Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G19330 Arabidopsis lyrata HOM05D008020 ORTHO05D010140 1.0e-49 199.9 109 100.0
AT5G42290 Arabidopsis thaliana HOM05D008020 ORTHO05D010140 4.7e-39 164.5 111 84.7
Carub.0008s0691 Capsella rubella HOM05D008020 ORTHO05D010140 5.2e-38 161.0 110 79.1
Sp7g08310 Schrenkiella parvula HOM05D008020 ORTHO05D010140 9.7e-37 156.8 111 72.1
CARHR284890 Cardamine hirsuta HOM05D008020 ORTHO05D010140 8.2e-36 153.7 112 79.5
BcaB01g03440 Brassica carinata HOM05D008020 ORTHO05D010140 1.0e-33 146.7 111 77.5
BcaC01g05309 Brassica carinata HOM05D008020 ORTHO05D010140 1.0e-33 146.7 111 68.5
C03p28110 Brassica napus HOM05D008020 ORTHO05D010140 2.9e-33 145.2 111 67.6
BolC3t15181H Brassica oleracea HOM05D008020 ORTHO05D010140 2.9e-33 145.2 111 68.5
Thhalv10028031m.g Eutrema salsugineum HOM05D008020 ORTHO05D010140 5.0e-33 144.4 111 67.6
Thhalv10009649m.g Eutrema salsugineum HOM05D008020 ORTHO05D010140 2.5e-32 142.1 111 65.8
Gohir.A01G106700 Gossypium hirsutum HOM05D008020 ORTHO05D010140 6.3e-20 100.9 109 54.1
Migut.C00948 Erythranthe guttata HOM05D008020 ORTHO05D010140 1.1e-19 100.1 93 61.3
Migut.C00952 Erythranthe guttata HOM05D008020 ORTHO05D010140 1.1e-19 100.1 93 61.3
Gohir.D01G093200 Gossypium hirsutum HOM05D008020 ORTHO05D010140 2.4e-19 99.0 109 54.1
Gorai.002G118600 Gossypium raimondii HOM05D008020 ORTHO05D010140 3.1e-19 98.6 109 55.0
Rhsim06G0008300 Rhododendron simsii HOM05D008020 ORTHO05D010140 5.4e-19 97.8 108 53.7
Thecc.08G057500 Theobroma cacao HOM05D008020 ORTHO05D010140 7.0e-19 97.4 106 53.8
Lsat_1_v5_gn_9_44980 Lactuca sativa HOM05D008020 ORTHO05D010140 1.6e-18 96.3 87 58.6
HanXRQChr15g0492771 Helianthus annuus HOM05D008020 ORTHO05D010140 1.3e-17 93.2 116 50.0
Oeu056212.1 Olea europaea HOM05D008020 ORTHO05D010140 1.3e-17 93.2 110 54.5
COL.COLO4_03997 Corchorus olitorius HOM05D008020 ORTHO05D010140 2.9e-17 92.0 109 49.5
COL.COLO4_00185 Corchorus olitorius HOM05D008020 ORTHO05D010140 5.0e-17 91.3 109 49.5
FvH4_2g37570 Fragaria vesca HOM05D008020 ORTHO05D010140 2.5e-16 89.0 109 47.7
Medtr3g115170 Medicago truncatula HOM05D008020 ORTHO05D010140 3.3e-16 88.6 101 50.5
PSO210G7351 Papaver somniferum HOM05D008020 ORTHO05D010140 4.3e-16 88.2 103 50.5
Cpa.g.sc26.209 Carica papaya HOM05D008020 ORTHO05D010140 5.6e-16 87.8 108 48.1
Actinidia29785 Actinidia chinensis HOM05D008020 ORTHO05D010140 7.3e-16 87.4 108 50.0
Nn6g31749 Nelumbo nucifera HOM05D008020 ORTHO05D010140 1.2e-15 86.7 107 49.5
Os03g0133100 Oryza sativa ssp. japonica HOM05D008020 ORTHO05D010140 1.2e-15 86.7 93 51.6
Aa31LG9G12400 Aethionema arabicum HOM05D008020 ORTHO05D010140 2.1e-15 85.9 109 51.4
ECA232G3495 Erigeron canadensis HOM05D008020 ORTHO05D010140 2.1e-15 85.9 120 46.7
Glyma.04G018700 Glycine max HOM05D008020 ORTHO05D010140 2.8e-15 85.5 88 52.3
FAN15G1770 Fragaria x ananassa HOM05D008020 ORTHO05D010140 3.6e-15 85.1 110 48.2
MD15G1003000 Malus domestica HOM05D008020 ORTHO05D010140 3.6e-15 85.1 86 53.5
TWI56G1414 Tripterygium wilfordii HOM05D008020 ORTHO05D010140 6.1e-15 84.3 109 49.5
Ah.00g000390 Amaranthus hybridus HOM05D008020 ORTHO05D010140 8.0e-15 84.0 126 44.4
MELO3C017014.2 Cucumis melo HOM05D008020 ORTHO05D010140 8.0e-15 84.0 109 49.5
Duzib041G0109 Durio zibethinus HOM05D008020 ORTHO05D010140 8.0e-15 84.0 107 48.6
VMungo1309G2936 Vigna mungo HOM05D008020 ORTHO05D010140 8.0e-15 84.0 98 48.0
Lj1g0023017 Lotus japonicus HOM05D008020 ORTHO05D010140 1.0e-14 83.6 88 51.1
Psat5g011800 Pisum sativum HOM05D008020 ORTHO05D010140 1.0e-14 83.6 101 49.5
Haze_22756 Corylus avellana HOM05D008020 ORTHO05D010140 4.0e-14 81.6 106 48.1
SalBow7G2452 Salvia bowleyana HOM05D008020 ORTHO05D010140 5.2e-14 81.3 83 54.2
TAR625G0930 Trochodendron aralioides HOM05D008020 ORTHO05D010140 6.8e-14 80.9 86 54.7
Glyma.06G019000 Glycine max HOM05D008020 ORTHO05D010140 1.2e-13 80.1 109 45.0
Manes.05G135100 Manihot esculenta HOM05D008020 ORTHO05D010140 1.2e-13 80.1 109 47.7
EL10Ac1g01981 Beta vulgaris HOM05D008020 ORTHO05D010140 1.5e-13 79.7 91 50.5
Phvul.009G021900 Phaseolus vulgaris HOM05D008020 ORTHO05D010140 1.5e-13 79.7 99 45.5
Zm00001eb402590 Zea mays HOM05D008020 ORTHO05D010140 2.0e-13 79.3 91 50.5
ClCG11G018630 Citrullus lanatus HOM05D008020 ORTHO05D010140 2.6e-13 79.0 111 47.7
CDE05G0785 Ceratophyllum demersum HOM05D008020 ORTHO05D010140 4.4e-13 78.2 111 48.6
Eucgr.F03547 Eucalyptus grandis HOM05D008020 ORTHO05D010140 4.4e-13 78.2 86 47.7
Sc26g0004630 Simmondsia chinensis HOM05D008020 ORTHO05D010140 4.4e-13 78.2 111 45.0
ATR0106G002 Amborella trichopoda HOM05D008020 ORTHO05D010140 1.7e-12 76.3 109 48.6
arahy.Tifrunner.gnm1.ann1.IQ4KFY Arachis hypogaea HOM05D008020 ORTHO05D010140 1.7e-12 76.3 104 49.0
Cfa014061 Carpinus fangiana HOM05D008020 ORTHO05D010140 3.7e-12 75.1 83 51.8
Lalb_Chr11g0061691 Lupinus albus HOM05D008020 ORTHO05D010140 3.7e-12 75.1 89 50.6
unitig_0.g2104 Utricularia gibba HOM05D008020 ORTHO05D010140 6.4e-12 74.3 110 51.8
CsaV3_4G037160 Cucumis sativus L. HOM05D008020 ORTHO05D010140 8.3e-12 73.9 81 51.9
RcHm_v2.0_Chr6g0304161 Rosa chinensis HOM05D008020 ORTHO05D010140 1.9e-11 72.8 109 43.1
Ca_15441_v3 Cicer arietinum L. HOM05D008020 ORTHO05D010140 1.2e-10 70.1 109 43.1
SEGI_30631 Sequoiadendron giganteum HOM05D008020 ORTHO05D010140 2.0e-10 69.3 92 47.8
CSS0004036 Camellia sinensis var. sinensis HOM05D008020 ORTHO05D010140 1.0e-09 67.0 90 48.9
AUR62036888 Chenopodium quinoa HOM05D008020 ORTHO05D010140 5.0e-09 64.7 83 47.0
AUR62043558 Chenopodium quinoa HOM05D008020 ORTHO05D010140 5.0e-09 64.7 83 47.0
Atru.chr13.153 Acer truncatum HOM05D008020 ORTHO05D010140 1.9e-08 62.8 83 44.6
AagrBONN_evm.TU.Sc2ySwM_368.1603 Anthoceros agrestis HOM05D008020 ORTHO05D010140 7.3e-08 60.8 91 44.0
Pp3c20_23510 Physcomitrium patens HOM05D008020 ORTHO05D010140 1.6e-07 59.7 88 40.9
CSS0008844 Camellia sinensis var. sinensis HOM05D008020 ORTHO05D010140 4.7e-07 58.2 88 44.3


User provided reference genes

Program Settings