Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G18360 Arabidopsis lyrata HOM05D006598 ORTHO05D008132 1.8e-201 705.7 349 100.0
Carub.0008s0618 Capsella rubella HOM05D006598 ORTHO05D008132 3.1e-185 651.7 357 91.9
AT5G42760 Arabidopsis thaliana HOM05D006598 ORTHO05D008132 2.0e-184 649.0 329 96.7
Thhalv10003240m.g Eutrema salsugineum HOM05D006598 ORTHO05D008132 1.6e-178 629.4 350 88.3
CARHR181720 Cardamine hirsuta HOM05D006598 ORTHO05D008132 1.2e-176 623.2 342 88.9
BraA06t27693Z Brassica rapa HOM05D006598 ORTHO05D008132 1.9e-174 615.9 336 88.4
BcaC06g31749 Brassica carinata HOM05D006598 ORTHO05D008132 1.2e-173 613.2 348 86.2
A06p48250 Brassica napus HOM05D006598 ORTHO05D008132 1.6e-173 612.8 356 84.8
Sp2g07390 Schrenkiella parvula HOM05D006598 ORTHO05D008132 2.3e-172 609.0 356 84.6
BcaC02g10811 Brassica carinata HOM05D006598 ORTHO05D008132 1.5e-171 606.3 332 88.0
C04p24910 Brassica napus HOM05D006598 ORTHO05D008132 3.3e-171 605.1 353 84.4
BolC4t23991H Brassica oleracea HOM05D006598 ORTHO05D008132 3.3e-171 605.1 353 84.4
Aa31LG9G12810 Aethionema arabicum HOM05D006598 ORTHO05D008132 5.9e-168 594.3 338 85.2
THA.LOC104806941 Tarenaya hassleriana HOM05D006598 ORTHO05D008132 8.5e-151 537.3 334 78.1
COL.COLO4_26313 Corchorus olitorius HOM05D006598 ORTHO05D008132 1.0e-135 487.3 329 70.5
FvH4_2g39790 Fragaria vesca HOM05D006598 ORTHO05D008132 3.8e-135 485.3 325 71.7
FAN20G2142 Fragaria x ananassa HOM05D006598 ORTHO05D008132 8.5e-135 484.2 325 71.7
FAN15G1256 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.5e-134 483.4 325 71.4
FAN27G1472 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.9e-134 483.0 325 71.1
Dinv36084 Davidia involucrata HOM05D006598 ORTHO05D008132 2.1e-133 479.6 341 68.9
Cfa018154 Carpinus fangiana HOM05D006598 ORTHO05D008132 4.7e-133 478.4 325 70.5
Haze_17965 Corylus avellana HOM05D006598 ORTHO05D008132 8.0e-133 477.6 325 70.8
Prupe.1G379200 Prunus persica HOM05D006598 ORTHO05D008132 2.3e-132 476.1 341 68.6
Cpa.g.sc36.79 Carica papaya HOM05D006598 ORTHO05D008132 3.4e-131 472.2 316 71.5
Potri.002G260300 Populus trichocarpa HOM05D006598 ORTHO05D008132 3.4e-131 472.2 320 71.6
CSS0023084 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 7.5e-131 471.1 341 68.0
Duzib116G0116 Durio zibethinus HOM05D006598 ORTHO05D008132 9.8e-131 470.7 319 71.5
Manes.18G026900 Manihot esculenta HOM05D006598 ORTHO05D008132 4.8e-130 468.4 328 68.9
Sabra02G0198100 Salix brachista HOM05D006598 ORTHO05D008132 4.8e-130 468.4 320 71.6
CiPaw.15G078300 Carya illinoinensis HOM05D006598 ORTHO05D008132 1.1e-129 467.2 341 67.4
Atru.chr13.478 Acer truncatum HOM05D006598 ORTHO05D008132 1.8e-129 466.5 341 68.3
Dinv39426 Davidia involucrata HOM05D006598 ORTHO05D008132 2.4e-129 466.1 341 67.7
arahy.Tifrunner.gnm1.ann1.9Y7K4V Arachis hypogaea HOM05D006598 ORTHO05D008132 4.1e-129 465.3 331 67.4
vmacro21641 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 9.1e-129 464.2 338 67.5
QL02p008626 Quercus lobata HOM05D006598 ORTHO05D008132 1.2e-128 463.8 341 66.3
MBI16_g31005_MAGBIO Magnolia biondii HOM05D006598 ORTHO05D008132 1.6e-128 463.4 340 67.1
GSVIVG01009711001 Vitis vinifera HOM05D006598 ORTHO05D008132 1.6e-128 463.4 339 67.8
Glyma.04G032000 Glycine max HOM05D006598 ORTHO05D008132 7.7e-128 461.1 320 68.4
Actinidia38007 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.0e-127 460.7 316 69.3
arahy.Tifrunner.gnm1.ann1.KF7WGB Arachis hypogaea HOM05D006598 ORTHO05D008132 1.0e-127 460.7 321 67.9
Rhsim06G0033600 Rhododendron simsii HOM05D006598 ORTHO05D008132 1.3e-127 460.3 341 66.3
VMungo1309G1899 Vigna mungo HOM05D006598 ORTHO05D008132 1.3e-127 460.3 320 68.1
Ciclev10001322m.g Citrus clementina HOM05D006598 ORTHO05D008132 5.0e-127 458.4 341 66.9
PSO675G7094 Papaver somniferum HOM05D006598 ORTHO05D008132 6.5e-127 458.0 324 68.8
Phvul.009G057800 Phaseolus vulgaris HOM05D006598 ORTHO05D008132 1.9e-126 456.4 320 67.5
Glyma.06G032100 Glycine max HOM05D006598 ORTHO05D008132 2.5e-126 456.1 320 68.1
PSO541G3348 Papaver somniferum HOM05D006598 ORTHO05D008132 4.2e-126 455.3 326 68.4
Eucgr.F01894 Eucalyptus grandis HOM05D006598 ORTHO05D008132 5.5e-126 454.9 316 69.0
Medtr3g111840 Medicago truncatula HOM05D006598 ORTHO05D008132 9.5e-126 454.1 331 65.9
CSS0013932 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.2e-125 453.8 334 68.3
Actinidia15332 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.6e-125 453.4 341 66.6
TAR625G1490 Trochodendron aralioides HOM05D006598 ORTHO05D008132 6.1e-125 451.4 341 66.9
Sed0027447 Sechium edule HOM05D006598 ORTHO05D008132 5.2e-124 448.4 308 69.2
Cc10_g02850 Coffea canephora HOM05D006598 ORTHO05D008132 1.5e-123 446.8 325 65.2
Psat5g017160 Pisum sativum HOM05D006598 ORTHO05D008132 3.4e-123 445.7 327 66.4
Sc02g0006160 Simmondsia chinensis HOM05D006598 ORTHO05D008132 4.4e-123 445.3 331 65.6
Aqoxy6G01111 Aquilegia oxysepala HOM05D006598 ORTHO05D008132 9.8e-123 444.1 318 68.2
CANSAT25G2965 Cannabis sativa HOM05D006598 ORTHO05D008132 9.8e-123 444.1 341 64.5
vmacro04528 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 9.8e-123 444.1 324 66.0
Lj4A39T66 Lonicera japonica HOM05D006598 ORTHO05D008132 1.3e-122 443.7 325 65.8
Lj1g0003551 Lotus japonicus HOM05D006598 ORTHO05D008132 1.3e-122 443.7 319 67.7
Rhsim07G0239600 Rhododendron simsii HOM05D006598 ORTHO05D008132 2.2e-122 443.0 324 65.7
TPR.G12344 Trifolium pratense HOM05D006598 ORTHO05D008132 6.3e-122 441.4 331 64.0
SalBow7G0748 Salvia bowleyana HOM05D006598 ORTHO05D008132 8.3e-122 441.0 331 65.0
Migut.C00732 Erythranthe guttata HOM05D006598 ORTHO05D008132 1.8e-121 439.9 341 63.3
Ca_15516_v3 Cicer arietinum L. HOM05D006598 ORTHO05D008132 1.2e-120 437.2 324 65.1
TWI36G0987 Tripterygium wilfordii HOM05D006598 ORTHO05D008132 2.0e-120 436.4 333 65.2
Lsat_1_v5_gn_4_119301 Lactuca sativa HOM05D006598 ORTHO05D008132 2.7e-120 436.0 308 66.9
MSTRG.25174 Avicennia marina HOM05D006598 ORTHO05D008132 3.5e-120 435.6 343 63.6
ECA232G3558 Erigeron canadensis HOM05D006598 ORTHO05D008132 1.0e-119 434.1 314 65.3
PGR031G2630 Punica granatum HOM05D006598 ORTHO05D008132 1.7e-119 433.3 322 65.8
PGSC0003DMG400003679 Solanum tuberosum HOM05D006598 ORTHO05D008132 2.9e-119 432.6 322 63.4
CAN.G1226.16 Capsicum annuum HOM05D006598 ORTHO05D008132 8.6e-119 431.0 320 63.4
Nitab4.5_0010510g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.9e-118 429.9 317 63.4
Hund26575 Selenicereus undatus HOM05D006598 ORTHO05D008132 9.5e-118 427.6 327 63.9
TAR628G1208 Trochodendron aralioides HOM05D006598 ORTHO05D008132 9.5e-118 427.6 315 67.6
Nitab4.5_0006280g0060 Nicotiana tabacum HOM05D006598 ORTHO05D008132 4.7e-117 425.2 319 62.4
Solyc04g080380.3 Solanum lycopersicum HOM05D006598 ORTHO05D008132 1.4e-116 423.7 322 62.4
Sopen04g033970 Solanum pennellii HOM05D006598 ORTHO05D008132 1.4e-116 423.7 322 62.7
HPP92_018806 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.5e-115 420.2 338 62.1
SGA_v2.0_scaffold54G19518 Striga asiatica HOM05D006598 ORTHO05D008132 4.4e-115 418.7 319 63.3
Thecc.08G027000 Theobroma cacao HOM05D006598 ORTHO05D008132 7.5e-115 417.9 319 66.5
ATR0810G155 Amborella trichopoda HOM05D006598 ORTHO05D008132 4.9e-114 415.2 317 61.2
CDE04G2166 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 5.4e-113 411.8 359 57.9
Lalb_Chr11g0062331 Lupinus albus HOM05D006598 ORTHO05D008132 8.6e-111 404.4 325 63.1
AUR62035446 Chenopodium quinoa HOM05D006598 ORTHO05D008132 1.8e-108 396.7 329 59.6
Ah.11g043150 Amaranthus hybridus HOM05D006598 ORTHO05D008132 2.6e-107 392.9 329 58.7
Nitab4.5_0005730g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 4.7e-101 372.1 324 56.8
Oeu049953.1 Olea europaea HOM05D006598 ORTHO05D008132 1.1e-100 370.9 338 56.8
SEGI_39292 Sequoiadendron giganteum HOM05D006598 ORTHO05D008132 1.9e-97 360.1 330 57.0
Os03g0775000 Oryza sativa ssp. japonica HOM05D006598 ORTHO05D008132 4.7e-93 345.5 305 56.4
CDE06G0448 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 2.3e-92 343.2 298 60.1
Zm00001eb059150 Zea mays HOM05D006598 ORTHO05D008132 3.1e-92 342.8 309 55.0
Pp3c8_2950 Physcomitrium patens HOM05D006598 ORTHO05D008132 6.2e-85 318.5 307 55.0
Pp3c4_6590 Physcomitrium patens HOM05D006598 ORTHO05D008132 5.2e-84 315.5 305 53.8
TAR381G1379 Trochodendron aralioides HOM05D006598 ORTHO05D008132 2.2e-82 310.1 205 73.2
AagrBONN_evm.TU.Sc2ySwM_228.3129 Anthoceros agrestis HOM05D006598 ORTHO05D008132 7.1e-81 305.1 316 49.4
HPP92_018704 Vanilla planifolia HOM05D006598 ORTHO05D008132 3.1e-76 289.7 260 58.5
Nitab4.5_0001091g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 4.2e-73 279.3 201 64.7
Nn5g29606 Nelumbo nucifera HOM05D006598 ORTHO05D008132 5.8e-67 258.8 221 60.6
HanXRQChr16g0508491 Helianthus annuus HOM05D006598 ORTHO05D008132 9.3e-65 251.5 187 62.0
CSS0023478 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 2.1e-64 250.4 159 76.1
unitig_46.g17936 Utricularia gibba HOM05D006598 ORTHO05D008132 1.3e-61 241.1 176 65.9
FAN20G3016 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.1e-60 238.0 132 82.6
HPP92_018786 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.8e-60 237.3 157 70.1
Pp3c12_23400 Physcomitrium patens HOM05D006598 ORTHO05D008132 1.6e-53 214.2 282 46.1
Actinidia29823 Actinidia chinensis HOM05D006598 ORTHO05D008132 9.0e-52 208.4 156 66.0
AUR62039547 Chenopodium quinoa HOM05D006598 ORTHO05D008132 1.9e-46 190.7 245 45.3
HPP92_018785 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.2e-43 181.4 164 57.9
MD15G1027400 Malus domestica HOM05D006598 ORTHO05D008132 2.6e-38 163.7 88 81.8
TAR381G0844 Trochodendron aralioides HOM05D006598 ORTHO05D008132 6.3e-37 159.1 138 62.3
Actinidia22543 Actinidia chinensis HOM05D006598 ORTHO05D008132 2.1e-32 144.1 152 52.6
CSS0032599 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 9.7e-22 108.6 111 51.4
Nitab4.5_0000457g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 7.7e-19 99.0 72 65.3
Actinidia29824 Actinidia chinensis HOM05D006598 ORTHO05D008132 8.5e-18 95.5 120 42.5
MCO09G151 Micromonas commoda HOM05D006598 ORTHO05D008132 5.7e-14 82.8 156 38.5
HanXRQChr09g0268921 Helianthus annuus HOM05D006598 ORTHO05D008132 4.8e-13 79.7 94 46.8
CBR_g22328 Chara braunii HOM05D006598 ORTHO05D008132 7.0e-12 75.9 152 32.2
Cre17.g737650 Chlamydomonas reinhardtii HOM05D038115 ORTHO05D008132 2.6e-06 57.4 175 28.6
Cre16.g677600 Chlamydomonas reinhardtii HOM05D006598 ORTHO05D008132 5.7e-06 56.2 171 28.1


User provided reference genes

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