Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G19370 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 1.2e-70 269.6 125 100.0
AT5G42242 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 3.3e-57 224.9 125 84.0
Carub.0008s0696 Capsella rubella HOM05D006945 ORTHO05D005549 4.5e-54 214.5 126 77.8
Thhalv10026566m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 1.2e-33 146.7 129 56.6
AT5G38330 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 3.4e-33 145.2 127 56.7
AL7G52460 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 5.9e-30 134.4 143 49.0
Sp7g27870 Schrenkiella parvula HOM05D006945 ORTHO05D005549 5.9e-30 134.4 122 50.0
CARHR237970 Cardamine hirsuta HOM05D006945 ORTHO05D005549 2.3e-29 132.5 125 51.2
Carub.0004s0716 Capsella rubella HOM05D006945 ORTHO05D005549 5.0e-29 131.3 133 49.6
AT4G30070 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 6.6e-29 131.0 128 52.3
AL7G22140 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 8.6e-29 130.6 129 51.2
Carub.0007s1055 Capsella rubella HOM05D006945 ORTHO05D005549 1.1e-28 130.2 134 48.5
BcaNung02066 Brassica carinata HOM05D006945 ORTHO05D005549 3.6e-27 125.2 131 50.4
BcaNung02068 Brassica carinata HOM05D006945 ORTHO05D005549 3.6e-27 125.2 131 50.4
BcaNung02932 Brassica carinata HOM05D006945 ORTHO05D005549 4.7e-27 124.8 131 47.3
C07p57440 Brassica napus HOM05D006945 ORTHO05D005549 5.2e-26 121.3 132 47.7
BolC6t36787H Brassica oleracea HOM05D006945 ORTHO05D005549 2.0e-25 119.4 129 48.1
BolC7t46212H Brassica oleracea HOM05D006945 ORTHO05D005549 2.6e-25 119.0 132 47.0
A03p59240 Brassica napus HOM05D006945 ORTHO05D005549 7.5e-25 117.5 129 47.3
C07p62500 Brassica napus HOM05D006945 ORTHO05D005549 9.8e-25 117.1 137 48.2
AT5G38317 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 1.3e-24 116.7 129 48.8
BcaC08g44188 Brassica carinata HOM05D006945 ORTHO05D005549 1.3e-24 116.7 131 46.6
A03p59420 Brassica napus HOM05D006945 ORTHO05D005549 1.3e-24 116.7 129 47.3
BolC7t46664H Brassica oleracea HOM05D006945 ORTHO05D005549 2.2e-24 115.9 138 47.8
BraA03t14998Z Brassica rapa HOM05D006945 ORTHO05D005549 2.2e-24 115.9 122 46.7
Carub.0007s3775 Capsella rubella HOM05D006945 ORTHO05D005549 2.2e-24 115.9 123 46.3
Thhalv10000699m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 2.4e-23 112.5 113 43.4
Sp7g27880 Schrenkiella parvula HOM05D006945 ORTHO05D005549 7.0e-23 110.9 101 46.5
CARHR214260 Cardamine hirsuta HOM05D006945 ORTHO05D005549 1.6e-22 109.8 95 57.9
BcaNung00513 Brassica carinata HOM05D006945 ORTHO05D005549 1.0e-21 107.1 110 45.5
BcaNung00514 Brassica carinata HOM05D006945 ORTHO05D005549 1.0e-21 107.1 110 45.5
Carub.0007s1058 Capsella rubella HOM05D006945 ORTHO05D005549 1.0e-21 107.1 135 41.5
Carub.0004s0306 Capsella rubella HOM05D006945 ORTHO05D005549 2.3e-21 105.9 128 46.1
A03p65360 Brassica napus HOM05D006945 ORTHO05D005549 6.6e-21 104.4 112 50.0
Carub.0005s0829 Capsella rubella HOM05D006945 ORTHO05D005549 1.5e-20 103.2 127 39.4
Sp5g15500 Schrenkiella parvula HOM05D006945 ORTHO05D005549 1.5e-20 103.2 134 44.8
AT4G30074 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 2.5e-20 102.4 128 36.7
A03p59250 Brassica napus HOM05D006945 ORTHO05D005549 2.5e-20 102.4 123 39.0
A03p60770 Brassica napus HOM05D006945 ORTHO05D005549 2.5e-20 102.4 127 36.2
BraA03t14982Z Brassica rapa HOM05D006945 ORTHO05D005549 2.5e-20 102.4 123 39.0
BraA03t14999Z Brassica rapa HOM05D006945 ORTHO05D005549 5.6e-20 101.3 127 37.0
Sp7g27850 Schrenkiella parvula HOM05D006945 ORTHO05D005549 5.6e-20 101.3 117 45.3
AL7G22130 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 9.5e-20 100.5 120 39.2
C07p57450 Brassica napus HOM05D006945 ORTHO05D005549 9.5e-20 100.5 129 38.0
BolC7t46213H Brassica oleracea HOM05D006945 ORTHO05D005549 9.5e-20 100.5 129 38.0
BcaB03g12630 Brassica carinata HOM05D006945 ORTHO05D005549 1.2e-19 100.1 99 42.4
A08p19440 Brassica napus HOM05D006945 ORTHO05D005549 1.6e-19 99.8 125 40.0
C06p15940 Brassica napus HOM05D006945 ORTHO05D005549 1.6e-19 99.8 127 36.2
C07p58660 Brassica napus HOM05D006945 ORTHO05D005549 1.6e-19 99.8 127 37.0
BolC6t36786H Brassica oleracea HOM05D006945 ORTHO05D005549 1.6e-19 99.8 127 36.2
BolC7t46316H Brassica oleracea HOM05D006945 ORTHO05D005549 1.6e-19 99.8 127 37.0
BraA08t33906Z Brassica rapa HOM05D006945 ORTHO05D005549 1.6e-19 99.8 125 40.0
BcaC02g10382 Brassica carinata HOM05D006945 ORTHO05D005549 2.8e-19 99.0 132 40.9
A03p59430 Brassica napus HOM05D006945 ORTHO05D005549 2.8e-19 99.0 127 37.8
A07p12270 Brassica napus HOM05D006945 ORTHO05D005549 4.7e-19 98.2 113 38.9
A07p12290 Brassica napus HOM05D006945 ORTHO05D005549 4.7e-19 98.2 113 38.9
C06p15950 Brassica napus HOM05D006945 ORTHO05D005549 4.7e-19 98.2 100 45.0
BraA07t29011Z Brassica rapa HOM05D006945 ORTHO05D005549 4.7e-19 98.2 113 38.9
Thhalv10027387m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 4.7e-19 98.2 127 37.8
C03p88930 Brassica napus HOM05D006945 ORTHO05D005549 1.1e-18 97.1 125 38.4
BraA03t15590Z Brassica rapa HOM05D006945 ORTHO05D005549 2.3e-18 95.9 126 44.4
Carub.0007s1053 Capsella rubella HOM05D006945 ORTHO05D005549 6.8e-18 94.4 126 38.9
BcaB03g12631 Brassica carinata HOM05D006945 ORTHO05D005549 1.5e-17 93.2 130 36.2
BcaNung00515 Brassica carinata HOM05D006945 ORTHO05D005549 1.5e-17 93.2 109 40.4
A03p59410 Brassica napus HOM05D006945 ORTHO05D005549 2.0e-17 92.8 126 42.1
BcaC02g10381 Brassica carinata HOM05D006945 ORTHO05D005549 2.6e-17 92.4 132 39.4
A08p19430 Brassica napus HOM05D006945 ORTHO05D005549 2.6e-17 92.4 128 35.9
BraA03t14997Z Brassica rapa HOM05D006945 ORTHO05D005549 2.6e-17 92.4 126 42.1
BraA08t33905Z Brassica rapa HOM05D006945 ORTHO05D005549 2.6e-17 92.4 128 35.9
Sp7g27890 Schrenkiella parvula HOM05D006945 ORTHO05D005549 3.4e-17 92.0 126 36.5
Thhalv10026848m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 7.5e-17 90.9 125 37.6
C07p57430 Brassica napus HOM05D006945 ORTHO05D005549 2.9e-16 89.0 126 41.3
BcaC02g10365 Brassica carinata HOM05D006945 ORTHO05D005549 4.9e-16 88.2 121 37.2
C04p29510 Brassica napus HOM05D006945 ORTHO05D005549 4.9e-16 88.2 109 38.5
Sp7g27900 Schrenkiella parvula HOM05D006945 ORTHO05D005549 4.9e-16 88.2 110 39.1
Rhsim13G0155500 Rhododendron simsii HOM05D006945 ORTHO05D005549 2.4e-15 85.9 133 34.6
BolC3t21204H Brassica oleracea HOM05D006945 ORTHO05D005549 3.2e-15 85.5 127 37.0
Thhalv10026783m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 9.2e-15 84.0 126 36.5
Eucgr.C02228 Eucalyptus grandis HOM05D006945 ORTHO05D005549 1.6e-14 83.2 101 38.6
Eucgr.C02231 Eucalyptus grandis HOM05D006945 ORTHO05D005549 1.6e-14 83.2 101 38.6
BolC4t24502H Brassica oleracea HOM05D006945 ORTHO05D005549 7.8e-14 80.9 109 36.7
Gorai.004G026200 Gossypium raimondii HOM05D009688 ORTHO05D005549 1.7e-13 79.7 132 34.8
Gohir.A08G018500 Gossypium hirsutum HOM05D009688 ORTHO05D005549 6.6e-13 77.8 132 35.6
Gohir.D08G029125 Gossypium hirsutum HOM05D009688 ORTHO05D005549 6.6e-13 77.8 130 33.8
Eucgr.C02226 Eucalyptus grandis HOM05D006945 ORTHO05D005549 8.6e-13 77.4 102 35.3
Eucgr.C02232 Eucalyptus grandis HOM05D006945 ORTHO05D005549 1.5e-12 76.6 102 35.3
Glyma.15G164400 Glycine max HOM05D006945 ORTHO05D005549 1.5e-12 76.6 125 37.6
Gohir.D08G029100 Gossypium hirsutum HOM05D009688 ORTHO05D005549 1.5e-12 76.6 132 33.3
Gorai.004G026300 Gossypium raimondii HOM05D009688 ORTHO05D005549 1.2e-11 73.6 119 33.6
Lj6g0015237 Lotus japonicus HOM05D006945 ORTHO05D005549 1.2e-11 73.6 120 34.2
PGR044G0988 Punica granatum HOM05D006945 ORTHO05D005549 2.1e-11 72.8 130 36.2
Ciclev10010365m.g Citrus clementina HOM05D006945 ORTHO05D005549 2.8e-11 72.4 126 32.5
Medtr2g041360 Medicago truncatula HOM05D009822 ORTHO05D011160 2.3e-10 69.3 126 34.9
FvH4_4g06580 Fragaria vesca HOM05D006945 ORTHO05D005549 4.0e-10 68.6 127 31.5
Eucgr.C02229 Eucalyptus grandis HOM05D006945 ORTHO05D005549 6.8e-10 67.8 96 35.4
FAN17G1318 Fragaria x ananassa HOM05D006945 ORTHO05D005549 1.5e-09 66.6 127 30.7
TPR.G30224 Trifolium pratense HOM05D006945 ORTHO05D005549 2.6e-09 65.9 107 32.7
Rhsim13G0155400 Rhododendron simsii HOM05D006945 ORTHO05D005549 3.4e-09 65.5 131 29.8
AL7G22170 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 4.4e-09 65.1 50 50.0
TPR.G7879 Trifolium pratense HOM05D018581 ORTHO05D005549 1.3e-08 63.5 111 36.9
Psat0s3712g0120 Pisum sativum HOM05D009822 ORTHO05D011160 1.1e-07 60.5 125 35.2
CARHR237980 Cardamine hirsuta HOM05D006945 ORTHO05D005549 5.4e-07 58.2 95 33.7
TPR.G30277 Trifolium pratense HOM05D009822 ORTHO05D011160 2.1e-06 56.2 119 32.8
BcaNung02067 Brassica carinata HOM05D006945 ORTHO05D005549 6.0e-06 54.7 31 71.0
Eucgr.L01935 Eucalyptus grandis HOM05D006945 ORTHO05D005549 6.0e-06 54.7 71 35.2


User provided reference genes

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