Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G10780 Arabidopsis lyrata HOM05D000101 ORTHO05D000089 3.2e-60 235.0 124 100.0
CARHR174090 Cardamine hirsuta HOM05D000101 ORTHO05D000089 2.1e-19 99.4 113 50.4
AT5G47260 Arabidopsis thaliana HOM05D000101 ORTHO05D000089 6.1e-19 97.8 113 52.2
A02p31050 Brassica napus HOM05D000011 ORTHO05D000018 5.2e-18 94.7 95 58.9
Carub.0008s0047 Capsella rubella HOM05D000101 ORTHO05D000472 2.2e-16 89.4 111 47.7
BolC2t10945H Brassica oleracea HOM05D000101 ORTHO05D000089 2.5e-12 75.9 102 49.0
Aa31LG2G12240 Aethionema arabicum HOM05D000101 ORTHO05D000089 5.2e-10 68.2 124 36.3
Thhalv10000769m.g Eutrema salsugineum HOM05D000101 ORTHO05D000089 8.8e-10 67.4 111 42.3
Thhalv10024140m.g Eutrema salsugineum HOM05D000101 ORTHO05D000089 3.7e-08 62.0 124 33.9
BcaB02g09946 Brassica carinata HOM05D000101 ORTHO05D000089 4.9e-08 61.6 122 34.4
BolC6t35969H Brassica oleracea HOM05D000101 ORTHO05D000089 8.3e-08 60.8 122 34.4
BolC1t03702H Brassica oleracea HOM05D000101 ORTHO05D000089 1.1e-07 60.5 122 34.4
CARHR049180 Cardamine hirsuta HOM05D000101 ORTHO05D000089 1.4e-07 60.1 124 33.1
BcaC09g49372 Brassica carinata HOM05D000101 ORTHO05D000089 1.8e-07 59.7 122 34.4
C01p37350 Brassica napus HOM05D000101 ORTHO05D000089 1.8e-07 59.7 122 34.4
BraA01t03086Z Brassica rapa HOM05D000101 ORTHO05D000089 1.8e-07 59.7 122 35.2
CARHR049700 Cardamine hirsuta HOM05D000101 ORTHO05D000089 3.1e-07 58.9 111 37.8
Thhalv10017979m.g Eutrema salsugineum HOM05D000101 ORTHO05D000089 3.1e-07 58.9 115 35.7
AT1G63350 Arabidopsis thaliana HOM05D000101 ORTHO05D000089 9.2e-07 57.4 122 36.1
A01p29520 Brassica napus HOM05D000101 ORTHO05D000089 9.2e-07 57.4 122 33.6
CARHR048950 Cardamine hirsuta HOM05D000101 ORTHO05D000089 1.6e-06 56.6 128 33.6
Thhalv10023263m.g Eutrema salsugineum HOM05D000101 ORTHO05D000089 1.6e-06 56.6 121 33.9
Aa31LG1G2920 Aethionema arabicum HOM05D000101 ORTHO05D000089 3.5e-06 55.5 123 32.5
A09p13130 Brassica napus HOM05D000101 ORTHO05D000089 3.5e-06 55.5 115 32.2
BraA09t36959Z Brassica rapa HOM05D000101 ORTHO05D000089 3.5e-06 55.5 115 32.2
Thhalv10023256m.g Eutrema salsugineum HOM05D000101 ORTHO05D000089 4.5e-06 55.1 125 33.6
BcaB03g16340 Brassica carinata HOM05D000101 ORTHO05D000089 5.9e-06 54.7 115 32.2
BcaC01g01510 Brassica carinata HOM05D000101 ORTHO05D000089 7.7e-06 54.3 122 33.6


User provided reference genes

Program Settings