Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G19260 Arabidopsis lyrata HOM05D005571 ORTHO05D006919 4.0e-111 404.8 211 100.0
AT5G42330 Arabidopsis thaliana HOM05D005571 ORTHO05D006919 1.0e-98 363.6 212 91.5
CARHR284960 Cardamine hirsuta HOM05D005571 ORTHO05D006919 4.4e-86 321.6 218 83.5
Carub.0008s0685 Capsella rubella HOM05D005571 ORTHO05D006919 3.2e-76 288.9 217 77.0
Sp6g25100 Schrenkiella parvula HOM05D005571 ORTHO05D006919 5.6e-73 278.1 215 77.2
Thhalv10014687m.g Eutrema salsugineum HOM05D005571 ORTHO05D006919 1.9e-68 263.1 218 75.2
Aa31LG9G12460 Aethionema arabicum HOM05D005571 ORTHO05D006919 2.0e-62 243.0 223 69.5
A03p09420 Brassica napus HOM05D005571 ORTHO05D006919 4.8e-56 221.9 221 65.2
BraA03t10260Z Brassica rapa HOM05D005571 ORTHO05D006919 4.8e-56 221.9 221 65.2
C03p11000 Brassica napus HOM05D005571 ORTHO05D006919 1.4e-55 220.3 216 63.4
BcaB01g05139 Brassica carinata HOM05D005571 ORTHO05D006919 2.4e-55 219.5 216 63.4
BolC3t13569H Brassica oleracea HOM05D005571 ORTHO05D006919 4.0e-55 218.8 225 64.0
BcaB01g04868 Brassica carinata HOM05D005571 ORTHO05D006919 1.0e-53 214.2 219 63.9
BcaB08g36584 Brassica carinata HOM05D005571 ORTHO05D006919 1.6e-51 206.8 227 59.9
THA.LOC104825425 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 7.1e-44 181.4 220 54.1
THA.LOC104813174 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 3.5e-43 179.1 219 54.8
Ciclev10002509m.g Citrus clementina HOM05D005571 ORTHO05D006919 1.8e-39 166.8 217 51.6
Potri.005G250800 Populus trichocarpa HOM05D005571 ORTHO05D006919 2.9e-37 159.5 225 51.6
COL.COLO4_05218 Corchorus olitorius HOM05D005571 ORTHO05D006919 5.0e-37 158.7 225 51.6
Thecc.08G059400 Theobroma cacao HOM05D005571 ORTHO05D006919 2.5e-36 156.4 227 50.2
Sabra05G0194000 Salix brachista HOM05D005571 ORTHO05D006919 6.1e-35 151.8 223 48.4
Duzib116G0932 Durio zibethinus HOM05D005571 ORTHO05D006919 3.0e-34 149.4 228 46.5
BcaC04g18579 Brassica carinata HOM05D005571 ORTHO05D006919 3.9e-34 149.1 226 50.9
C09p56960 Brassica napus HOM05D005571 ORTHO05D006919 3.9e-34 149.1 226 50.9
BolC9t58559H Brassica oleracea HOM05D005571 ORTHO05D006919 3.9e-34 149.1 188 55.3
GSVIVG01008671001 Vitis vinifera HOM05D005571 ORTHO05D006919 6.7e-34 148.3 223 47.5
Sabra02G0007800 Salix brachista HOM05D005571 ORTHO05D006919 1.5e-33 147.1 223 46.2
Duzib093G0863 Durio zibethinus HOM05D005571 ORTHO05D006919 3.3e-33 146.0 227 48.5
TWI56G1114 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 4.8e-32 142.1 229 47.2
Haze_22782 Corylus avellana HOM05D005571 ORTHO05D006919 1.1e-31 141.0 222 45.9
Gohir.D05G182600 Gossypium hirsutum HOM05D005571 ORTHO05D006919 1.4e-31 140.6 234 47.9
Gorai.009G187900 Gossypium raimondii HOM05D005571 ORTHO05D006919 1.4e-31 140.6 234 47.9
Manes.05G133900 Manihot esculenta HOM05D005571 ORTHO05D006919 1.8e-31 140.2 208 47.6
Potri.002G010400 Populus trichocarpa HOM05D005571 ORTHO05D006919 2.4e-31 139.8 227 46.3
Gorai.005G113600 Gossypium raimondii HOM05D005571 ORTHO05D006919 4.1e-31 139.0 210 49.5
CiPaw.08G073400 Carya illinoinensis HOM05D005571 ORTHO05D006919 5.3e-31 138.7 220 44.1
Gohir.A05G179400 Gossypium hirsutum HOM05D005571 ORTHO05D006919 9.1e-31 137.9 234 47.0
PGR083G0609 Punica granatum HOM05D005571 ORTHO05D006919 1.2e-30 137.5 232 44.0
ClCG08G009410 Citrullus lanatus HOM05D005571 ORTHO05D006919 2.0e-30 136.7 224 47.8
CiPaw.07G138600 Carya illinoinensis HOM05D005571 ORTHO05D006919 2.6e-30 136.3 227 47.6
Gohir.D02G100200 Gossypium hirsutum HOM05D005571 ORTHO05D006919 2.6e-30 136.3 210 49.0
Actinidia17042 Actinidia chinensis HOM05D005571 ORTHO05D006919 1.3e-29 134.0 220 46.8
Sed0002015 Sechium edule HOM05D005571 ORTHO05D006919 1.7e-29 133.7 220 44.1
Manes.18G005301 Manihot esculenta HOM05D005571 ORTHO05D006919 2.9e-29 132.9 224 42.4
MELO3C026535.2 Cucumis melo HOM05D005571 ORTHO05D006919 3.8e-29 132.5 225 44.9
Aqoxy6G01708 Aquilegia oxysepala HOM05D005571 ORTHO05D006919 5.0e-29 132.1 229 43.7
A10p20370 Brassica napus HOM05D005571 ORTHO05D006919 1.9e-28 130.2 226 47.3
Glyma.04G017800 Glycine max HOM05D005571 ORTHO05D006919 1.9e-28 130.2 219 42.9
Cfa014080 Carpinus fangiana HOM05D005571 ORTHO05D006919 2.5e-28 129.8 222 44.1
vmacro21809 Vaccinium macrocarpon HOM05D005571 ORTHO05D006919 2.5e-28 129.8 224 43.3
Lj4A11T70 Lonicera japonica HOM05D005571 ORTHO05D006919 3.2e-28 129.4 221 45.2
CSS0029462 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 4.2e-28 129.0 200 47.0
Actinidia15492 Actinidia chinensis HOM05D005571 ORTHO05D006919 5.5e-28 128.6 221 44.8
CsaV3_6G031520 Cucumis sativus L. HOM05D005571 ORTHO05D006919 5.5e-28 128.6 226 44.2
Oeu064631.1 Olea europaea HOM05D005571 ORTHO05D006919 5.5e-28 128.6 221 47.1
Lj1g0015612 Lotus japonicus HOM05D005571 ORTHO05D006919 7.2e-28 128.3 226 45.1
CSS0030992 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 9.4e-28 127.9 226 46.9
TWI12G0392 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 9.4e-28 127.9 229 44.1
Glyma.06G018100 Glycine max HOM05D005571 ORTHO05D006919 2.7e-27 126.3 219 41.1
RcHm_v2.0_Chr6g0304291 Rosa chinensis HOM05D005571 ORTHO05D006919 2.7e-27 126.3 211 46.4
QL02p014184 Quercus lobata HOM05D005571 ORTHO05D006919 4.7e-27 125.6 221 43.4
CAN.G311.116 Capsicum annuum HOM05D005571 ORTHO05D006919 1.8e-26 123.6 229 42.8
Nitab4.5_0000588g0080 Nicotiana tabacum HOM05D005571 ORTHO05D006919 1.8e-26 123.6 230 45.7
Rhsim06G0007100 Rhododendron simsii HOM05D005571 ORTHO05D006919 1.8e-26 123.6 223 42.6
CANSAT25G0564 Cannabis sativa HOM05D005571 ORTHO05D006919 2.3e-26 123.2 218 42.2
TAR628G0603 Trochodendron aralioides HOM05D005571 ORTHO05D006919 3.9e-26 122.5 226 43.8
arahy.Tifrunner.gnm1.ann1.G9B5FS Arachis hypogaea HOM05D005571 ORTHO05D006919 6.7e-26 121.7 228 43.9
Dinv05532 Davidia involucrata HOM05D005571 ORTHO05D006919 8.8e-26 121.3 219 41.6
FvH4_2g37430 Fragaria vesca HOM05D005571 ORTHO05D006919 1.1e-25 120.9 204 49.0
Oeu035840.1 Olea europaea HOM05D005571 ORTHO05D006919 4.4e-25 119.0 214 43.9
Sopen04g035980 Solanum pennellii HOM05D005571 ORTHO05D006919 7.4e-25 118.2 234 43.6
arahy.Tifrunner.gnm1.ann1.VC4QUA Arachis hypogaea HOM05D005571 ORTHO05D006919 9.7e-25 117.9 205 43.9
FAN27G2782 Fragaria x ananassa HOM05D005571 ORTHO05D006919 1.7e-24 117.1 225 45.8
FAN20G2818 Fragaria x ananassa HOM05D005571 ORTHO05D006919 3.7e-24 115.9 225 45.8
VMungo1309G0957 Vigna mungo HOM05D005571 ORTHO05D006919 4.8e-24 115.5 217 44.2
MSTRG.24929 Avicennia marina HOM05D005571 ORTHO05D006919 6.3e-24 115.2 226 44.7
A02p05480 Brassica napus HOM05D005571 ORTHO05D006919 8.2e-24 114.8 141 57.4
BraA02t05499Z Brassica rapa HOM05D005571 ORTHO05D006919 8.2e-24 114.8 141 57.4
FAN15G1374 Fragaria x ananassa HOM05D005571 ORTHO05D006919 8.2e-24 114.8 204 47.1
Medtr3g115300 Medicago truncatula HOM05D005571 ORTHO05D006919 8.2e-24 114.8 227 39.2
Cc10_g00650 Coffea canephora HOM05D005571 ORTHO05D006919 1.4e-23 114.0 230 43.9
Migut.C00385 Erythranthe guttata HOM05D005571 ORTHO05D006919 1.8e-23 113.6 240 41.2
CSS0039739 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 2.4e-23 113.2 199 42.7
PGSC0003DMG400009903 Solanum tuberosum HOM05D005571 ORTHO05D006919 4.1e-23 112.5 225 40.9
Phvul.009G010900 Phaseolus vulgaris HOM05D005571 ORTHO05D006919 7.0e-23 111.7 212 39.6
BcaC03g13663 Brassica carinata HOM05D005571 ORTHO05D006919 9.1e-23 111.3 141 56.0
BNapus_Darmor_BZH_scaffold_38p02630 Brassica napus HOM05D005571 ORTHO05D006919 9.1e-23 111.3 141 56.0
Hma1.2p1_0157F.1_g069390 Hydrangea macrophylla HOM05D005571 ORTHO05D006919 1.2e-22 110.9 225 42.2
Peaxi162Scf00893g00005 Petunia axillaris HOM05D005571 ORTHO05D006919 1.2e-22 110.9 223 42.2
DCAR_009532 Daucus carota HOM05D005571 ORTHO05D006919 2.0e-22 110.2 227 41.9
HanXRQChr06g0183961 Helianthus annuus HOM05D005571 ORTHO05D006919 2.0e-22 110.2 219 41.1
BraA10t44107Z Brassica rapa HOM05D005571 ORTHO05D006919 2.6e-22 109.8 192 45.3
Lalb_Chr23g0265781 Lupinus albus HOM05D005571 ORTHO05D006919 2.6e-22 109.8 197 43.1
TPR.G38112 Trifolium pratense HOM05D005571 ORTHO05D006919 1.3e-21 107.5 200 43.0
Sc02g0009100 Simmondsia chinensis HOM05D005571 ORTHO05D006919 1.7e-21 107.1 215 40.5
Lsat_1_v5_gn_2_4041 Lactuca sativa HOM05D005571 ORTHO05D006919 2.2e-21 106.7 235 41.7
SGA_v2.0_scaffold133G34635 Striga asiatica HOM05D005571 ORTHO05D006919 5.0e-21 105.5 237 40.1
Oeu000692.1 Olea europaea HOM05D005571 ORTHO05D006919 6.5e-21 105.1 206 41.3
EL10Ac1g01953 Beta vulgaris HOM05D005571 ORTHO05D006919 8.5e-21 104.8 210 39.0
SalBow7G0698 Salvia bowleyana HOM05D005571 ORTHO05D006919 1.1e-20 104.4 227 40.5
Cfa012650 Carpinus fangiana HOM05D005571 ORTHO05D006919 1.5e-20 104.0 205 43.4
Ah.11g041150 Amaranthus hybridus HOM05D005571 ORTHO05D006919 4.2e-20 102.4 209 40.7
Atru.chr13.137 Acer truncatum HOM05D005571 ORTHO05D006919 1.2e-19 100.9 160 50.6
MSTRG.977 Avicennia marina HOM05D005571 ORTHO05D006919 2.1e-19 100.1 202 39.1
SalBow5G5667 Salvia bowleyana HOM05D005571 ORTHO05D006919 2.7e-19 99.8 211 42.2
Prupe.1G354300 Prunus persica HOM05D005571 ORTHO05D006919 4.7e-19 99.0 251 37.8
PSO675G2006 Papaver somniferum HOM05D005571 ORTHO05D006919 1.0e-18 97.8 215 37.2
Nn6g31737 Nelumbo nucifera HOM05D005571 ORTHO05D006919 1.8e-18 97.1 218 40.4
unitig_747.g21542 Utricularia gibba HOM05D005571 ORTHO05D006919 1.8e-18 97.1 234 39.7
AUR62040795 Chenopodium quinoa HOM05D005571 ORTHO05D006919 2.3e-18 96.7 215 36.3
Sabra11G0114300 Salix brachista HOM05D005571 ORTHO05D006919 6.7e-18 95.1 137 50.4
Hund01764 Selenicereus undatus HOM05D005571 ORTHO05D006919 6.7e-18 95.1 214 38.3
CSS0038566 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 8.8e-18 94.7 199 40.2
HanXRQChr14g0428071 Helianthus annuus HOM05D005571 ORTHO05D006919 8.8e-18 94.7 224 38.8
PSO541G4697 Papaver somniferum HOM05D005571 ORTHO05D006919 1.5e-17 94.0 215 36.7
Ca_15432_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 2.6e-17 93.2 180 38.3
Ca_15457_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 2.6e-17 93.2 180 38.3
ECA238G3324 Erigeron canadensis HOM05D005571 ORTHO05D007881 7.5e-17 91.7 180 41.7
Psat0s2670g0120 Pisum sativum HOM05D005571 ORTHO05D006919 4.8e-16 89.0 216 38.9
Dinv31944 Davidia involucrata HOM05D005571 ORTHO05D006919 9.1e-15 84.7 205 39.0
Hund05103 Selenicereus undatus HOM05D001348 ORTHO05D002788 7.7e-14 81.6 216 37.0
MBI05_g43168_MAGBIO Magnolia biondii HOM05D005571 ORTHO05D006919 6.5e-13 78.6 223 35.9
SHI42933 Sapria himalayana HOM05D005571 ORTHO05D006919 9.4e-12 74.7 190 32.1
unitig_0.g2084 Utricularia gibba HOM05D005571 ORTHO05D006919 1.8e-10 70.5 198 35.9
CDE05G1909 Ceratophyllum demersum HOM05D005571 ORTHO05D006919 6.8e-10 68.6 178 36.5
Cpa.g.c36471 Carica papaya HOM05D005571 ORTHO05D006919 1.2e-09 67.8 83 55.4
CDE04G0695 Ceratophyllum demersum HOM05D005571 ORTHO05D006919 1.2e-09 67.8 162 34.0
Sc15g0004410 Simmondsia chinensis HOM05D005571 ORTHO05D006919 9.8e-09 64.7 142 35.9
Gohir.A02G084300 Gossypium hirsutum HOM05D005571 ORTHO05D006919 3.5e-06 56.2 136 41.2
Duzib128G0429 Durio zibethinus HOM05D005571 ORTHO05D006919 5.9e-06 55.5 108 41.7


User provided reference genes

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