Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G20040 Arabidopsis lyrata HOM05D001393 ORTHO05D007477 0.0e+00 1418.7 753 100.0
AT5G47940 Arabidopsis thaliana HOM05D001393 ORTHO05D007477 2.8e-300 1035.0 784 75.4
Carub.0008s0749 Capsella rubella HOM05D001393 ORTHO05D007477 2.1e-287 992.3 783 72.8
Sp2g18440 Schrenkiella parvula HOM05D001393 ORTHO05D007477 4.6e-279 964.5 811 68.8
Thhalv10003674m.g Eutrema salsugineum HOM05D001393 ORTHO05D007477 8.2e-268 927.2 811 68.3
CARHR184320 Cardamine hirsuta HOM05D001393 ORTHO05D007477 2.7e-234 815.8 775 63.9
A06p39440 Brassica napus HOM05D001393 ORTHO05D007477 4.6e-234 815.1 780 61.2
BraA06t26859Z Brassica rapa HOM05D001393 ORTHO05D007477 4.6e-234 815.1 780 61.2
C07p38830 Brassica napus HOM05D001393 ORTHO05D007477 6.8e-230 801.2 776 61.5
BolC7t44402H Brassica oleracea HOM05D001393 ORTHO05D007477 1.9e-227 793.1 773 61.2
Aa31LG11G7400 Aethionema arabicum HOM05D001393 ORTHO05D007477 1.1e-192 677.6 797 53.7
BcaC06g30834 Brassica carinata HOM05D001393 ORTHO05D007477 1.4e-182 644.0 712 56.2
Potri.001G265100 Populus trichocarpa HOM05D001393 ORTHO05D007477 9.2e-94 349.0 832 33.9
Manes.10G141000 Manihot esculenta HOM05D001393 ORTHO05D007477 2.1e-93 347.8 833 35.9
Ciclev10030722m.g Citrus clementina HOM05D001393 ORTHO05D007477 4.6e-93 346.7 796 35.9
Thecc.01G409700 Theobroma cacao HOM05D001393 ORTHO05D007477 3.4e-88 330.5 814 34.0
Cfa010777 Carpinus fangiana HOM05D001393 ORTHO05D007477 5.4e-86 323.2 806 34.1
Prupe.2G015000 Prunus persica HOM05D001393 ORTHO05D007477 1.2e-85 322.0 833 33.7
Cpa.g.sc125.11 Carica papaya HOM05D001393 ORTHO05D007477 3.5e-85 320.5 791 35.4
CiPaw.14G000700 Carya illinoinensis HOM05D001393 ORTHO05D007477 2.3e-84 317.8 815 33.4
FAN06G3336 Fragaria x ananassa HOM05D001393 ORTHO05D007477 3.0e-84 317.4 816 33.2
FvH4_7g01170 Fragaria vesca HOM05D001393 ORTHO05D007477 3.9e-84 317.0 816 33.3
Sabra16G0162900 Salix brachista HOM05D001393 ORTHO05D007477 3.9e-84 317.0 817 32.9
COL.COLO4_04862 Corchorus olitorius HOM05D001393 ORTHO05D007477 1.1e-83 315.5 845 32.5
Atru.chr11.2612 Acer truncatum HOM05D001393 ORTHO05D007477 1.6e-82 311.6 802 32.9
Duzib133G0545 Durio zibethinus HOM05D001393 ORTHO05D007477 4.8e-82 310.1 782 34.3
Gohir.A08G143900 Gossypium hirsutum HOM05D001393 ORTHO05D007477 1.1e-81 308.9 829 33.9
MD02G1309200 Malus domestica HOM05D001393 ORTHO05D007477 1.4e-81 308.5 822 33.2
FAN03G3510 Fragaria x ananassa HOM05D001393 ORTHO05D007477 3.4e-80 303.9 817 33.0
Gohir.D08G164900 Gossypium hirsutum HOM05D001393 ORTHO05D007477 7.6e-80 302.8 763 34.9
Gorai.004G171900 Gossypium raimondii HOM05D001393 ORTHO05D007477 9.9e-80 302.4 769 34.7
QL04p008271 Quercus lobata HOM05D001393 ORTHO05D007477 8.4e-79 299.3 810 32.8
FAN01G2686 Fragaria x ananassa HOM05D001393 ORTHO05D007477 4.2e-78 297.0 815 32.5
GSVIVG01032121001 Vitis vinifera HOM05D001393 ORTHO05D007477 2.1e-77 294.7 770 33.5
RcHm_v2.0_Chr1g0316471 Rosa chinensis HOM05D001393 ORTHO05D007477 5.6e-75 286.6 819 32.1
FAN03G1765 Fragaria x ananassa HOM05D001393 ORTHO05D007477 1.3e-74 285.4 840 32.0
Eucgr.J01280 Eucalyptus grandis HOM05D001393 ORTHO05D007477 1.6e-74 285.0 795 30.8
CANSAT80G1121 Cannabis sativa HOM05D001393 ORTHO05D007477 7.6e-72 276.2 797 32.6
TWI73G0713 Tripterygium wilfordii HOM05D001393 ORTHO05D007477 9.9e-72 275.8 541 37.0
Glyma.09G228900 Glycine max HOM05D001393 ORTHO05D007477 7.9e-69 266.2 835 33.4
TWI09G0484 Tripterygium wilfordii HOM05D001393 ORTHO05D007477 8.7e-68 262.7 550 37.8
Sed0015725 Sechium edule HOM05D001393 ORTHO05D007477 4.3e-67 260.4 839 30.6
Potri.009G060000 Populus trichocarpa HOM05D001393 ORTHO05D007477 5.6e-67 260.0 629 32.6
vmacro13675 Vaccinium macrocarpon HOM05D001393 ORTHO05D007477 9.6e-67 259.2 803 32.4
Phvul.011G009600 Phaseolus vulgaris HOM05D001393 ORTHO05D007477 6.2e-66 256.5 798 30.1
PGR044G2234 Punica granatum HOM05D001393 ORTHO05D007477 8.2e-66 256.1 768 31.0
Actinidia21547 Actinidia chinensis HOM05D001393 ORTHO05D007477 2.4e-65 254.6 828 30.4
VMungo1127G2137 Vigna mungo HOM05D001393 ORTHO05D007477 3.1e-65 254.2 796 32.3
ClCG09G004070 Citrullus lanatus HOM05D001393 ORTHO05D007477 1.5e-64 251.9 825 31.4
Solyc11g007060.2 Solanum lycopersicum HOM05D001393 ORTHO05D007477 1.0e-63 249.2 820 30.6
AUR62023073 Chenopodium quinoa HOM05D001393 ORTHO05D007477 1.7e-63 248.4 773 30.9
arahy.Tifrunner.gnm1.ann1.S6CP9J Arachis hypogaea HOM05D001393 ORTHO05D007477 2.9e-63 247.7 811 30.0
arahy.Tifrunner.gnm1.ann1.C4Q3NJ Arachis hypogaea HOM05D001393 ORTHO05D007477 3.8e-63 247.3 808 30.1
CSS0038724 Camellia sinensis var. sinensis HOM05D001393 ORTHO05D007477 3.8e-63 247.3 571 35.6
Ca_19581_v3 Cicer arietinum L. HOM05D001393 ORTHO05D007477 1.4e-62 245.4 831 31.9
Sopen11g002980 Solanum pennellii HOM05D001393 ORTHO05D007477 2.5e-62 244.6 840 29.9
Lj3g0000057 Lotus japonicus HOM05D001393 ORTHO05D007477 6.0e-61 240.0 844 30.9
Medtr4g037495 Medicago truncatula HOM05D001393 ORTHO05D007477 6.0e-61 240.0 826 31.4
Glyma.12G007700 Glycine max HOM05D001393 ORTHO05D007477 3.0e-60 237.7 837 30.5
PGSC0003DMG401023992 Solanum tuberosum HOM05D001393 ORTHO05D007477 3.9e-60 237.3 855 29.6
MELO3C023559.2 Cucumis melo HOM05D001393 ORTHO05D007477 1.1e-59 235.7 857 30.3
Dinv09348 Davidia involucrata HOM05D001393 ORTHO05D007477 1.5e-59 235.3 724 31.9
CsaV3_7G030970 Cucumis sativus L. HOM05D001393 ORTHO05D007477 3.3e-59 234.2 783 31.2
Psat7g196360 Pisum sativum HOM05D001393 ORTHO05D007477 2.2e-58 231.5 776 31.6
Nn2g15307 Nelumbo nucifera HOM05D001393 ORTHO05D007477 2.4e-57 228.0 887 28.7
TPR.G3660 Trifolium pratense HOM05D001393 ORTHO05D007477 6.9e-57 226.5 797 30.2
Migut.N01605 Erythranthe guttata HOM05D001393 ORTHO05D007477 2.6e-56 224.6 727 31.2
MSTRG.28063 Avicennia marina HOM05D001393 ORTHO05D007477 3.4e-56 224.2 563 33.6
CAN.G1513.5 Capsicum annuum HOM05D001393 ORTHO05D007477 2.2e-55 221.5 817 28.4
TAR623G0231 Trochodendron aralioides HOM05D001393 ORTHO05D007477 2.2e-55 221.5 553 34.4
PSO384G0142 Papaver somniferum HOM05D001393 ORTHO05D007477 5.0e-55 220.3 424 36.1
MD07G1012500 Malus domestica HOM05D001393 ORTHO05D007477 1.1e-54 219.2 702 29.9
PSO339G5226 Papaver somniferum HOM05D001393 ORTHO05D007477 1.1e-54 219.2 405 36.8
MBI04_g36081_MAGBIO Magnolia biondii HOM05D001393 ORTHO05D007477 3.2e-54 217.6 593 32.9
EL10Ac2g04339 Beta vulgaris HOM05D001393 ORTHO05D007477 2.1e-53 214.9 797 28.7
Sc11g0009120 Simmondsia chinensis HOM05D001393 ORTHO05D007477 7.9e-53 213.0 761 31.0
Dinv43433 Davidia involucrata HOM05D001393 ORTHO05D007477 3.0e-52 211.1 301 42.9
HanXRQChr09g0251311 Helianthus annuus HOM05D001393 ORTHO05D007477 3.9e-52 210.7 733 31.8
Lalb_Chr19g0140311 Lupinus albus HOM05D001393 ORTHO05D007477 8.7e-52 209.5 854 27.8
Cc02_g28120 Coffea canephora HOM05D001393 ORTHO05D007477 1.5e-51 208.8 409 35.0
AUR62009391 Chenopodium quinoa HOM05D001393 ORTHO05D007477 1.9e-51 208.4 763 28.7
SGA_v2.0_scaffold5G02964 Striga asiatica HOM05D001393 ORTHO05D007477 5.7e-51 206.8 553 33.8
DCAR_029678 Daucus carota HOM05D001393 ORTHO05D007477 9.7e-51 206.1 556 30.2
Aqoxy1G00280 Aquilegia oxysepala HOM05D001393 ORTHO05D007477 4.8e-50 203.8 557 29.4
Oeu049495.1 Olea europaea HOM05D001393 ORTHO05D007477 1.1e-49 202.6 537 30.7
SalBow7G4183 Salvia bowleyana HOM05D001393 ORTHO05D007477 1.4e-49 202.2 804 28.7
Peaxi162Scf00152g01336 Petunia axillaris HOM05D001393 ORTHO05D007477 9.1e-49 199.5 394 34.8
Lsat_1_v5_gn_1_106561 Lactuca sativa HOM05D001393 ORTHO05D007477 5.0e-47 193.7 503 32.6
MSTRG.5028 Avicennia marina HOM05D001393 ORTHO05D007477 6.5e-47 193.4 604 31.6
Hund21482 Selenicereus undatus HOM05D001393 ORTHO05D007477 3.2e-46 191.0 571 29.2
Nitab4.5_0000001g0230 Nicotiana tabacum HOM05D001393 ORTHO05D007477 7.9e-45 186.4 792 28.0
Sabra09G0044200 Salix brachista HOM05D001393 ORTHO05D007477 6.7e-44 183.3 797 27.6
Nitab4.5_0001761g0330 Nicotiana tabacum HOM05D001393 ORTHO05D007477 7.4e-43 179.9 773 27.2
SalBow6G6124 Salvia bowleyana HOM05D001393 ORTHO05D007477 4.8e-42 177.2 588 31.0
CDE05G0268 Ceratophyllum demersum HOM05D001393 ORTHO05D007477 5.3e-41 173.7 401 32.4
Duzib138G1437 Durio zibethinus HOM05D001393 ORTHO05D007477 2.5e-38 164.9 604 30.3
Zm00001eb107220 Zea mays HOM05D001393 ORTHO05D007477 4.2e-38 164.1 622 27.3
Zm00001eb324710 Zea mays HOM05D001393 ORTHO05D007477 1.6e-37 162.2 632 27.8
ATR0332G069 Amborella trichopoda HOM05D001393 ORTHO05D007477 1.0e-36 159.5 438 30.1
Os07g0569000 Oryza sativa ssp. japonica HOM05D001393 ORTHO05D007477 1.4e-33 149.1 758 26.3
HPP92_015712 Vanilla planifolia HOM05D001393 ORTHO05D007477 3.5e-32 144.4 585 27.7
unitig_578.g16692 Utricularia gibba HOM05D001393 ORTHO05D007477 7.7e-32 143.3 777 27.0
FAN10G3273 Fragaria x ananassa HOM05D001393 ORTHO05D007477 1.9e-30 138.7 173 45.7
HPP92_026649 Vanilla planifolia HOM05D001393 ORTHO05D007477 2.5e-30 138.3 595 26.7
ECA248G1228 Erigeron canadensis HOM05D001393 ORTHO05D007477 5.2e-28 130.6 594 29.6
Ah.10g038800 Amaranthus hybridus HOM05D001393 ORTHO05D007477 8.8e-20 103.2 562 24.2
Lj9A633T62 Lonicera japonica HOM05D001393 ORTHO05D007477 9.1e-17 93.2 587 26.9
Eucgr.J01288 Eucalyptus grandis HOM05D001393 ORTHO05D007477 6.5e-15 87.0 136 36.0
SEGI_24281 Sequoiadendron giganteum HOM05D000890 ORTHO05D007477 7.8e-08 63.5 127 32.3
SEGI_29291 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 7.8e-08 63.5 127 32.3


User provided reference genes

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