Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G19410 Arabidopsis lyrata HOM05D008895 ORTHO05D010761 1.8e-43 178.7 84 100.0
AL8G19420 Arabidopsis lyrata HOM05D008895 ORTHO05D010761 1.2e-42 176.0 84 98.8
AL8G19452 Arabidopsis lyrata HOM05D008895 ORTHO05D010761 1.2e-42 176.0 84 98.8
AL8G19400 Arabidopsis lyrata HOM05D008895 ORTHO05D010761 1.0e-41 172.9 84 97.6
AL8G19430 Arabidopsis lyrata HOM05D008895 ORTHO05D010761 2.8e-39 164.9 84 91.7
AT5G42232 Arabidopsis thaliana HOM05D008895 ORTHO05D010761 1.7e-28 129.0 84 76.2
AT5G42235 Arabidopsis thaliana HOM05D008895 ORTHO05D010761 7.8e-26 120.2 83 66.3
Carub.0008s0699 Capsella rubella HOM05D008895 ORTHO05D010761 5.8e-21 104.0 83 62.7
Carub.0008s0698 Capsella rubella HOM05D008895 ORTHO05D010761 1.0e-17 93.2 84 59.5
CARHR028360 Cardamine hirsuta HOM05D009058 ORTHO05D010761 1.7e-17 92.4 84 56.0
AT2G12465 Arabidopsis thaliana HOM05D008895 ORTHO05D010761 4.3e-16 87.8 86 53.5
A08p15980 Brassica napus HOM05D008895 ORTHO05D012825 5.8e-13 77.4 83 48.2
BraA08t33570Z Brassica rapa HOM05D008895 ORTHO05D012825 5.8e-13 77.4 83 48.2
AT5G42223 Arabidopsis thaliana HOM05D008895 ORTHO05D038671 9.9e-13 76.6 89 51.7
Carub.0003s3322 Capsella rubella HOM05D008895 ORTHO05D010761 1.3e-12 76.3 83 49.4
BolC3t20732H Brassica oleracea HOM05D008895 ORTHO05D012825 2.9e-12 75.1 83 47.0
AL8G19480 Arabidopsis lyrata HOM05D009997 ORTHO05D038671 4.9e-12 74.3 88 50.0
Carub.0003s2779 Capsella rubella HOM05D008895 ORTHO05D010761 4.9e-12 74.3 84 45.2
CARHR052530 Cardamine hirsuta HOM05D008895 ORTHO05D010761 5.4e-11 70.9 82 41.5
AT2G12475 Arabidopsis thaliana HOM05D008895 ORTHO05D010761 2.1e-10 68.9 84 44.0
AL6G39510 Arabidopsis lyrata HOM05D008895 ORTHO05D031419 2.3e-09 65.5 84 46.4
AL2G17930 Arabidopsis lyrata HOM05D008895 ORTHO05D010761 6.6e-09 63.9 81 45.7
AT1G58055 Arabidopsis thaliana HOM05D008895 ORTHO05D010761 8.7e-09 63.5 81 44.4
BolC7t42591H Brassica oleracea HOM05D009997 ORTHO05D011114 1.1e-08 63.2 87 46.0
Thhalv10015910m.g Eutrema salsugineum HOM05D009997 ORTHO05D011114 7.3e-08 60.5 87 42.5
C03p55210 Brassica napus HOM05D008895 ORTHO05D012825 1.6e-07 59.3 81 39.5
BolC3t17794H Brassica oleracea HOM05D008895 ORTHO05D012825 1.6e-07 59.3 81 39.5
BraA07t29157Z Brassica rapa HOM05D009997 ORTHO05D011114 1.6e-07 59.3 87 43.7
A03p44450 Brassica napus HOM05D008895 ORTHO05D012825 2.1e-07 58.9 81 39.5
C03p55150 Brassica napus HOM05D008895 ORTHO05D012825 2.1e-07 58.9 81 38.3
C03p55220 Brassica napus HOM05D008895 ORTHO05D012825 2.1e-07 58.9 81 39.5
BolC3t17787H Brassica oleracea HOM05D008895 ORTHO05D012825 2.1e-07 58.9 81 38.3
BolC3t17795H Brassica oleracea HOM05D008895 ORTHO05D012825 2.1e-07 58.9 81 39.5
BraA03t13578Z Brassica rapa HOM05D008895 ORTHO05D012825 2.1e-07 58.9 81 39.5
Thhalv10012291m.g Eutrema salsugineum HOM05D009997 ORTHO05D013470 2.8e-07 58.5 82 43.9
Thhalv10015154m.g Eutrema salsugineum HOM05D009997 ORTHO05D013470 6.2e-07 57.4 82 43.9
C03p55160 Brassica napus HOM05D008895 ORTHO05D012825 1.1e-06 56.6 81 38.3
C03p55190 Brassica napus HOM05D008895 ORTHO05D012825 1.1e-06 56.6 81 38.3
C03p55200 Brassica napus HOM05D008895 ORTHO05D012825 1.1e-06 56.6 81 38.3
BolC3t17788H Brassica oleracea HOM05D008895 ORTHO05D012825 1.1e-06 56.6 81 38.3
BolC3t17792H Brassica oleracea HOM05D008895 ORTHO05D012825 1.1e-06 56.6 81 38.3
BcaB03g14524 Brassica carinata HOM05D009997 ORTHO05D013470 1.4e-06 56.2 90 40.0
A03p11850 Brassica napus HOM05D009997 ORTHO05D013470 1.4e-06 56.2 83 41.0
AL1G27870 Arabidopsis lyrata HOM05D009997 ORTHO05D013470 1.8e-06 55.8 86 41.9
Thhalv10017522m.g Eutrema salsugineum HOM05D008895 ORTHO05D010761 1.8e-06 55.8 75 42.7
C03p13920 Brassica napus HOM05D009997 ORTHO05D013470 2.4e-06 55.5 83 41.0
BolC3t13839H Brassica oleracea HOM05D009997 ORTHO05D013470 2.4e-06 55.5 83 39.8
Carub.0003s2778 Capsella rubella HOM05D009997 ORTHO05D013532 2.4e-06 55.5 84 41.7
BraA03t10496Z Brassica rapa HOM05D009997 ORTHO05D013470 3.1e-06 55.1 83 39.8
AT1G15757 Arabidopsis thaliana HOM05D009997 ORTHO05D013470 9.0e-06 53.5 86 41.9
CARHR136110 Cardamine hirsuta HOM05D009157 ORTHO05D011114 9.0e-06 53.5 84 42.9


User provided reference genes

Program Settings