Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G19430 Arabidopsis lyrata HOM05D008895 ORTHO05D010761 1.3e-44 182.6 84 100.0
AL8G19420 Arabidopsis lyrata HOM05D008895 ORTHO05D010761 1.5e-40 169.1 84 92.9
AL8G19452 Arabidopsis lyrata HOM05D008895 ORTHO05D010761 1.5e-40 169.1 84 92.9
AL8G19400 Arabidopsis lyrata HOM05D008895 ORTHO05D010761 1.2e-39 166.0 84 91.7
AL8G19410 Arabidopsis lyrata HOM05D008895 ORTHO05D010761 1.2e-39 166.0 84 91.7
AT5G42232 Arabidopsis thaliana HOM05D008895 ORTHO05D010761 1.3e-28 129.4 84 75.0
AT5G42235 Arabidopsis thaliana HOM05D008895 ORTHO05D010761 6.4e-28 127.1 83 67.5
Carub.0008s0699 Capsella rubella HOM05D008895 ORTHO05D010761 8.3e-20 100.1 83 60.2
CARHR028360 Cardamine hirsuta HOM05D009058 ORTHO05D010761 1.2e-18 96.3 84 56.0
Carub.0008s0698 Capsella rubella HOM05D008895 ORTHO05D010761 1.6e-18 95.9 84 58.3
AT2G12465 Arabidopsis thaliana HOM05D008895 ORTHO05D010761 3.3e-16 88.2 86 53.5
AT5G42223 Arabidopsis thaliana HOM05D008895 ORTHO05D038671 4.4e-13 77.8 89 51.7
A08p15980 Brassica napus HOM05D008895 ORTHO05D012825 5.8e-13 77.4 83 45.8
BraA08t33570Z Brassica rapa HOM05D008895 ORTHO05D012825 5.8e-13 77.4 83 45.8
AL8G19480 Arabidopsis lyrata HOM05D009997 ORTHO05D038671 7.6e-13 77.0 88 50.0
Carub.0003s2779 Capsella rubella HOM05D008895 ORTHO05D010761 1.7e-12 75.9 84 45.2
BolC3t20732H Brassica oleracea HOM05D008895 ORTHO05D012825 2.9e-12 75.1 83 44.6
Carub.0003s3322 Capsella rubella HOM05D008895 ORTHO05D010761 3.8e-12 74.7 83 48.2
CARHR052530 Cardamine hirsuta HOM05D008895 ORTHO05D010761 8.4e-12 73.6 82 41.5
AT2G12475 Arabidopsis thaliana HOM05D008895 ORTHO05D010761 3.2e-11 71.6 84 44.0
AL6G39510 Arabidopsis lyrata HOM05D008895 ORTHO05D031419 5.4e-11 70.9 84 47.6
AL2G17930 Arabidopsis lyrata HOM05D008895 ORTHO05D010761 1.6e-10 69.3 81 46.9
AT1G58055 Arabidopsis thaliana HOM05D008895 ORTHO05D010761 2.1e-10 68.9 81 45.7
BolC7t42591H Brassica oleracea HOM05D009997 ORTHO05D011114 7.8e-10 67.0 87 48.3
C03p55150 Brassica napus HOM05D008895 ORTHO05D012825 3.9e-09 64.7 81 39.5
BolC3t17787H Brassica oleracea HOM05D008895 ORTHO05D012825 3.9e-09 64.7 81 39.5
Thhalv10015910m.g Eutrema salsugineum HOM05D009997 ORTHO05D011114 5.1e-09 64.3 87 43.7
BraA07t29157Z Brassica rapa HOM05D009997 ORTHO05D011114 1.9e-08 62.4 87 44.8
Thhalv10012291m.g Eutrema salsugineum HOM05D009997 ORTHO05D013470 2.5e-08 62.0 82 45.1
AL1G27870 Arabidopsis lyrata HOM05D009997 ORTHO05D013470 4.3e-08 61.2 86 43.0
C03p55210 Brassica napus HOM05D008895 ORTHO05D012825 4.3e-08 61.2 81 38.3
BolC3t17794H Brassica oleracea HOM05D008895 ORTHO05D012825 4.3e-08 61.2 81 38.3
BcaB03g14524 Brassica carinata HOM05D009997 ORTHO05D013470 5.6e-08 60.8 90 41.1
A03p44450 Brassica napus HOM05D008895 ORTHO05D012825 5.6e-08 60.8 81 38.3
C03p55220 Brassica napus HOM05D008895 ORTHO05D012825 5.6e-08 60.8 81 38.3
BolC3t17795H Brassica oleracea HOM05D008895 ORTHO05D012825 5.6e-08 60.8 81 38.3
BraA03t13578Z Brassica rapa HOM05D008895 ORTHO05D012825 5.6e-08 60.8 81 38.3
Thhalv10015154m.g Eutrema salsugineum HOM05D009997 ORTHO05D013470 7.3e-08 60.5 82 45.1
C03p55160 Brassica napus HOM05D008895 ORTHO05D012825 9.6e-08 60.1 81 38.3
C03p55190 Brassica napus HOM05D008895 ORTHO05D012825 9.6e-08 60.1 81 38.3
C03p55200 Brassica napus HOM05D008895 ORTHO05D012825 9.6e-08 60.1 81 38.3
BolC3t17788H Brassica oleracea HOM05D008895 ORTHO05D012825 9.6e-08 60.1 81 38.3
BolC3t17792H Brassica oleracea HOM05D008895 ORTHO05D012825 9.6e-08 60.1 81 38.3
Carub.0003s2778 Capsella rubella HOM05D009997 ORTHO05D013532 1.6e-07 59.3 83 41.0
Carub.0007s3316 Capsella rubella HOM05D009997 ORTHO05D013470 2.8e-07 58.5 90 43.3
Thhalv10017522m.g Eutrema salsugineum HOM05D008895 ORTHO05D010761 2.8e-07 58.5 75 44.0
AT1G15757 Arabidopsis thaliana HOM05D009997 ORTHO05D013470 4.7e-07 57.8 86 43.0
AT5G27495 Arabidopsis thaliana HOM05D008895 ORTHO05D031419 8.1e-07 57.0 85 42.4
A03p11850 Brassica napus HOM05D009997 ORTHO05D013470 8.1e-07 57.0 83 41.0
CARHR136110 Cardamine hirsuta HOM05D009157 ORTHO05D011114 1.1e-06 56.6 84 44.0
C03p13920 Brassica napus HOM05D009997 ORTHO05D013470 1.4e-06 56.2 83 41.0
BolC3t13839H Brassica oleracea HOM05D009997 ORTHO05D013470 1.4e-06 56.2 83 39.8
C05p19330 Brassica napus HOM05D009157 ORTHO05D011114 1.8e-06 55.8 83 42.2
BraA03t10496Z Brassica rapa HOM05D009997 ORTHO05D013470 1.8e-06 55.8 83 39.8
Carub.0001s1553 Capsella rubella HOM05D009997 ORTHO05D013470 3.1e-06 55.1 91 44.0
BcaC07g41482 Brassica carinata HOM05D009997 ORTHO05D013470 4.0e-06 54.7 93 38.7
C08p44800 Brassica napus HOM05D009997 ORTHO05D013470 4.0e-06 54.7 93 38.7
BolC8t52025H Brassica oleracea HOM05D009997 ORTHO05D013470 4.0e-06 54.7 93 38.7
Sp1g14050 Schrenkiella parvula HOM05D009997 ORTHO05D013470 4.0e-06 54.7 90 42.2


User provided reference genes

Program Settings