Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL825U10010 Arabidopsis lyrata HOM05D004999 ORTHO05D007513 1.0e-66 256.5 126 100.0
AL4G44920 Arabidopsis lyrata HOM05D004999 ORTHO05D007513 6.6e-61 237.3 123 95.9
AT2G45730 Arabidopsis thaliana HOM05D004999 ORTHO05D007513 6.8e-58 227.3 123 91.1
Thhalv10001448m.g Eutrema salsugineum HOM05D004999 ORTHO05D007513 4.6e-54 214.5 123 83.7
Carub.0004s2839 Capsella rubella HOM05D004999 ORTHO05D007513 1.7e-53 212.6 124 87.1
Sp4g27780 Schrenkiella parvula HOM05D004999 ORTHO05D007513 3.6e-51 204.9 124 81.5
CARHR140980 Cardamine hirsuta HOM05D004999 ORTHO05D007513 2.3e-50 202.2 122 79.5
A04p33990 Brassica napus HOM05D004999 ORTHO05D007513 5.2e-50 201.1 125 80.8
BraA04t18860Z Brassica rapa HOM05D004999 ORTHO05D007513 5.2e-50 201.1 125 80.8
C04p71790 Brassica napus HOM05D004999 ORTHO05D007513 1.2e-49 199.9 127 80.3
BcaB01g03255 Brassica carinata HOM05D004999 ORTHO05D007513 1.2e-46 189.9 125 76.0
BcaC02g07075 Brassica carinata HOM05D004999 ORTHO05D007513 7.8e-46 187.2 128 77.3
BolC4t28677H Brassica oleracea HOM05D004999 ORTHO05D007513 7.8e-46 187.2 128 77.3
A03p25340 Brassica napus HOM05D004999 ORTHO05D007513 7.3e-44 180.6 127 74.0
BcaB02g09016 Brassica carinata HOM05D004999 ORTHO05D007513 9.5e-44 180.3 124 74.2
BraA03t11740Z Brassica rapa HOM05D004999 ORTHO05D007513 2.8e-43 178.7 127 73.2
BcaC01g05108 Brassica carinata HOM05D004999 ORTHO05D007513 8.9e-42 173.7 110 79.1
C03p30250 Brassica napus HOM05D004999 ORTHO05D007513 8.9e-42 173.7 110 79.1
Aa31LG9G12650 Aethionema arabicum HOM05D004999 ORTHO05D007513 1.9e-36 156.0 115 70.4
THA.LOC104806888 Tarenaya hassleriana HOM05D004999 ORTHO05D007513 2.1e-35 152.5 110 69.1
TWI56G0255 Tripterygium wilfordii HOM05D004999 ORTHO05D007513 1.1e-31 140.2 111 62.2
Gohir.A05G186900 Gossypium hirsutum HOM05D004999 ORTHO05D007513 2.7e-30 135.6 120 57.5
Gohir.D05G189800 Gossypium hirsutum HOM05D004999 ORTHO05D007513 2.7e-30 135.6 120 57.5
Lj4A25T52 Lonicera japonica HOM05D004999 ORTHO05D007513 3.5e-30 135.2 109 58.7
TWI36G1418 Tripterygium wilfordii HOM05D004999 ORTHO05D007513 3.5e-30 135.2 112 60.7
Gorai.009G195100 Gossypium raimondii HOM05D004999 ORTHO05D007513 6.0e-30 134.4 120 56.7
SGA_v2.0_scaffold11G05913 Striga asiatica HOM05D004999 ORTHO05D007513 6.0e-30 134.4 117 56.4
PGR083G2044 Punica granatum HOM05D004999 ORTHO05D007513 1.0e-29 133.7 118 62.7
Migut.C00822 Erythranthe guttata HOM05D004999 ORTHO05D007513 2.3e-29 132.5 108 60.2
FvH4_2g38570 Fragaria vesca HOM05D004999 ORTHO05D007513 5.1e-29 131.3 118 60.2
TAR381G0667 Trochodendron aralioides HOM05D004999 ORTHO05D007513 5.1e-29 131.3 110 60.0
COL.COLO4_26158 Corchorus olitorius HOM05D004999 ORTHO05D007513 6.6e-29 131.0 114 57.9
Duzib093G1482 Durio zibethinus HOM05D004999 ORTHO05D007513 6.6e-29 131.0 118 55.9
FAN27G0904 Fragaria x ananassa HOM05D004999 ORTHO05D007513 1.1e-28 130.2 118 59.3
QL02p011429 Quercus lobata HOM05D004999 ORTHO05D007513 1.1e-28 130.2 117 56.4
Manes.05G148301 Manihot esculenta HOM05D004999 ORTHO05D007513 1.5e-28 129.8 108 58.3
Thecc.08G043100 Theobroma cacao HOM05D004999 ORTHO05D007513 1.5e-28 129.8 120 55.8
GSVIVG01009891001 Vitis vinifera HOM05D004999 ORTHO05D007513 1.9e-28 129.4 110 60.0
HanXRQChr14g0430231 Helianthus annuus HOM05D004999 ORTHO05D007513 2.5e-28 129.0 110 57.3
Sed0007289 Sechium edule HOM05D004999 ORTHO05D007513 3.3e-28 128.6 106 61.3
Potri.002G023300 Populus trichocarpa HOM05D004999 ORTHO05D007513 4.3e-28 128.3 111 57.7
Lsat_1_v5_gn_2_8681 Lactuca sativa HOM05D004999 ORTHO05D007513 7.3e-28 127.5 120 54.2
CiPaw.08G065700 Carya illinoinensis HOM05D004999 ORTHO05D007513 9.6e-28 127.1 120 55.8
vmacro21722 Vaccinium macrocarpon HOM05D004999 ORTHO05D007513 1.2e-27 126.7 108 56.5
Atru.chr13.305 Acer truncatum HOM05D004999 ORTHO05D007513 1.6e-27 126.3 120 55.0
Haze_22624 Corylus avellana HOM05D004999 ORTHO05D007513 2.1e-27 125.9 120 55.8
MD08G1013700 Malus domestica HOM05D004999 ORTHO05D007513 2.8e-27 125.6 118 55.1
Prupe.1G366700 Prunus persica HOM05D004999 ORTHO05D007513 2.8e-27 125.6 120 55.8
CANSAT01G2959 Cannabis sativa HOM05D004999 ORTHO05D007513 3.6e-27 125.2 119 56.3
MELO3C011005.2 Cucumis melo HOM05D004999 ORTHO05D007513 3.6e-27 125.2 125 52.0
Cfa013940 Carpinus fangiana HOM05D004999 ORTHO05D007513 4.7e-27 124.8 120 55.0
RcHm_v2.0_Chr6g0302731 Rosa chinensis HOM05D004999 ORTHO05D007513 4.7e-27 124.8 118 57.6
Actinidia15416 Actinidia chinensis HOM05D004999 ORTHO05D007513 6.2e-27 124.4 109 58.7
Actinidia16981 Actinidia chinensis HOM05D004999 ORTHO05D007513 6.2e-27 124.4 111 57.7
FAN15G0085 Fragaria x ananassa HOM05D004999 ORTHO05D007513 6.2e-27 124.4 133 53.4
ClCG08G014370 Citrullus lanatus HOM05D004999 ORTHO05D007513 8.1e-27 124.0 113 54.9
Duzib041G0279 Durio zibethinus HOM05D004999 ORTHO05D007513 8.1e-27 124.0 121 54.5
MBI09_g25164_MAGBIO Magnolia biondii HOM05D004999 ORTHO05D007513 8.1e-27 124.0 111 55.0
Sabra02G0019000 Salix brachista HOM05D004999 ORTHO05D007513 8.1e-27 124.0 111 55.0
Dinv39509 Davidia involucrata HOM05D004999 ORTHO05D007513 1.1e-26 123.6 120 54.2
Cc10_g01760 Coffea canephora HOM05D004999 ORTHO05D007513 1.4e-26 123.2 128 50.8
Rhsim06G0021900 Rhododendron simsii HOM05D004999 ORTHO05D007513 1.4e-26 123.2 108 55.6
MD15G1013300 Malus domestica HOM05D004999 ORTHO05D007513 1.8e-26 122.9 121 54.5
AUR62007769 Chenopodium quinoa HOM05D004999 ORTHO05D007513 2.4e-26 122.5 106 55.7
DCAR_017472 Daucus carota HOM05D004999 ORTHO05D007513 2.4e-26 122.5 104 54.8
CsaV3_2G029460 Cucumis sativus L. HOM05D004999 ORTHO05D007513 3.1e-26 122.1 114 55.3
FAN20G3168 Fragaria x ananassa HOM05D004999 ORTHO05D007513 3.1e-26 122.1 133 52.6
CSS0048815 Camellia sinensis var. sinensis HOM05D004999 ORTHO05D007513 4.0e-26 121.7 107 57.0
unitig_749.g13859 Utricularia gibba HOM05D004999 ORTHO05D007513 4.0e-26 121.7 107 59.8
Nn1g05879 Nelumbo nucifera HOM05D004999 ORTHO05D007513 5.2e-26 121.3 114 54.4
Oeu020873.1 Olea europaea HOM05D004999 ORTHO05D007513 5.2e-26 121.3 122 51.6
AUR62002963 Chenopodium quinoa HOM05D004999 ORTHO05D007513 6.8e-26 120.9 108 55.6
Ciclev10001119m.g Citrus clementina HOM05D004999 ORTHO05D007513 6.8e-26 120.9 101 60.4
SalBow7G4700 Salvia bowleyana HOM05D004999 ORTHO05D007513 8.9e-26 120.6 120 53.3
ECA238G1075 Erigeron canadensis HOM05D004999 ORTHO05D007513 2.0e-25 119.4 122 54.1
Ca_13413_v3 Cicer arietinum L. HOM05D004999 ORTHO05D007513 2.6e-25 119.0 118 53.4
Solyc04g081360.3 Solanum lycopersicum HOM05D004999 ORTHO05D007513 4.4e-25 118.2 117 53.0
Sopen04g034980 Solanum pennellii HOM05D004999 ORTHO05D007513 4.4e-25 118.2 114 54.4
PGSC0003DMG400003779 Solanum tuberosum HOM05D004999 ORTHO05D007513 4.4e-25 118.2 117 53.0
arahy.Tifrunner.gnm1.ann1.A5JBZH Arachis hypogaea HOM05D004999 ORTHO05D007513 5.8e-25 117.9 121 57.0
arahy.Tifrunner.gnm1.ann1.BI3E2S Arachis hypogaea HOM05D004999 ORTHO05D007513 5.8e-25 117.9 121 57.0
Lalb_Chr24g0398721 Lupinus albus HOM05D004999 ORTHO05D007513 5.8e-25 117.9 117 54.7
CAN.G311.21 Capsicum annuum HOM05D004999 ORTHO05D007513 9.9e-25 117.1 104 56.7
Nitab4.5_0001540g0030 Nicotiana tabacum HOM05D004999 ORTHO05D007513 9.9e-25 117.1 112 54.5
Dinv31836 Davidia involucrata HOM05D004999 ORTHO05D007513 1.3e-24 116.7 109 56.0
EL10Ac6g14553 Beta vulgaris HOM05D004999 ORTHO05D007513 3.8e-24 115.2 108 51.9
Hund05204 Selenicereus undatus HOM05D004999 ORTHO05D007513 1.1e-23 113.6 119 50.4
Psat5g146560 Pisum sativum HOM05D004999 ORTHO05D007513 1.4e-23 113.2 129 48.1
Lj5g0025890 Lotus japonicus HOM05D004999 ORTHO05D007513 1.9e-23 112.8 110 57.3
Aqoxy5G01776 Aquilegia oxysepala HOM05D004999 ORTHO05D007513 5.4e-23 111.3 139 44.6
PSO170G1336 Papaver somniferum HOM05D004999 ORTHO05D007513 7.1e-23 110.9 124 50.8
Medtr1g024920 Medicago truncatula HOM05D004999 ORTHO05D007513 9.3e-23 110.5 117 51.3
Sc02g0008530 Simmondsia chinensis HOM05D004999 ORTHO05D007513 9.3e-23 110.5 109 55.0
PSO700G0267 Papaver somniferum HOM05D004999 ORTHO05D007513 1.2e-22 110.2 123 48.8
HPP92_022409 Vanilla planifolia HOM05D004999 ORTHO05D007513 1.6e-22 109.8 110 51.8
HPP92_027505 Vanilla planifolia HOM05D004999 ORTHO05D007513 1.6e-22 109.8 110 51.8
CDE09G1336 Ceratophyllum demersum HOM05D004999 ORTHO05D007513 2.1e-22 109.4 108 53.7
Lj5g0016888 Lotus japonicus HOM05D004999 ORTHO05D007513 3.5e-22 108.6 110 57.3
Ah.04g153930 Amaranthus hybridus HOM05D004999 ORTHO05D007513 8.7e-21 104.0 112 48.2
ATR0767G249 Amborella trichopoda HOM05D004999 ORTHO05D007513 3.3e-20 102.1 112 47.3
Zm00001eb142530 Zea mays HOM05D004999 ORTHO05D007513 6.2e-19 97.8 112 47.3
TPR.G30999 Trifolium pratense HOM05D004999 ORTHO05D007513 2.4e-18 95.9 113 47.8
VMungo0647G0227 Vigna mungo HOM05D004999 ORTHO05D007513 2.4e-18 95.9 128 46.9
Os04g0112300 Oryza sativa ssp. japonica HOM05D004999 ORTHO05D007513 3.1e-18 95.5 108 46.3
Glyma.17G257600 Glycine max HOM05D004999 ORTHO05D007513 1.2e-17 93.6 131 48.1
Phvul.001G007200 Phaseolus vulgaris HOM05D004999 ORTHO05D007513 3.4e-17 92.0 126 45.2
SEGI_05081 Sequoiadendron giganteum HOM05D004999 ORTHO05D007513 1.3e-16 90.1 67 61.2
Eucgr.F01642 Eucalyptus grandis HOM05D004999 ORTHO05D007513 4.2e-15 85.1 89 51.7
Oeu054699.1 Olea europaea HOM05D004999 ORTHO05D007513 4.6e-14 81.6 64 64.1
BolC9t55805H Brassica oleracea HOM05D004999 ORTHO05D040156 1.5e-12 76.6 55 69.1
Mapoly0050s0121 Marchantia polymorpha HOM05D004999 ORTHO05D007513 1.5e-12 76.6 107 38.3
C09p29400 Brassica napus HOM05D004999 ORTHO05D040156 1.9e-12 76.3 55 69.1
Pp3c13_19410 Physcomitrium patens HOM05D004999 ORTHO05D007513 3.3e-12 75.5 107 36.4
AagrBONN_evm.TU.Sc2ySwM_344.355 Anthoceros agrestis HOM05D004999 ORTHO05D007513 2.8e-11 72.4 105 39.0
Peaxi162Scf00438g00629 Petunia axillaris HOM05D004999 ORTHO05D007513 1.8e-10 69.7 102 40.2
SMO367G0765 Selaginella moellendorffii HOM05D004999 ORTHO05D007513 5.8e-09 64.7 101 37.6
C08p30330 Brassica napus HOM05D004999 ORTHO05D007513 9.9e-09 63.9 50 58.0
CAN.G566.39 Capsicum annuum HOM05D004999 ORTHO05D007513 8.4e-08 60.8 106 34.0
C04p06640 Brassica napus HOM05D048016 ORTHO05D041591 2.4e-07 59.3 55 58.2
BolC3t15374H Brassica oleracea HOM05D004999 ORTHO05D007513 2.4e-07 59.3 47 61.7
Cre12.g543100 Chlamydomonas reinhardtii HOM05D004999 ORTHO05D007513 7.1e-07 57.8 101 36.6
TPR.G34334 Trifolium pratense HOM05D004999 ORTHO05D007513 3.5e-06 55.5 92 38.0
BcaB05g21932 Brassica carinata HOM05D006937 ORTHO05D008747 6.0e-06 54.7 29 86.2


User provided reference genes

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