Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G19400 Arabidopsis lyrata HOM05D008895 ORTHO05D010761 5.4e-43 177.2 84 100.0
AL8G19420 Arabidopsis lyrata HOM05D008895 ORTHO05D010761 2.0e-42 175.3 84 98.8
AL8G19452 Arabidopsis lyrata HOM05D008895 ORTHO05D010761 2.0e-42 175.3 84 98.8
AL8G19410 Arabidopsis lyrata HOM05D008895 ORTHO05D010761 1.7e-41 172.2 84 97.6
AL8G19430 Arabidopsis lyrata HOM05D008895 ORTHO05D010761 4.7e-39 164.1 84 91.7
AT5G42232 Arabidopsis thaliana HOM05D008895 ORTHO05D010761 1.9e-27 125.6 84 75.0
AT5G42235 Arabidopsis thaliana HOM05D008895 ORTHO05D010761 1.3e-25 119.4 83 66.3
Carub.0008s0699 Capsella rubella HOM05D008895 ORTHO05D010761 8.3e-20 100.1 83 61.4
CARHR028360 Cardamine hirsuta HOM05D009058 ORTHO05D010761 3.9e-17 91.3 84 56.0
Carub.0008s0698 Capsella rubella HOM05D008895 ORTHO05D010761 2.5e-16 88.6 84 58.3
AT2G12465 Arabidopsis thaliana HOM05D008895 ORTHO05D010761 8.1e-15 83.6 86 52.3
A08p15980 Brassica napus HOM05D008895 ORTHO05D012825 6.4e-12 73.9 83 47.0
BraA08t33570Z Brassica rapa HOM05D008895 ORTHO05D012825 6.4e-12 73.9 83 47.0
Carub.0003s2779 Capsella rubella HOM05D008895 ORTHO05D010761 6.4e-12 73.9 84 45.2
AT5G42223 Arabidopsis thaliana HOM05D008895 ORTHO05D038671 1.1e-11 73.2 89 50.6
Carub.0003s3322 Capsella rubella HOM05D008895 ORTHO05D010761 1.1e-11 73.2 83 48.2
BolC3t20732H Brassica oleracea HOM05D008895 ORTHO05D012825 3.2e-11 71.6 83 45.8
AL8G19480 Arabidopsis lyrata HOM05D009997 ORTHO05D038671 5.4e-11 70.9 88 48.9
CARHR052530 Cardamine hirsuta HOM05D008895 ORTHO05D010761 7.1e-11 70.5 82 41.5
AT2G12475 Arabidopsis thaliana HOM05D008895 ORTHO05D010761 2.7e-10 68.6 84 44.0
AL6G39510 Arabidopsis lyrata HOM05D008895 ORTHO05D031419 1.3e-09 66.2 84 46.4
AL2G17930 Arabidopsis lyrata HOM05D008895 ORTHO05D010761 8.7e-09 63.5 81 45.7
AT1G58055 Arabidopsis thaliana HOM05D008895 ORTHO05D010761 1.2e-07 59.7 81 43.2
BolC7t42591H Brassica oleracea HOM05D009997 ORTHO05D011114 2.1e-07 58.9 87 44.8
Thhalv10012291m.g Eutrema salsugineum HOM05D009997 ORTHO05D013470 6.2e-07 57.4 82 43.9
Thhalv10015910m.g Eutrema salsugineum HOM05D009997 ORTHO05D011114 1.4e-06 56.2 87 41.4
BraA07t29157Z Brassica rapa HOM05D009997 ORTHO05D011114 2.4e-06 55.5 87 42.5
AL1G27870 Arabidopsis lyrata HOM05D009997 ORTHO05D013470 3.1e-06 55.1 86 41.9
BcaB03g14524 Brassica carinata HOM05D009997 ORTHO05D013470 3.1e-06 55.1 90 40.0
A03p11850 Brassica napus HOM05D009997 ORTHO05D013470 3.1e-06 55.1 83 41.0
Carub.0003s2778 Capsella rubella HOM05D009997 ORTHO05D013532 3.1e-06 55.1 84 41.7
Thhalv10015154m.g Eutrema salsugineum HOM05D009997 ORTHO05D013470 3.1e-06 55.1 82 43.9
CARHR136110 Cardamine hirsuta HOM05D009157 ORTHO05D011114 4.0e-06 54.7 84 44.0
C03p13920 Brassica napus HOM05D009997 ORTHO05D013470 5.2e-06 54.3 83 41.0
BolC3t13839H Brassica oleracea HOM05D009997 ORTHO05D013470 5.2e-06 54.3 83 39.8
C03p55210 Brassica napus HOM05D008895 ORTHO05D012825 6.9e-06 53.9 81 38.3
BolC3t17794H Brassica oleracea HOM05D008895 ORTHO05D012825 6.9e-06 53.9 81 38.3
BraA03t10496Z Brassica rapa HOM05D009997 ORTHO05D013470 6.9e-06 53.9 83 39.8
A03p44450 Brassica napus HOM05D008895 ORTHO05D012825 9.0e-06 53.5 81 38.3
C03p55150 Brassica napus HOM05D008895 ORTHO05D012825 9.0e-06 53.5 81 37.0
C03p55220 Brassica napus HOM05D008895 ORTHO05D012825 9.0e-06 53.5 81 38.3
BolC3t17787H Brassica oleracea HOM05D008895 ORTHO05D012825 9.0e-06 53.5 81 37.0
BolC3t17795H Brassica oleracea HOM05D008895 ORTHO05D012825 9.0e-06 53.5 81 38.3
BraA03t13578Z Brassica rapa HOM05D008895 ORTHO05D012825 9.0e-06 53.5 81 38.3


User provided reference genes

Program Settings