395 7.9e-12 74.3 117 40.2
BolC3t19075H Brassica oleracea HOM05D007774 ORTHO05D000309 1.0e-11 73.9 118 39.8
BcaB05g22492 Brassica carinata HOM05D007774 ORTHO05D000309 1.8e-11 73.2 107 38.3
BcaB05g22493 Brassica carinata HOM05D007774 ORTHO05D000309 1.8e-11 73.2 107 38.3
BcaC04g20915 Brassica carinata HOM05D007774 ORTHO05D000309 1.8e-11 73.2 118 39.0
Carub.0004s0648 Capsella rubella HOM05D010286 ORTHO05D000309 1.8e-11 73.2 89 43.8
BcaC08g43835 Brassica carinata HOM05D007774 ORTHO05D000309 3.0e-11 72.4 90 45.6
BcaB02g11463 Brassica carinata HOM05D001224 ORTHO05D000309 3.9e-11 72.0 83 43.4
BcaB02g11208 Brassica carinata HOM05D007774 ORTHO05D000309 1.9e-10 69.7 96 41.7
BcaB06g26646 Brassica carinata HOM05D007774 ORTHO05D000309 1.9e-10 69.7 95 42.1
BcaB05g23917 Brassica carinata HOM05D007774 ORTHO05D000309 2.5e-10 69.3 118 36.4
BcaC05g26851 Brassica carinata HOM05D007774 ORTHO05D000309 2.5e-10 69.3 80 47.5
BcaC06g36128 Brassica carinata HOM05D007774 ORTHO05D000395 2.5e-10 69.3 100 39.0
C07p07480 Brassica napus HOM05D001038 ORTHO05D000395 3.3e-10 68.9 100 38.0
BolC7t41165H Brassica oleracea HOM05D007774 ORTHO05D000309 3.3e-10 68.9 100 38.0
BcaC02g09596 Brassica carinata HOM05D007774 ORTHO05D000309 5.6e-10 68.2 118 38.1
BcaB04g16980 Brassica carinata HOM05D007774 ORTHO05D000309 7.4e-10 67.8 96 42.7
BcaC01g04381 Brassica carinata HOM05D007774 ORTHO05D000309 3.7e-09 65.5 70 51.4
BolC8t49307H Brassica oleracea HOM05D007774 ORTHO05D000309 4.8e-09 65.1 116 37.1
BcaB08g36585 Brassica carinata HOM05D007774 ORTHO05D000309 6.2e-09 64.7 91 41.8
BolC8t49310H Brassica oleracea HOM05D007774 ORTHO05D000309 2.4e-08 62.8 99 36.4
Hma1.2p1_1389F.1_g280030 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.1e-08 62.4 106 36.8
BcaC06g35818 Brassica carinata HOM05D007774 ORTHO05D000309 5.3e-08 61.6 117 30.8
AL7G49570 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 9.0e-08 60.8 49 55.1
AL6G38890 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 1.5e-07 60.1 75 38.7
BraA02t07615Z Brassica rapa HOM05D007774 ORTHO05D000309 1.5e-07 60.1 118 37.3
Psat0s2572g0080 Pisum sativum HOM05D018012 ORTHO05D000309 2.6e-07 59.3 109 33.9
BcaB05g23793 Brassica carinata HOM05D007774 ORTHO05D000309 5.8e-07 58.2 77 37.7
Psat3g069680 Pisum sativum HOM05D018012 ORTHO05D000309 1.0e-06 57.4 98 35.7
Lsat_1_v5_gn_9_280 Lactuca sativa HOM05D011072 ORTHO05D012603 2.2e-06 56.2 86 34.9
Eucgr.L01799 Eucalyptus grandis HOM05D001383 ORTHO05D000309 2.9e-06 55.8 96 32.3
Peaxi162Scf00039g00714 Petunia axillaris HOM05D001383 ORTHO05D000309 3.8e-06 55.5 73 37.0
Eucgr.L02287 Eucalyptus grandis HOM05D001383 ORTHO05D000309 4.9e-06 55.1 125 28.0
Cfa012747 Carpinus fangiana HOM05D016218 ORTHO05D000309 6.5e-06 54.7 60 41.7
Cfa017775 Carpinus fangiana HOM05D016218 ORTHO05D000309 6.5e-06 54.7 48 43.8
Hma1.2p1_0048F.1_g028060 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 6.5e-06 54.7 106 34.9
SGA_v2.0_scaffold3G01575 Striga asiatica HOM05D011630 ORTHO05D014269 6.5e-06 54.7 60 41.7
Lsat_1_v5_gn_2_25761 Lactuca sativa HOM05D021679 ORTHO05D022849 8.4e-06 54.3 83 37.3
Rhsim01G0020400 Rhododendron simsii HOM05D001383 ORTHO05D000309 8.4e-06 54.3 91 35.2


User provided reference genes

Program Settings